Gene: sya00G217340 (Synedra acus)

Overview top

Gene Identifier
sya00G217340
Transcript Identifier
1361
Gene Type
Coding gene
Location
scaffold00060 : 149563-155554 : negative

Family Information

Homologous gene family
HOM02SEM000498
(77 genes in 26 species)
specific family
Orthologous gene family
ORTHO02SEM000595
(67 genes in 26 species)
specific family

Descriptions

eggnog_description
DNA polymerase

Identifiers

Type Value
GeneName1361-gene

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1904161
IEA
PLAZA Integrative OrthologyDNA synthesis involved in UV-damage excision repair SPBC336.04
GO:0030154
IEA
PLAZA Integrative Orthologycell differentiation FBgn0263600
GO:0044271
IEA
PLAZA Integrative Orthologycellular nitrogen compound biosynthetic process SPAC688.10
GO:0044270
IEA
PLAZA Integrative Orthologycellular nitrogen compound catabolic process YDL102W
GO:0000002
IEA
PLAZA Integrative Orthologymitochondrial genome maintenance SPAC688.10
GO:0048869
IEA
PLAZA Integrative Orthologycellular developmental process FBgn0263600
GO:0007049
IEA
PLAZA Integrative Orthologycell cycle SPBC336.04
GO:0009987
IEA
PLAZA Integrative Orthologycellular process SPAC688.10
GO:0006996
IEA
PLAZA Integrative Orthologyorganelle organization SPAC688.10
GO:1901575
IEA
PLAZA Integrative Orthologyorganic substance catabolic process YDL102W
GO:0044786
IEA
PLAZA Integrative Orthologycell cycle DNA replication SPBC336.04
GO:1901576
IEA
PLAZA Integrative Orthologyorganic substance biosynthetic process SPAC688.10
GO:0032501
IEA
PLAZA Integrative Orthologymulticellular organismal process FBgn0263600
GO:0050896
IEA
PLAZA Integrative Orthologyresponse to stimulus SPAC688.10
GO:0034645
IEA
PLAZA Integrative Orthologycellular macromolecule biosynthetic process SPAC688.10
GO:0032502
IEA
PLAZA Integrative Orthologydevelopmental process FBgn0263600
GO:0071478
IEA
PLAZA Integrative Orthologycellular response to radiation SPBC336.04
GO:0033554
IEA
PLAZA Integrative Orthologycellular response to stress SPAC688.10
GO:0034641
IEA
PLAZA Integrative Orthologycellular nitrogen compound metabolic process SPAC688.10
GO:0034644
IEA
PLAZA Integrative Orthologycellular response to UV SPBC336.04
GO:0044260
IEA
PLAZA Integrative Orthologycellular macromolecule metabolic process SPAC688.10
GO:0044265
IEA
PLAZA Integrative Orthologycellular macromolecule catabolic process YDL102W
GO:0043170
IEA
PLAZA Integrative Orthologymacromolecule metabolic process SPAC688.10
GO:0009058
IEA
PLAZA Integrative Orthologybiosynthetic process SPAC688.10
GO:0048856
IEA
PLAZA Integrative Orthologyanatomical structure development FBgn0263600
GO:0009059
IEA
PLAZA Integrative Orthologymacromolecule biosynthetic process SPAC688.10
GO:0007399
IEA
PLAZA Integrative Orthologynervous system development FBgn0263600
GO:0009056
IEA
PLAZA Integrative Orthologycatabolic process YDL102W
GO:0007275
IEA
PLAZA Integrative Orthologymulticellular organism development FBgn0263600
GO:0009057
IEA
PLAZA Integrative Orthologymacromolecule catabolic process YDL102W
GO:0010224
IEA
PLAZA Integrative Orthologyresponse to UV-B AT1G67500
GO:0104004
IEA
PLAZA Integrative Orthologycellular response to environmental stimulus SPBC336.04
GO:0019438
IEA
PLAZA Integrative Orthologyaromatic compound biosynthetic process SPAC688.10
GO:0010225
IEA
PLAZA Integrative Orthologyresponse to UV-C AT1G67500
GO:0071840
IEA
PLAZA Integrative Orthologycellular component organization or biogenesis SPAC688.10
GO:0034654
IEA
PLAZA Integrative Orthologynucleobase-containing compound biosynthetic process SPAC688.10
GO:0034655
IEA
PLAZA Integrative Orthologynucleobase-containing compound catabolic process YDL102W
GO:0016043
IEA
PLAZA Integrative Orthologycellular component organization SPAC688.10
GO:0048731
IEA
PLAZA Integrative Orthologysystem development FBgn0263600
GO:0006807
IEA
PLAZA Integrative Orthologynitrogen compound metabolic process SPAC688.10
GO:0044248
IEA
PLAZA Integrative Orthologycellular catabolic process YDL102W
GO:0044249
IEA
PLAZA Integrative Orthologycellular biosynthetic process SPAC688.10
GO:0006139
IEA
PLAZA Integrative Orthologynucleobase-containing compound metabolic process SPAC688.10
GO:0006259
IEA
PLAZA Integrative OrthologyDNA metabolic process SPAC688.10
GO:1903459
IEA
PLAZA Integrative Orthologymitotic DNA replication lagging strand elongation SPBC336.04
GO:0046700
IEA
PLAZA Integrative Orthologyheterocycle catabolic process YDL102W
GO:0008152
IEA
PLAZA Integrative Orthologymetabolic process SPAC688.10
GO:0090304
IEA
PLAZA Integrative Orthologynucleic acid metabolic process SPAC688.10
GO:0070914
IEA
PLAZA Integrative OrthologyUV-damage excision repair SPBC336.04
GO:0071214
IEA
PLAZA Integrative Orthologycellular response to abiotic stimulus SPBC336.04
GO:0009628
IEA
PLAZA Integrative Orthologyresponse to abiotic stimulus SPBC336.04
GO:0006401
IEA
EggNOGmapperRNA catabolic process
GO:0044237
IEA
PLAZA Integrative Orthologycellular metabolic process SPAC688.10
GO:0044238
IEA
PLAZA Integrative Orthologyprimary metabolic process SPAC688.10
GO:1903047
IEA
PLAZA Integrative Orthologymitotic cell cycle process SPBC336.04
GO:0019439
IEA
PLAZA Integrative Orthologyaromatic compound catabolic process YDL102W
GO:0071704
IEA
PLAZA Integrative Orthologyorganic substance metabolic process SPAC688.10
GO:0051716
IEA
PLAZA Integrative Orthologycellular response to stimulus SPAC688.10
GO:0007005
IEA
PLAZA Integrative Orthologymitochondrion organization SPAC688.10
GO:0006950
IEA
PLAZA Integrative Orthologyresponse to stress SPAC688.10
GO:1902983
IEA
PLAZA Integrative OrthologyDNA strand elongation involved in mitotic DNA replication SPBC336.04
GO:0043137
IEA
EggNOGmapperDNA replication, removal of RNA primer
GO:0006278
IEA
PLAZA Integrative OrthologyRNA-dependent DNA biosynthetic process YDL102W
GO:0006310
IEA
PLAZA Integrative OrthologyDNA recombination FBgn0002891
GO:0000724
IEA
EggNOGmapperdouble-strand break repair via homologous recombination
GO:0000725
IEA
PLAZA Integrative Orthologyrecombinational repair FBgn0002891
GO:0006271
IEA
PLAZA Integrative OrthologyDNA strand elongation involved in DNA replication SPBC336.04
GO:0022616
IEA
PLAZA Integrative OrthologyDNA strand elongation SPBC336.04
GO:0006273
IEA
EggNOGmapperlagging strand elongation
GO:0070987
IEA
EggNOGmappererror-free translesion synthesis
GO:0019985
IEA
InterProtranslesion synthesis
GO:0018130
IEA
PLAZA Integrative Orthologyheterocycle biosynthetic process SPAC688.10
GO:1902969
IEA
PLAZA Integrative Orthologymitotic DNA replication SPBC336.04
GO:0016070
IEA
PLAZA Integrative OrthologyRNA metabolic process SPBC336.04
GO:0046483
IEA
PLAZA Integrative Orthologyheterocycle metabolic process SPAC688.10
GO:0006302
IEA
PLAZA Integrative Orthologydouble-strand break repair FBgn0002891
GO:0006301
IEA
PLAZA Integrative Orthologypostreplication repair SPAC688.10
GO:0000278
IEA
PLAZA Integrative Orthologymitotic cell cycle SPBC336.04
GO:0009416
IEA
PLAZA Integrative Orthologyresponse to light stimulus SPBC336.04
GO:0009411
IEA
PLAZA Integrative Orthologyresponse to UV SPBC336.04
GO:0042276
IEA
EggNOGmappererror-prone translesion synthesis
GO:0006261
IEA
EggNOGmapperDNA-dependent DNA replication
GO:0006260
IEA
PLAZA Integrative OrthologyDNA replication SPBC336.04
GO:1901362
IEA
PLAZA Integrative Orthologyorganic cyclic compound biosynthetic process SPAC688.10
GO:1901360
IEA
PLAZA Integrative Orthologyorganic cyclic compound metabolic process SPAC688.10
GO:1901361
IEA
PLAZA Integrative Orthologyorganic cyclic compound catabolic process YDL102W
GO:1902296
IEA
PLAZA Integrative OrthologyDNA strand elongation involved in cell cycle DNA replication SPBC336.04
GO:0071482
IEA
PLAZA Integrative Orthologycellular response to light stimulus SPBC336.04
GO:0006725
IEA
PLAZA Integrative Orthologycellular aromatic compound metabolic process SPAC688.10
GO:0006974
IEA
PLAZA Integrative Orthologycellular response to DNA damage stimulus SPAC688.10
GO:0032042
IEA
PLAZA Integrative Orthologymitochondrial DNA metabolic process SPAC688.10
GO:0071897
IEA
PLAZA Integrative OrthologyDNA biosynthetic process SPAC688.10
GO:0071494
IEA
PLAZA Integrative Orthologycellular response to UV-C AT1G67500
GO:0000731
IEA
PLAZA Integrative OrthologyDNA synthesis involved in DNA repair SPAC688.10
GO:1902319
IEA
PLAZA Integrative OrthologyDNA strand elongation involved in nuclear cell cycle DNA replication SPBC336.04
GO:0022008
IEA
PLAZA Integrative Orthologyneurogenesis FBgn0263600
GO:0045005
IEA
PLAZA Integrative OrthologyDNA-dependent DNA replication maintenance of fidelity YDL102W
GO:0009314
IEA
PLAZA Integrative Orthologyresponse to radiation SPBC336.04
GO:0022402
IEA
PLAZA Integrative Orthologycell cycle process SPBC336.04
GO:0033260
IEA
PLAZA Integrative Orthologynuclear DNA replication SPBC336.04
GO:0006281
IEA
InterProDNA repair
GO:0043504
IEA
EggNOGmappermitochondrial DNA repair
GO:0006287
IEA
EggNOGmapperbase-excision repair, gap-filling
GO:0009405
IEA
EggNOGmapperpathogenesis
GO:0090305
IEA
EggNOGmappernucleic acid phosphodiester bond hydrolysis
GO:0033567
IEA
EggNOGmapperDNA replication, Okazaki fragment processing
GO:0006289
IEA
EggNOGmappernucleotide-excision repair
GO:0006284
IEA
EggNOGmapperbase-excision repair
GO:0045004
IEA
EggNOGmapperDNA replication proofreading
GO:0007346
IEA
EggNOGmapperregulation of mitotic cell cycle
GO:0006297
IEA
EggNOGmappernucleotide-excision repair, DNA gap filling

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016787
IEA
PLAZA Integrative Orthologyhydrolase activity SPBC336.04
GO:0097159
IEA
PLAZA Homology (enrichment)organic cyclic compound binding HOM02SEM000498
GO:0008408
IEA
EggNOGmapper3'-5' exonuclease activity
GO:0016779
IEA
PLAZA Integrative Orthologynucleotidyltransferase activity SPBC336.04
GO:0016796
IEA
PLAZA Integrative Orthologyexonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters YDL102W
GO:0016788
IEA
PLAZA Integrative Orthologyhydrolase activity, acting on ester bonds SPBC336.04
GO:0003887
IEA
EggNOGmapperDNA-directed DNA polymerase activity
GO:0003887
IEA
InterProDNA-directed DNA polymerase activity
GO:1901265
IEA
PLAZA Homology (enrichment)nucleoside phosphate binding HOM02SEM000498
GO:0016740
IEA
PLAZA Integrative Orthologytransferase activity SPBC336.04
GO:0004529
IEA
PLAZA Integrative Orthologyexodeoxyribonuclease activity YDL102W
GO:0004527
IEA
PLAZA Integrative Orthologyexonuclease activity SPBC336.04
GO:0003677
IEA
InterProDNA binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0008296
IEA
PLAZA Integrative Orthology3'-5'-exodeoxyribonuclease activity YDL102W
GO:0140097
IEA
PLAZA Integrative Orthologycatalytic activity, acting on DNA SPBC336.04
GO:0004518
IEA
PLAZA Integrative Orthologynuclease activity SPBC336.04
GO:0003824
IEA
PLAZA Integrative Orthologycatalytic activity SPBC336.04
GO:0000166
IEA
InterPronucleotide binding
GO:1901363
IEA
PLAZA Homology (enrichment)heterocyclic compound binding HOM02SEM000498
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding SPBC336.04
GO:0005488
IEA
PLAZA Integrative Orthologybinding SPBC336.04
GO:0034061
IEA
PLAZA Integrative OrthologyDNA polymerase activity SPBC336.04
GO:0016895
IEA
PLAZA Integrative Orthologyexodeoxyribonuclease activity, producing 5'-phosphomonoesters YDL102W
GO:0016772
IEA
PLAZA Integrative Orthologytransferase activity, transferring phosphorus-containing groups SPBC336.04
GO:0004536
IEA
PLAZA Integrative Orthologydeoxyribonuclease activity YDL102W
GO:0036094
IEA
PLAZA Homology (enrichment)small molecule binding HOM02SEM000498

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0044430
IEA
PLAZA Integrative Orthologycytoskeletal part FBgn0263600
GO:0070013
IEA
PLAZA Integrative Orthologyintracellular organelle lumen SPAC688.10
GO:1990234
IEA
PLAZA Integrative Orthologytransferase complex SPBC336.04
GO:0005657
IEA
PLAZA Integrative Orthologyreplication fork SPAC688.10
GO:0044427
IEA
PLAZA Integrative Orthologychromosomal part SPAC688.10
GO:0044424
IEA
PLAZA Integrative Orthologyintracellular part SPAC688.10
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part SPAC688.10
GO:0044428
IEA
PLAZA Integrative Orthologynuclear part SPAC688.10
GO:0016035
IEA
EggNOGmapperzeta DNA polymerase complex
GO:0016035
IEA
InterProzeta DNA polymerase complex
GO:0043601
IEA
PLAZA Integrative Orthologynuclear replisome SPBC336.04
GO:0005654
IEA
EggNOGmappernucleoplasm
GO:1902494
IEA
PLAZA Integrative Orthologycatalytic complex SPBC336.04
GO:0032991
IEA
PLAZA Integrative Orthologyprotein-containing complex SPBC336.04
GO:0032993
IEA
PLAZA Integrative Orthologyprotein-DNA complex SPBC336.04
GO:0000790
IEA
PLAZA Integrative Orthologynuclear chromatin YPL167C
GO:0000785
IEA
PLAZA Integrative Orthologychromatin YPL167C
GO:0000784
IEA
PLAZA Integrative Orthologynuclear chromosome, telomeric region SPBC336.04
GO:0005829
IEA
EggNOGmappercytosol
GO:0000781
IEA
PLAZA Integrative Orthologychromosome, telomeric region SPBC336.04
GO:0042575
IEA
PLAZA Integrative OrthologyDNA polymerase complex SPBC336.04
GO:0015630
IEA
PLAZA Integrative Orthologymicrotubule cytoskeleton FBgn0263600
GO:0005739
IEA
EggNOGmappermitochondrion
GO:0098687
IEA
PLAZA Integrative Orthologychromosomal region SPBC336.04
GO:0005856
IEA
PLAZA Integrative Orthologycytoskeleton FBgn0263600
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm SPAC688.10
GO:0005622
IEA
PLAZA Integrative Orthologyintracellular SPAC688.10
GO:0044464
IEA
PLAZA Integrative Orthologycell part SPAC688.10
GO:0031974
IEA
PLAZA Integrative Orthologymembrane-enclosed lumen SPAC688.10
GO:0005694
IEA
PLAZA Integrative Orthologychromosome SPAC688.10
GO:0044454
IEA
PLAZA Integrative Orthologynuclear chromosome part SPAC688.10
GO:0030894
IEA
PLAZA Integrative Orthologyreplisome SPBC336.04
GO:0031981
IEA
PLAZA Integrative Orthologynuclear lumen SPAC688.10
GO:0005634
IEA
PLAZA Integrative Orthologynucleus SPAC688.10
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part SPAC688.10
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part SPAC688.10
GO:0043232
IEA
PLAZA Integrative Orthologyintracellular non-membrane-bounded organelle SPAC688.10
GO:0043233
IEA
PLAZA Integrative Orthologyorganelle lumen SPAC688.10
GO:0000228
IEA
PLAZA Integrative Orthologynuclear chromosome SPAC688.10
GO:0043596
IEA
EggNOGmappernuclear replication fork
GO:0043231
IEA
PLAZA Integrative Orthologyintracellular membrane-bounded organelle SPAC688.10
GO:0005623
IEA
PLAZA Integrative Orthologycell SPAC688.10
GO:0005875
IEA
PLAZA Integrative Orthologymicrotubule associated complex FBgn0263600
GO:0043227
IEA
PLAZA Integrative Orthologymembrane-bounded organelle SPAC688.10
GO:0043228
IEA
PLAZA Integrative Orthologynon-membrane-bounded organelle SPAC688.10
GO:0043226
IEA
PLAZA Integrative Orthologyorganelle SPAC688.10
GO:0061695
IEA
PLAZA Integrative Orthologytransferase complex, transferring phosphorus-containing groups SPBC336.04
GO:0043625
IEA
EggNOGmapperdelta DNA polymerase complex
GO:0043229
IEA
PLAZA Integrative Orthologyintracellular organelle SPAC688.10

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR030559DNA polymerase zeta catalytic subunit
IPR006134DNA-directed DNA polymerase, family B, multifunctional domain
IPR006172DNA-directed DNA polymerase, family B
IPR018247EF-Hand 1, calcium-binding site
IPR017964DNA-directed DNA polymerase, family B, conserved site
IPR012337Ribonuclease H-like superfamily

No MapMan annotations defined for this gene.
KeggID Description
K02350REV3L, POLZ; DNA polymerase zeta [EC:2.7.7.7]
No chloroplast target sequence found.