Gene: Ec-12_001530 (Ectocarpus siliculosus)

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Gene Identifier
Ec-12_001530
Transcript Identifier
Ec-12_001530.1
Gene Type
Coding gene
Location
chr_12 : 1508114-1530127 : negative

Family Information

Homologous gene family
HOM02SEM000498
(77 genes in 26 species)
specific family
Orthologous gene family
ORTHO02SEM000595
(67 genes in 26 species)
specific family

Descriptions

Identifiers

Type Value
GeneNameEc-12_001530

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
InterProDNA repair
GO:0019985
IEA
InterProtranslesion synthesis
GO:0043504
IEA
PLAZA Integrative Orthologymitochondrial DNA repair SPAC688.10
GO:0033260
IEA
PLAZA Integrative Orthologynuclear DNA replication SPBC336.04
GO:0022402
IEA
PLAZA Integrative Orthologycell cycle process SPBC336.04
GO:0009314
IEA
PLAZA Integrative Orthologyresponse to radiation SPBC336.04
GO:0045005
IEA
PLAZA Integrative OrthologyDNA-dependent DNA replication maintenance of fidelity YDL102W
GO:0022008
IEA
PLAZA Integrative Orthologyneurogenesis FBgn0263600
GO:1902319
IEA
PLAZA Integrative OrthologyDNA strand elongation involved in nuclear cell cycle DNA replication SPBC336.04
GO:0071494
IEA
PLAZA Integrative Orthologycellular response to UV-C AT1G67500
GO:0032042
IEA
PLAZA Integrative Orthologymitochondrial DNA metabolic process SPAC688.10
GO:0071482
IEA
PLAZA Integrative Orthologycellular response to light stimulus SPBC336.04
GO:1902296
IEA
PLAZA Integrative OrthologyDNA strand elongation involved in cell cycle DNA replication SPBC336.04
GO:1901361
IEA
PLAZA Integrative Orthologyorganic cyclic compound catabolic process YDL102W
GO:0006260
IEA
PLAZA Integrative OrthologyDNA replication SPBC336.04
GO:0006261
IEA
PLAZA Integrative OrthologyDNA-dependent DNA replication SPBC336.04
GO:0042276
IEA
PLAZA Integrative Orthologyerror-prone translesion synthesis SPAC688.10
GO:0009411
IEA
PLAZA Integrative Orthologyresponse to UV SPBC336.04
GO:0009416
IEA
PLAZA Integrative Orthologyresponse to light stimulus SPBC336.04
GO:0000278
IEA
PLAZA Integrative Orthologymitotic cell cycle SPBC336.04
GO:0006302
IEA
PLAZA Integrative Orthologydouble-strand break repair FBgn0002891
GO:0016070
IEA
PLAZA Integrative OrthologyRNA metabolic process SPBC336.04
GO:1902969
IEA
PLAZA Integrative Orthologymitotic DNA replication SPBC336.04
GO:0070987
IEA
PLAZA Integrative Orthologyerror-free translesion synthesis SPAC688.10
GO:0006273
IEA
PLAZA Integrative Orthologylagging strand elongation SPBC336.04
GO:0022616
IEA
PLAZA Integrative OrthologyDNA strand elongation SPBC336.04
GO:0006271
IEA
PLAZA Integrative OrthologyDNA strand elongation involved in DNA replication SPBC336.04
GO:0000725
IEA
PLAZA Integrative Orthologyrecombinational repair FBgn0002891
GO:0000724
IEA
PLAZA Integrative Orthologydouble-strand break repair via homologous recombination FBgn0002891
GO:0006310
IEA
PLAZA Integrative OrthologyDNA recombination FBgn0002891
GO:0006278
IEA
PLAZA Integrative OrthologyRNA-dependent DNA biosynthetic process YDL102W
GO:1902983
IEA
PLAZA Integrative OrthologyDNA strand elongation involved in mitotic DNA replication SPBC336.04
GO:0043137
IEA
PLAZA Integrative OrthologyDNA replication, removal of RNA primer YDL102W
GO:0007005
IEA
PLAZA Integrative Orthologymitochondrion organization SPAC688.10
GO:0019439
IEA
PLAZA Integrative Orthologyaromatic compound catabolic process YDL102W
GO:1903047
IEA
PLAZA Integrative Orthologymitotic cell cycle process SPBC336.04
GO:0006401
IEA
PLAZA Integrative OrthologyRNA catabolic process YDL102W
GO:0009628
IEA
PLAZA Integrative Orthologyresponse to abiotic stimulus SPBC336.04
GO:0071214
IEA
PLAZA Integrative Orthologycellular response to abiotic stimulus SPBC336.04
GO:0070914
IEA
PLAZA Integrative OrthologyUV-damage excision repair SPBC336.04
GO:1903459
IEA
PLAZA Integrative Orthologymitotic DNA replication lagging strand elongation SPBC336.04
GO:0046700
IEA
PLAZA Integrative Orthologyheterocycle catabolic process YDL102W
GO:0044248
IEA
PLAZA Integrative Orthologycellular catabolic process YDL102W
GO:0048731
IEA
PLAZA Integrative Orthologysystem development FBgn0263600
GO:0016043
IEA
PLAZA Integrative Orthologycellular component organization SPAC688.10
GO:0034655
IEA
PLAZA Integrative Orthologynucleobase-containing compound catabolic process YDL102W
GO:0010225
IEA
PLAZA Integrative Orthologyresponse to UV-C AT1G67500
GO:0071840
IEA
PLAZA Integrative Orthologycellular component organization or biogenesis SPAC688.10
GO:0104004
IEA
PLAZA Integrative Orthologycellular response to environmental stimulus SPBC336.04
GO:0010224
IEA
PLAZA Integrative Orthologyresponse to UV-B AT1G67500
GO:0009057
IEA
PLAZA Integrative Orthologymacromolecule catabolic process YDL102W
GO:0009056
IEA
PLAZA Integrative Orthologycatabolic process YDL102W
GO:0007275
IEA
PLAZA Integrative Orthologymulticellular organism development FBgn0263600
GO:0007399
IEA
PLAZA Integrative Orthologynervous system development FBgn0263600
GO:0048856
IEA
PLAZA Integrative Orthologyanatomical structure development FBgn0263600
GO:0044265
IEA
PLAZA Integrative Orthologycellular macromolecule catabolic process YDL102W
GO:0034644
IEA
PLAZA Integrative Orthologycellular response to UV SPBC336.04
GO:0071478
IEA
PLAZA Integrative Orthologycellular response to radiation SPBC336.04
GO:0032502
IEA
PLAZA Integrative Orthologydevelopmental process FBgn0263600
GO:0032501
IEA
PLAZA Integrative Orthologymulticellular organismal process FBgn0263600
GO:1901575
IEA
PLAZA Integrative Orthologyorganic substance catabolic process YDL102W
GO:0044786
IEA
PLAZA Integrative Orthologycell cycle DNA replication SPBC336.04
GO:0006996
IEA
PLAZA Integrative Orthologyorganelle organization SPAC688.10
GO:0007049
IEA
PLAZA Integrative Orthologycell cycle SPBC336.04
GO:0048869
IEA
PLAZA Integrative Orthologycellular developmental process FBgn0263600
GO:0000002
IEA
PLAZA Integrative Orthologymitochondrial genome maintenance SPAC688.10
GO:0044270
IEA
PLAZA Integrative Orthologycellular nitrogen compound catabolic process YDL102W
GO:0030154
IEA
PLAZA Integrative Orthologycell differentiation FBgn0263600
GO:1904161
IEA
PLAZA Integrative OrthologyDNA synthesis involved in UV-damage excision repair SPBC336.04

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0008408
IEA
InterPro3'-5' exonuclease activity
GO:0000166
IEA
InterPronucleotide binding
GO:0003677
IEA
InterProDNA binding
GO:0003887
IEA
InterProDNA-directed DNA polymerase activity
GO:0004536
IEA
PLAZA Integrative Orthologydeoxyribonuclease activity YDL102W
GO:0016895
IEA
PLAZA Integrative Orthologyexodeoxyribonuclease activity, producing 5'-phosphomonoesters YDL102W
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding SPBC336.04
GO:0008296
IEA
PLAZA Integrative Orthology3'-5'-exodeoxyribonuclease activity YDL102W
GO:0004529
IEA
PLAZA Integrative Orthologyexodeoxyribonuclease activity YDL102W
GO:0016796
IEA
PLAZA Integrative Orthologyexonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters YDL102W

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016035
IEA
InterProzeta DNA polymerase complex
GO:0043625
IEA
PLAZA Integrative Orthologydelta DNA polymerase complex SPBC336.04
GO:0043228
IEA
PLAZA Integrative Orthologynon-membrane-bounded organelle SPAC688.10
GO:0005875
IEA
PLAZA Integrative Orthologymicrotubule associated complex FBgn0263600
GO:0043227
IEA
PLAZA Integrative Orthologymembrane-bounded organelle SPAC688.10
GO:0043231
IEA
PLAZA Integrative Orthologyintracellular membrane-bounded organelle SPAC688.10
GO:0043596
IEA
PLAZA Integrative Orthologynuclear replication fork SPAC688.10
GO:0043233
IEA
PLAZA Integrative Orthologyorganelle lumen SPAC688.10
GO:0000228
IEA
PLAZA Integrative Orthologynuclear chromosome SPAC688.10
GO:0043232
IEA
PLAZA Integrative Orthologyintracellular non-membrane-bounded organelle SPAC688.10
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part SPAC688.10
GO:0005634
IEA
PLAZA Integrative Orthologynucleus SPAC688.10
GO:0031981
IEA
PLAZA Integrative Orthologynuclear lumen SPAC688.10
GO:0030894
IEA
PLAZA Integrative Orthologyreplisome SPBC336.04
GO:0044454
IEA
PLAZA Integrative Orthologynuclear chromosome part SPAC688.10
GO:0005694
IEA
PLAZA Integrative Orthologychromosome SPAC688.10
GO:0031974
IEA
PLAZA Integrative Orthologymembrane-enclosed lumen SPAC688.10
GO:0005856
IEA
PLAZA Integrative Orthologycytoskeleton FBgn0263600
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm SPAC688.10
GO:0098687
IEA
PLAZA Integrative Orthologychromosomal region SPBC336.04
GO:0005739
IEA
PLAZA Integrative Orthologymitochondrion YPL167C
GO:0015630
IEA
PLAZA Integrative Orthologymicrotubule cytoskeleton FBgn0263600
GO:0000781
IEA
PLAZA Integrative Orthologychromosome, telomeric region SPBC336.04
GO:0005829
IEA
PLAZA Integrative Orthologycytosol SPAC688.10
GO:0000785
IEA
PLAZA Integrative Orthologychromatin YPL167C
GO:0000784
IEA
PLAZA Integrative Orthologynuclear chromosome, telomeric region SPBC336.04
GO:0000790
IEA
PLAZA Integrative Orthologynuclear chromatin YPL167C
GO:0032993
IEA
PLAZA Integrative Orthologyprotein-DNA complex SPBC336.04
GO:0043601
IEA
PLAZA Integrative Orthologynuclear replisome SPBC336.04
GO:0005654
IEA
PLAZA Integrative Orthologynucleoplasm ENSG00000009413
GO:0044428
IEA
PLAZA Integrative Orthologynuclear part SPAC688.10
GO:0044427
IEA
PLAZA Integrative Orthologychromosomal part SPAC688.10
GO:0005657
IEA
PLAZA Integrative Orthologyreplication fork SPAC688.10
GO:0070013
IEA
PLAZA Integrative Orthologyintracellular organelle lumen SPAC688.10
GO:0044430
IEA
PLAZA Integrative Orthologycytoskeletal part FBgn0263600

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR023211DNA polymerase, palm domain superfamily
IPR012337Ribonuclease H-like superfamily
IPR030559DNA polymerase zeta catalytic subunit
IPR025687C4-type zinc-finger of DNA polymerase delta
IPR006133DNA-directed DNA polymerase, family B, exonuclease domain
IPR006134DNA-directed DNA polymerase, family B, multifunctional domain
IPR017964DNA-directed DNA polymerase, family B, conserved site
IPR006172DNA-directed DNA polymerase, family B

No MapMan annotations defined for this gene.
KeggID Description
K02350REV3L, POLZ; DNA polymerase zeta [EC:2.7.7.7]
No chloroplast target sequence found.