Gene: Zjn_sc00027.1.g06000.1.am.mkhc

General Information

Structural Information

  • Species Zoysia japonica ssp. nagirizaki
  • Gene Identifier Zjn_sc00027.1.g06000.1.am.mkhc
  • Transcript Identifier Zjn_sc00027.1.g06000.1.am.mkhc
  • Gene Type Coding gene
  • Location Zjn_sc00027.1 : 2476758-2484131 : negative

Gene Family Information

  • ID HOM05M002690
  • #Genes/#Species 138/53
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032968
IEA
InterPropositive regulation of transcription elongation from RNA polymerase II promoter
GO:0006139
ISO
PLAZA Homology (enrichment)nucleobase-containing compound metabolic process HOM05M002690
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G63210

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G65440

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G65440
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G65440

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR035018 Spt6, SH2 domain, C terminus
IPR036860 SH2 domain superfamily
IPR023323 Tex-like domain superfamily
IPR028083 Spt6 acidic, N-terminal domain
IPR017072 Transcription elongation factor Spt6
IPR035420 Spt6, SH2 domain
IPR023319 Tex-like protein, HTH domain superfamily
IPR035019 Spt6, SH2 domain, N terminus
Mapman id Description
15.3.5.4.1 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.SPT6-IWS1 transcription elongation complex.component SPT6