Gene: Seita.4G249600

General Information

Structural Information

Species Setaria italica
Gene Identifier Seita.4G249600
Transcript Identifier Seita.4G249600.1
Gene Type Coding gene
Location scaffold_4 : 37109648-37111452 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05M003658
#Genes/#Species 105/52
Phylogenetic origin

ID ORTHO05M004433
#Genes/#Species 103/52
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

id Seita.4G249600.v2.2
pacid 32706178
alias Si006737m.g

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from zma)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0042273	ISO	PLAZA Integrative Orthology	ribosomal large subunit biogenesis	AT2G24500
GO:0006355	ISO	PLAZA Integrative Orthology	regulation of transcription, DNA-templated	AT2G24500
GO:0009631	ISO	PLAZA Integrative Orthology	cold acclimation	AT2G24500
GO:0006364	ISO	PLAZA Integrative Orthology	rRNA processing	AT2G24500
GO:0090070	ISO	PLAZA Integrative Orthology	positive regulation of ribosome biogenesis	AT2G24500

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT2G24500
GO:0000976	ISO	PLAZA Integrative Orthology	transcription cis-regulatory region binding	AT2G24500

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT2G24500
GO:0005737	ISO	PLAZA Integrative Orthology	cytoplasm	AT2G24500
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT2G24500

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR041661	ZN622/Rei1/Reh1, zinc finger C2H2-type
IPR040025	Zinc finger protein 622/Rei1/Reh1
IPR036236	Zinc finger C2H2 superfamily
IPR013087	Zinc finger C2H2-type

Mapman id	Description
17.1.2.2.3.2	Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.60S ribosomal subunit cytoplasmic maturation.maturation factor (REIL)