Gene: Seita.4G046800

General Information

Structural Information

Species Setaria italica
Gene Identifier Seita.4G046800
Transcript Identifier Seita.4G046800.1
Gene Type Coding gene
Location scaffold_4 : 3467239-3469605 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05M000001
#Genes/#Species 19167/52
Phylogenetic origin

ID ORTHO05M000003
#Genes/#Species 9455/48
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

id Seita.4G046800.v2.2
pacid 32708580
alias Si005891m.g

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from zma)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0080156	ISO	PLAZA Integrative Orthology	mitochondrial mRNA modification	AT4G30700
GO:0000963	ISO	PLAZA Integrative Orthology	mitochondrial RNA processing	AT4G30700
GO:0016554	ISO	PLAZA Integrative Orthology	cytidine to uridine editing	AT4G30700

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0008270	IEA	InterPro	zinc ion binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT4G30700
GO:0005739	ISO	PLAZA Integrative Orthology	mitochondrion	AT4G30700

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR011990	Tetratricopeptide-like helical domain superfamily
IPR002885	Pentatricopeptide repeat
IPR032867	DYW domain

Mapman id	Description
16.11.3.3.4.22	RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (MEF29)