Functional clusters
Information
- Type InterPro
- Description Ethylene-responsive transcription factor
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aegilops tauschii | 4D | 5 | CH_ata_508 | 3 | 3 | 0.000130903 |
| Aegilops tauschii | 6D | 5 | CH_ata_666 | 3 | 4 | 0.000523038 |
| Aegilops tauschii | 2D | 5 | CH_ata_86 | 6 | 7 | 0.00000000000252946 |
| Arabidopsis thaliana | Chr3 | 5 | CH_ath_284 | 3 | 3 | 0.00000189602 |
| Amborella trichopoda | AmTr_v1.0_scaffold00010 | 5 | CH_atr_296 | 3 | 3 | 0.00000530131 |
| Amborella trichopoda | AmTr_v1.0_scaffold00009 | 5 | CH_atr_327 | 3 | 4 | 0.0000211962 |
| Brachypodium distachyon | Bd3 | 5 | CH_bdi_357 | 3 | 3 | 0.0000341357 |
| Cenchrus purpureus | GWHAORA00000002 | 5 | CH_cpu_1042 | 7 | 80 | 0.0000116066 |
| Cenchrus purpureus | GWHAORA00000012 | 5 | CH_cpu_1364 | 5 | 30 | 0.000179209 |
| Cenchrus purpureus | GWHAORA00000002 | 5 | CH_cpu_1497 | 4 | 12 | 0.000356245 |
| Cenchrus purpureus | GWHAORA00000003 | 5 | CH_cpu_1521 | 3 | 3 | 0.000402589 |
| Cenchrus purpureus | GWHAORA00000005 | 5 | CH_cpu_790 | 4 | 4 | 0.000000728088 |
| Digitaria exilis | Dexi_CM05836_chr02A | 5 | CH_dex_1012 | 6 | 74 | 0.000075502 |
| Digitaria exilis | Dexi_CM05836_chr08A | 5 | CH_dex_1129 | 3 | 3 | 0.00017146 |
| Digitaria exilis | Dexi_CM05836_chr09B | 5 | CH_dex_587 | 4 | 4 | 0.000000237813 |
| Digitaria exilis | Dexi_CM05836_chr09A | 5 | CH_dex_681 | 4 | 5 | 0.00000118774 |
| Digitaria exilis | Dexi_CM05836_chr02B | 5 | CH_dex_914 | 6 | 63 | 0.0000280487 |
| Eragrostis curvula | 1 | 5 | CH_ecu_1127 | 3 | 4 | 0.0000643706 |
| Eragrostis curvula | 2 | 5 | CH_ecu_1128 | 3 | 4 | 0.0000643706 |
| Eragrostis curvula | 5 | 5 | CH_ecu_1129 | 3 | 4 | 0.0000643706 |
| Glycine max | Gm03 | 5 | CH_gma_149 | 6 | 9 | 0.0000000000445841 |
| Glycine max | Gm10 | 5 | CH_gma_358 | 4 | 4 | 0.000000259459 |
| Glycine max | Gm19 | 5 | CH_gma_359 | 4 | 4 | 0.000000259459 |
| Glycine max | Gm03 | 5 | CH_gma_360 | 4 | 4 | 0.000000259459 |
| Glycine max | Gm10 | 5 | CH_gma_689 | 3 | 3 | 0.000177547 |
| Glycine max | Gm09 | 5 | CH_gma_690 | 3 | 3 | 0.000177547 |
| Glycine max | Gm20 | 5 | CH_gma_691 | 3 | 3 | 0.000177547 |
| Glycine max | Gm13 | 5 | CH_gma_82 | 7 | 9 | 0.0000000000000268687 |
| Hordeum vulgare | chr6H | 5 | CH_hvu_421 | 6 | 63 | 0.00000519521 |
| Hordeum vulgare | chr6H | 5 | CH_hvu_568 | 3 | 3 | 0.0000684848 |
| Lolium perenne | Lp_chr4_0 | 5 | CH_lpe_111 | 6 | 17 | 0.0000000000670495 |
| Lolium perenne | Lp_chr2_0 | 5 | CH_lpe_237 | 4 | 5 | 0.0000000675868 |
| Lolium perenne | Lp_chr6_0 | 5 | CH_lpe_409 | 4 | 15 | 0.0000183536 |
| Magnolia biondii | Chr18 | 5 | CH_mbi_699 | 4 | 29 | 0.0000313899 |
| Miscanthus sinensis | Chr02 | 5 | CH_msi_1115 | 3 | 4 | 0.000730028 |
| Oryza alta | GWHAZTO00000016 | 5 | CH_oal_1510 | 3 | 4 | 0.00037031 |
| Oryza alta | GWHAZTO00000003 | 5 | CH_oal_496 | 4 | 4 | 0.0000000886803 |
| Oryza alta | GWHAZTO00000001 | 5 | CH_oal_745 | 4 | 7 | 0.00000309667 |
| Oryza sativa ssp. indica | Chr3 | 5 | CH_osaindica_728 | 3 | 5 | 0.00085157 |
| Oryza sativa Kitaake | Chr3 | 5 | CH_osak_469 | 4 | 7 | 0.00000505246 |
| Oropetium thomaeum | Chromosome_4 | 5 | CH_oth_226 | 3 | 3 | 0.0000694667 |
| Phyllostachys edulis | hic_scaffold_3 | 5 | CH_ped_366 | 4 | 4 | 0.000000646104 |
| Phyllostachys edulis | hic_scaffold_21 | 5 | CH_ped_367 | 4 | 4 | 0.000000646104 |
| Phyllostachys edulis | hic_scaffold_10 | 5 | CH_ped_494 | 4 | 6 | 0.00000966244 |
| Panicum hallii | Chr09 | 5 | CH_pha_261 | 4 | 4 | 0.000000159389 |
| Panicum hallii | Chr08 | 5 | CH_pha_520 | 3 | 3 | 0.000111946 |
| Populus trichocarpa | Chr14 | 5 | CH_ptr_176 | 5 | 5 | 0.0000000000482049 |
| Populus trichocarpa | Chr02 | 5 | CH_ptr_297 | 4 | 4 | 0.0000000476526 |
| Populus trichocarpa | Chr05 | 5 | CH_ptr_521 | 3 | 3 | 0.0000457994 |
| Populus trichocarpa | Chr08 | 5 | CH_ptr_522 | 3 | 3 | 0.0000457994 |
| Populus trichocarpa | Chr10 | 5 | CH_ptr_639 | 3 | 4 | 0.000183049 |
| Sorghum bicolor | Chr06 | 5 | CH_sbi_202 | 5 | 6 | 0.00000000222972 |
| Sorghum bicolor | Chr01 | 5 | CH_sbi_728 | 3 | 4 | 0.000603553 |
| Secale cereale | GWHASIY00000002 | 5 | CH_sce_197 | 6 | 9 | 0.0000000000441681 |
| Secale cereale | GWHASIY00000002 | 5 | CH_sce_245 | 5 | 5 | 0.000000000362229 |
| Sequoiadendron giganteum | chr4 | 5 | CH_sgi_1901 | 3 | 3 | 0.0000655864 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_1902 | 3 | 3 | 0.0000655864 |
| Sequoiadendron giganteum | chr4 | 5 | CH_sgi_2516 | 3 | 5 | 0.00065473 |
| Sequoiadendron giganteum | chr4 | 5 | CH_sgi_84 | 12 | 15 | 3.59599e-29 |
| Sequoiadendron giganteum | chr9 | 5 | CH_sgi_956 | 5 | 10 | 0.0000000202075 |
| Setaria italica | scaffold_9 | 5 | CH_sit_368 | 4 | 4 | 0.000000349477 |
| Setaria italica | scaffold_8 | 5 | CH_sit_710 | 3 | 3 | 0.000200687 |
| Setaria italica | scaffold_1 | 5 | CH_sit_711 | 3 | 3 | 0.000200687 |
| Solanum lycopersicum | SL4.0ch01 | 5 | CH_sly_221 | 5 | 8 | 0.00000000478517 |
| Solanum lycopersicum | SL4.0ch09 | 5 | CH_sly_635 | 3 | 3 | 0.0000637738 |
| Solanum lycopersicum | SL4.0ch09 | 5 | CH_sly_636 | 3 | 3 | 0.0000637738 |
| Solanum lycopersicum | SL4.0ch03 | 5 | CH_sly_637 | 3 | 3 | 0.0000637738 |
| Setaria viridis | Chr_09 | 5 | CH_svi_351 | 4 | 4 | 0.000000222422 |
| Setaria viridis | Chr_08 | 5 | CH_svi_833 | 3 | 4 | 0.000587249 |
| Triticum aestivum | Chr6D | 5 | CH_tae_1514 | 4 | 5 | 0.00000361777 |
| Triticum aestivum | Chr4A | 5 | CH_tae_1515 | 4 | 5 | 0.00000361777 |
| Triticum aestivum | Chr4D | 5 | CH_tae_1516 | 4 | 5 | 0.00000361777 |
| Triticum aestivum | Chr2D | 5 | CH_tae_1670 | 4 | 6 | 0.0000108394 |
| Triticum aestivum | Chr2B | 5 | CH_tae_2417 | 3 | 3 | 0.000452959 |
| Triticum aestivum | Chr1B | 5 | CH_tae_2418 | 3 | 3 | 0.000452959 |
| Triticum aestivum | Chr4B | 5 | CH_tae_733 | 5 | 5 | 0.00000000115201 |
| Triticum dicoccoides | 6A | 5 | CH_tdi_1014 | 3 | 3 | 0.000201044 |
| Triticum dicoccoides | 6B | 5 | CH_tdi_1015 | 3 | 3 | 0.000201044 |
| Triticum dicoccoides | 4A | 5 | CH_tdi_452 | 4 | 4 | 0.000000283488 |
| Triticum dicoccoides | 4B | 5 | CH_tdi_453 | 4 | 4 | 0.000000283488 |
| Triticum turgidum | chr2A | 5 | CH_ttu_1141 | 3 | 3 | 0.0001964 |
| Triticum turgidum | chr1A | 5 | CH_ttu_1142 | 3 | 3 | 0.0001964 |
| Triticum turgidum | chr6A | 5 | CH_ttu_1143 | 3 | 3 | 0.0001964 |
| Triticum turgidum | chr6B | 5 | CH_ttu_1144 | 3 | 3 | 0.0001964 |
| Triticum turgidum | chr4A | 5 | CH_ttu_1145 | 3 | 3 | 0.0001964 |
| Triticum turgidum | chr4B | 5 | CH_ttu_538 | 4 | 4 | 0.000000279295 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00003.1 | 5 | CH_zjn_122 | 4 | 4 | 0.000000194895 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00002.1 | 5 | CH_zjn_151 | 4 | 5 | 0.00000097342 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00051.1 | 5 | CH_zjn_152 | 4 | 5 | 0.00000097342 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00004.1 | 5 | CH_zjn_224 | 4 | 8 | 0.0000135836 |
| Aegilops tauschii | 4D | 6 | CH_ata_508 | 3 | 3 | 0.000130903 |
| Aegilops tauschii | 6D | 6 | CH_ata_666 | 3 | 4 | 0.000523038 |
| Aegilops tauschii | 2D | 6 | CH_ata_86 | 6 | 7 | 0.00000000000252946 |
| Arabidopsis thaliana | Chr3 | 6 | CH_ath_284 | 3 | 3 | 0.00000189602 |
| Amborella trichopoda | AmTr_v1.0_scaffold00010 | 6 | CH_atr_296 | 3 | 3 | 0.00000530131 |
| Amborella trichopoda | AmTr_v1.0_scaffold00009 | 6 | CH_atr_327 | 3 | 4 | 0.0000211962 |
| Brachypodium distachyon | Bd3 | 6 | CH_bdi_357 | 3 | 3 | 0.0000341357 |
| Cenchrus purpureus | GWHAORA00000002 | 6 | CH_cpu_1042 | 7 | 80 | 0.0000116066 |
| Cenchrus purpureus | GWHAORA00000012 | 6 | CH_cpu_1364 | 5 | 30 | 0.000179209 |
| Cenchrus purpureus | GWHAORA00000002 | 6 | CH_cpu_1497 | 4 | 12 | 0.000356245 |
| Cenchrus purpureus | GWHAORA00000003 | 6 | CH_cpu_1521 | 3 | 3 | 0.000402589 |
| Cenchrus purpureus | GWHAORA00000005 | 6 | CH_cpu_790 | 4 | 4 | 0.000000728088 |
| Digitaria exilis | Dexi_CM05836_chr02A | 6 | CH_dex_1012 | 6 | 74 | 0.000075502 |
| Digitaria exilis | Dexi_CM05836_chr08A | 6 | CH_dex_1129 | 3 | 3 | 0.00017146 |
| Digitaria exilis | Dexi_CM05836_chr09B | 6 | CH_dex_587 | 4 | 4 | 0.000000237813 |
| Digitaria exilis | Dexi_CM05836_chr09A | 6 | CH_dex_681 | 4 | 5 | 0.00000118774 |
| Digitaria exilis | Dexi_CM05836_chr02B | 6 | CH_dex_914 | 6 | 63 | 0.0000280487 |
| Eragrostis curvula | 1 | 6 | CH_ecu_1127 | 3 | 4 | 0.0000643706 |
| Eragrostis curvula | 2 | 6 | CH_ecu_1128 | 3 | 4 | 0.0000643706 |
| Eragrostis curvula | 5 | 6 | CH_ecu_1129 | 3 | 4 | 0.0000643706 |
| Glycine max | Gm03 | 6 | CH_gma_149 | 6 | 9 | 0.0000000000445841 |
| Glycine max | Gm10 | 6 | CH_gma_358 | 4 | 4 | 0.000000259459 |
| Glycine max | Gm19 | 6 | CH_gma_359 | 4 | 4 | 0.000000259459 |
| Glycine max | Gm03 | 6 | CH_gma_360 | 4 | 4 | 0.000000259459 |
| Glycine max | Gm10 | 6 | CH_gma_689 | 3 | 3 | 0.000177547 |
| Glycine max | Gm09 | 6 | CH_gma_690 | 3 | 3 | 0.000177547 |
| Glycine max | Gm20 | 6 | CH_gma_691 | 3 | 3 | 0.000177547 |
| Glycine max | Gm13 | 6 | CH_gma_82 | 7 | 9 | 0.0000000000000268687 |
| Hordeum vulgare | chr6H | 6 | CH_hvu_421 | 6 | 63 | 0.00000519521 |
| Hordeum vulgare | chr6H | 6 | CH_hvu_568 | 3 | 3 | 0.0000684848 |
| Lolium perenne | Lp_chr4_0 | 6 | CH_lpe_111 | 6 | 17 | 0.0000000000670495 |
| Lolium perenne | Lp_chr2_0 | 6 | CH_lpe_237 | 4 | 5 | 0.0000000675868 |
| Lolium perenne | Lp_chr6_0 | 6 | CH_lpe_409 | 4 | 15 | 0.0000183536 |
| Magnolia biondii | Chr18 | 6 | CH_mbi_699 | 4 | 29 | 0.0000313899 |
| Miscanthus sinensis | Chr02 | 6 | CH_msi_1115 | 3 | 4 | 0.000730028 |
| Oryza alta | GWHAZTO00000016 | 6 | CH_oal_1510 | 3 | 4 | 0.00037031 |
| Oryza alta | GWHAZTO00000003 | 6 | CH_oal_496 | 4 | 4 | 0.0000000886803 |
| Oryza alta | GWHAZTO00000001 | 6 | CH_oal_745 | 4 | 7 | 0.00000309667 |
| Oryza sativa ssp. indica | Chr3 | 6 | CH_osaindica_728 | 3 | 5 | 0.00085157 |
| Oryza sativa Kitaake | Chr3 | 6 | CH_osak_469 | 4 | 7 | 0.00000505246 |
| Oropetium thomaeum | Chromosome_4 | 6 | CH_oth_226 | 3 | 3 | 0.0000694667 |
| Phyllostachys edulis | hic_scaffold_3 | 6 | CH_ped_366 | 4 | 4 | 0.000000646104 |
| Phyllostachys edulis | hic_scaffold_21 | 6 | CH_ped_367 | 4 | 4 | 0.000000646104 |
| Phyllostachys edulis | hic_scaffold_10 | 6 | CH_ped_494 | 4 | 6 | 0.00000966244 |
| Panicum hallii | Chr09 | 6 | CH_pha_261 | 4 | 4 | 0.000000159389 |
| Panicum hallii | Chr08 | 6 | CH_pha_520 | 3 | 3 | 0.000111946 |
| Populus trichocarpa | Chr14 | 6 | CH_ptr_176 | 5 | 5 | 0.0000000000482049 |
| Populus trichocarpa | Chr02 | 6 | CH_ptr_297 | 4 | 4 | 0.0000000476526 |
| Populus trichocarpa | Chr05 | 6 | CH_ptr_521 | 3 | 3 | 0.0000457994 |
| Populus trichocarpa | Chr08 | 6 | CH_ptr_522 | 3 | 3 | 0.0000457994 |
| Populus trichocarpa | Chr10 | 6 | CH_ptr_639 | 3 | 4 | 0.000183049 |
| Sorghum bicolor | Chr06 | 6 | CH_sbi_202 | 5 | 6 | 0.00000000222972 |
| Sorghum bicolor | Chr01 | 6 | CH_sbi_728 | 3 | 4 | 0.000603553 |
| Secale cereale | GWHASIY00000002 | 6 | CH_sce_197 | 6 | 9 | 0.0000000000441681 |
| Secale cereale | GWHASIY00000002 | 6 | CH_sce_245 | 5 | 5 | 0.000000000362229 |
| Sequoiadendron giganteum | chr4 | 6 | CH_sgi_1901 | 3 | 3 | 0.0000655864 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_1902 | 3 | 3 | 0.0000655864 |
| Sequoiadendron giganteum | chr4 | 6 | CH_sgi_2516 | 3 | 5 | 0.00065473 |
| Sequoiadendron giganteum | chr4 | 6 | CH_sgi_84 | 12 | 15 | 3.59599e-29 |
| Sequoiadendron giganteum | chr9 | 6 | CH_sgi_956 | 5 | 10 | 0.0000000202075 |
| Setaria italica | scaffold_9 | 6 | CH_sit_368 | 4 | 4 | 0.000000349477 |
| Setaria italica | scaffold_8 | 6 | CH_sit_710 | 3 | 3 | 0.000200687 |
| Setaria italica | scaffold_1 | 6 | CH_sit_711 | 3 | 3 | 0.000200687 |
| Solanum lycopersicum | SL4.0ch01 | 6 | CH_sly_221 | 5 | 8 | 0.00000000478517 |
| Solanum lycopersicum | SL4.0ch09 | 6 | CH_sly_635 | 3 | 3 | 0.0000637738 |
| Solanum lycopersicum | SL4.0ch09 | 6 | CH_sly_636 | 3 | 3 | 0.0000637738 |
| Solanum lycopersicum | SL4.0ch03 | 6 | CH_sly_637 | 3 | 3 | 0.0000637738 |
| Setaria viridis | Chr_09 | 6 | CH_svi_351 | 4 | 4 | 0.000000222422 |
| Setaria viridis | Chr_08 | 6 | CH_svi_833 | 3 | 4 | 0.000587249 |
| Triticum aestivum | Chr6D | 6 | CH_tae_1514 | 4 | 5 | 0.00000361777 |
| Triticum aestivum | Chr4A | 6 | CH_tae_1515 | 4 | 5 | 0.00000361777 |
| Triticum aestivum | Chr4D | 6 | CH_tae_1516 | 4 | 5 | 0.00000361777 |
| Triticum aestivum | Chr2D | 6 | CH_tae_1670 | 4 | 6 | 0.0000108394 |
| Triticum aestivum | Chr2B | 6 | CH_tae_2417 | 3 | 3 | 0.000452959 |
| Triticum aestivum | Chr1B | 6 | CH_tae_2418 | 3 | 3 | 0.000452959 |
| Triticum aestivum | Chr4B | 6 | CH_tae_733 | 5 | 5 | 0.00000000115201 |
| Triticum dicoccoides | 6A | 6 | CH_tdi_1014 | 3 | 3 | 0.000201044 |
| Triticum dicoccoides | 6B | 6 | CH_tdi_1015 | 3 | 3 | 0.000201044 |
| Triticum dicoccoides | 4A | 6 | CH_tdi_452 | 4 | 4 | 0.000000283488 |
| Triticum dicoccoides | 4B | 6 | CH_tdi_453 | 4 | 4 | 0.000000283488 |
| Triticum turgidum | chr2A | 6 | CH_ttu_1141 | 3 | 3 | 0.0001964 |
| Triticum turgidum | chr1A | 6 | CH_ttu_1142 | 3 | 3 | 0.0001964 |
| Triticum turgidum | chr6A | 6 | CH_ttu_1143 | 3 | 3 | 0.0001964 |
| Triticum turgidum | chr6B | 6 | CH_ttu_1144 | 3 | 3 | 0.0001964 |
| Triticum turgidum | chr4A | 6 | CH_ttu_1145 | 3 | 3 | 0.0001964 |
| Triticum turgidum | chr4B | 6 | CH_ttu_538 | 4 | 4 | 0.000000279295 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00003.1 | 6 | CH_zjn_122 | 4 | 4 | 0.000000194895 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00002.1 | 6 | CH_zjn_151 | 4 | 5 | 0.00000097342 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00051.1 | 6 | CH_zjn_152 | 4 | 5 | 0.00000097342 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00004.1 | 6 | CH_zjn_224 | 4 | 8 | 0.0000135836 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |