Functional clusters
Information
- Type InterPro
- Description Aldo-keto reductase family 4C
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00012 | 5 | CH_atr_620 | 2 | 5 | 0.000794313 |
| Brachypodium distachyon | Bd2 | 5 | CH_bdi_583 | 2 | 2 | 0.000616675 |
| Cenchrus purpureus | GWHAORA00000001 | 5 | CH_cpu_342 | 4 | 4 | 0.0000000000887224 |
| Cenchrus purpureus | GWHAORA00000009 | 5 | CH_cpu_763 | 3 | 3 | 0.0000005218 |
| Cenchrus purpureus | GWHAORA00000007 | 5 | CH_cpu_896 | 4 | 30 | 0.00000242266 |
| Dioscorea dumetorum | contig199 | 5 | CH_ddu_394 | 2 | 2 | 0.000414536 |
| Digitaria exilis | Dexi_CM05836_chr05A | 5 | CH_dex_1589 | 2 | 2 | 0.000935766 |
| Eragrostis curvula | 7 | 5 | CH_ecu_610 | 3 | 3 | 0.0000000451 |
| Glycine max | Gm03 | 5 | CH_gma_175 | 4 | 6 | 0.000000000172225 |
| Lolium perenne | Lp_chr3_0 | 5 | CH_lpe_257 | 3 | 3 | 0.000000130177 |
| Oryza brachyantha | 1 | 5 | CH_obr_176 | 3 | 3 | 0.0000000535231 |
| Oryza sativa ssp. indica | Chr1 | 5 | CH_osaindica_215 | 3 | 3 | 0.0000000160135 |
| Oryza sativa Kitaake | Chr1 | 5 | CH_osak_311 | 3 | 3 | 0.0000000475225 |
| Panicum hallii | Chr05 | 5 | CH_pha_148 | 4 | 5 | 0.000000000206037 |
| Populus trichocarpa | Chr16 | 5 | CH_ptr_332 | 3 | 4 | 0.000000200443 |
| Sorghum bicolor | Chr03 | 5 | CH_sbi_286 | 3 | 3 | 0.000000103262 |
| Secale cereale | GWHASIY00000001 | 5 | CH_sce_172 | 5 | 12 | 0.00000000000642751 |
| Sequoiadendron giganteum | chr9 | 5 | CH_sgi_2617 | 2 | 4 | 0.000876801 |
| Setaria italica | scaffold_5 | 5 | CH_sit_344 | 3 | 3 | 0.000000176879 |
| Triticum aestivum | Chr1D | 5 | CH_tae_290 | 6 | 7 | 3.26907e-16 |
| Triticum aestivum | Chr1B | 5 | CH_tae_793 | 4 | 5 | 0.00000000353032 |
| Zea mays B73 | 3 | 5 | CH_zma_481 | 2 | 2 | 0.000511313 |
| Zea mays B73 | 6 | 5 | CH_zma_482 | 2 | 2 | 0.000511313 |
| Zostera marina | Chr02 | 5 | CH_zosmarina_43 | 3 | 3 | 0.0000000139858 |
| Amborella trichopoda | AmTr_v1.0_scaffold00012 | 6 | CH_atr_620 | 2 | 5 | 0.000794313 |
| Brachypodium distachyon | Bd2 | 6 | CH_bdi_583 | 2 | 2 | 0.000616675 |
| Cenchrus purpureus | GWHAORA00000001 | 6 | CH_cpu_342 | 4 | 4 | 0.0000000000887224 |
| Cenchrus purpureus | GWHAORA00000009 | 6 | CH_cpu_763 | 3 | 3 | 0.0000005218 |
| Cenchrus purpureus | GWHAORA00000007 | 6 | CH_cpu_896 | 4 | 30 | 0.00000242266 |
| Dioscorea dumetorum | contig199 | 6 | CH_ddu_394 | 2 | 2 | 0.000414536 |
| Digitaria exilis | Dexi_CM05836_chr05A | 6 | CH_dex_1589 | 2 | 2 | 0.000935766 |
| Eragrostis curvula | 7 | 6 | CH_ecu_610 | 3 | 3 | 0.0000000451 |
| Glycine max | Gm03 | 6 | CH_gma_175 | 4 | 6 | 0.000000000172225 |
| Lolium perenne | Lp_chr3_0 | 6 | CH_lpe_257 | 3 | 3 | 0.000000130177 |
| Oryza brachyantha | 1 | 6 | CH_obr_176 | 3 | 3 | 0.0000000535231 |
| Oryza sativa ssp. indica | Chr1 | 6 | CH_osaindica_215 | 3 | 3 | 0.0000000160135 |
| Oryza sativa Kitaake | Chr1 | 6 | CH_osak_311 | 3 | 3 | 0.0000000475225 |
| Panicum hallii | Chr05 | 6 | CH_pha_148 | 4 | 5 | 0.000000000206037 |
| Populus trichocarpa | Chr16 | 6 | CH_ptr_332 | 3 | 4 | 0.000000200443 |
| Sorghum bicolor | Chr03 | 6 | CH_sbi_286 | 3 | 3 | 0.000000103262 |
| Secale cereale | GWHASIY00000001 | 6 | CH_sce_172 | 5 | 12 | 0.00000000000642751 |
| Sequoiadendron giganteum | chr9 | 6 | CH_sgi_2617 | 2 | 4 | 0.000876801 |
| Setaria italica | scaffold_5 | 6 | CH_sit_344 | 3 | 3 | 0.000000176879 |
| Triticum aestivum | Chr1D | 6 | CH_tae_290 | 6 | 7 | 3.26907e-16 |
| Triticum aestivum | Chr1B | 6 | CH_tae_793 | 4 | 5 | 0.00000000353032 |
| Zea mays B73 | 3 | 6 | CH_zma_481 | 2 | 2 | 0.000511313 |
| Zea mays B73 | 6 | 6 | CH_zma_482 | 2 | 2 | 0.000511313 |
| Zostera marina | Chr02 | 6 | CH_zosmarina_43 | 3 | 3 | 0.0000000139858 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |