Functional clusters
Information
- Type InterPro
- Description Ricin B-like lectins
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Asparagus officinalis | AsparagusV1_09 | 5 | CH_aof_148 | 4 | 42 | 0.0000710432 |
| Ceratophyllum demersum | 7 | 5 | CH_cde_440 | 2 | 2 | 0.000473878 |
| Cenchrus purpureus | GWHAORA00000003 | 5 | CH_cpu_954 | 4 | 15 | 0.00000493038 |
| Cenchrus purpureus | GWHAORA00000010 | 5 | CH_cpu_998 | 3 | 3 | 0.00000782127 |
| Digitaria exilis | Dexi_CM05836_chr04A | 5 | CH_dex_335 | 5 | 11 | 0.000000000732856 |
| Glycine max | Gm05 | 5 | CH_gma_670 | 3 | 11 | 0.000129607 |
| Lolium perenne | Lp_chr2_0 | 5 | CH_lpe_334 | 3 | 6 | 0.0000017353 |
| Oryza brachyantha | 7 | 5 | CH_obr_192 | 3 | 3 | 0.000000187331 |
| Oryza sativa ssp. indica | Chr4 | 5 | CH_osaindica_300 | 3 | 3 | 0.000000480405 |
| Populus trichocarpa | Chr10 | 5 | CH_ptr_636 | 3 | 12 | 0.000181584 |
| Setaria italica | scaffold_2 | 5 | CH_sit_415 | 3 | 3 | 0.00000144536 |
| Selaginella moellendorffii | scaffold_0 | 5 | CH_smo_146 | 3 | 3 | 0.0000047603 |
| Saccharum spontaneum | Chr5C | 5 | CH_ssp_523 | 4 | 8 | 0.000000167799 |
| Setaria viridis | Chr_02 | 5 | CH_svi_435 | 3 | 3 | 0.00000185822 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00001.1 | 5 | CH_zjn_168 | 3 | 4 | 0.00000180639 |
| Zea mays B104 | scaffold7.2687 | 5 | CH_zma-b104_26 | 3 | 4 | 0.000000557364 |
| Asparagus officinalis | AsparagusV1_09 | 6 | CH_aof_148 | 4 | 42 | 0.0000710432 |
| Ceratophyllum demersum | 7 | 6 | CH_cde_440 | 2 | 2 | 0.000473878 |
| Cenchrus purpureus | GWHAORA00000003 | 6 | CH_cpu_954 | 4 | 15 | 0.00000493038 |
| Cenchrus purpureus | GWHAORA00000010 | 6 | CH_cpu_998 | 3 | 3 | 0.00000782127 |
| Digitaria exilis | Dexi_CM05836_chr04A | 6 | CH_dex_335 | 5 | 11 | 0.000000000732856 |
| Glycine max | Gm05 | 6 | CH_gma_670 | 3 | 11 | 0.000129607 |
| Lolium perenne | Lp_chr2_0 | 6 | CH_lpe_334 | 3 | 6 | 0.0000017353 |
| Oryza brachyantha | 7 | 6 | CH_obr_192 | 3 | 3 | 0.000000187331 |
| Oryza sativa ssp. indica | Chr4 | 6 | CH_osaindica_300 | 3 | 3 | 0.000000480405 |
| Populus trichocarpa | Chr10 | 6 | CH_ptr_636 | 3 | 12 | 0.000181584 |
| Setaria italica | scaffold_2 | 6 | CH_sit_415 | 3 | 3 | 0.00000144536 |
| Selaginella moellendorffii | scaffold_0 | 6 | CH_smo_146 | 3 | 3 | 0.0000047603 |
| Saccharum spontaneum | Chr5C | 6 | CH_ssp_523 | 4 | 8 | 0.000000167799 |
| Setaria viridis | Chr_02 | 6 | CH_svi_435 | 3 | 3 | 0.00000185822 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00001.1 | 6 | CH_zjn_168 | 3 | 4 | 0.00000180639 |
| Zea mays B104 | scaffold7.2687 | 6 | CH_zma-b104_26 | 3 | 4 | 0.000000557364 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |