Functional clusters

Information

  • Type InterPro
  • Description Ascorbate oxidase, third cupredoxin domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aegilops tauschii 5D 5 CH_ata_520 2 2 0.000147725
Arabidopsis thaliana Chr5 5 CH_ath_577 2 7 0.000515661
Brachypodium distachyon Bd1 5 CH_bdi_520 2 3 0.000370005
Cenchrus purpureus GWHAORA00000012 5 CH_cpu_798 3 3 0.00000080277
Digitaria exilis Dexi_CM05836_chr04A 5 CH_dex_1586 2 2 0.000935766
Elaeis guineensis EG5.1_Chr15 5 CH_egu_114 3 3 0.000000134621
Hordeum vulgare chr7H 5 CH_hvu_755 2 2 0.000608754
Lolium perenne Lp_chr5_0 5 CH_lpe_419 3 17 0.0000210609
Oryza sativa ssp. indica Chr6 5 CH_osaindica_548 2 2 0.000154983
Oryza sativa ssp. japonica chr06 5 CH_osa_773 2 4 0.000950537
Phyllostachys edulis hic_scaffold_8 5 CH_ped_799 2 2 0.000407456
Panicum hallii Chr04 5 CH_pha_635 2 2 0.000348665
Sorghum bicolor Chr10 5 CH_sbi_747 2 2 0.000880023
Sequoiadendron giganteum chr2 5 CH_sgi_58 11 20 4.93267e-34
Setaria italica scaffold_4 5 CH_sit_795 2 2 0.000580434
Setaria italica scaffold_2 5 CH_sit_796 2 2 0.000580434
Spirodela polyrhiza pseudo15 5 CH_spo_414 2 3 0.000917213
Saccharum spontaneum Chr8D 5 CH_ssp_837 3 4 0.00000330914
Setaria viridis Chr_04 5 CH_svi_797 2 2 0.000521785
Setaria viridis Chr_02 5 CH_svi_798 2 2 0.000521785
Triticum dicoccoides 5A 5 CH_tdi_1185 2 2 0.000623386
Triticum dicoccoides 5B 5 CH_tdi_1186 2 2 0.000623386
Triticum turgidum chr5A 5 CH_ttu_1253 2 2 0.000468801
Triticum turgidum chr5B 5 CH_ttu_1254 2 2 0.000468801
Zoysia japonica ssp. nagirizaki Zjn_sc00008.1 5 CH_zjn_147 3 5 0.000000718447
Zea mays B73 7 5 CH_zma_430 2 2 0.000306788
Zostera marina Chr03 5 CH_zosmarina_319 2 3 0.00086895
Aegilops tauschii 5D 6 CH_ata_520 2 2 0.000147725
Arabidopsis thaliana Chr5 6 CH_ath_577 2 7 0.000515661
Brachypodium distachyon Bd1 6 CH_bdi_520 2 3 0.000370005
Cenchrus purpureus GWHAORA00000012 6 CH_cpu_798 3 3 0.00000080277
Digitaria exilis Dexi_CM05836_chr04A 6 CH_dex_1586 2 2 0.000935766
Elaeis guineensis EG5.1_Chr15 6 CH_egu_114 3 3 0.000000134621
Hordeum vulgare chr7H 6 CH_hvu_755 2 2 0.000608754
Lolium perenne Lp_chr5_0 6 CH_lpe_419 3 17 0.0000210609
Oryza sativa ssp. indica Chr6 6 CH_osaindica_548 2 2 0.000154983
Oryza sativa ssp. japonica chr06 6 CH_osa_773 2 4 0.000950537
Phyllostachys edulis hic_scaffold_8 6 CH_ped_799 2 2 0.000407456
Panicum hallii Chr04 6 CH_pha_635 2 2 0.000348665
Sorghum bicolor Chr10 6 CH_sbi_747 2 2 0.000880023
Sequoiadendron giganteum chr2 6 CH_sgi_58 11 20 4.93267e-34
Setaria italica scaffold_4 6 CH_sit_795 2 2 0.000580434
Setaria italica scaffold_2 6 CH_sit_796 2 2 0.000580434
Spirodela polyrhiza pseudo15 6 CH_spo_414 2 3 0.000917213
Saccharum spontaneum Chr8D 6 CH_ssp_837 3 4 0.00000330914
Setaria viridis Chr_04 6 CH_svi_797 2 2 0.000521785
Setaria viridis Chr_02 6 CH_svi_798 2 2 0.000521785
Triticum dicoccoides 5A 6 CH_tdi_1185 2 2 0.000623386
Triticum dicoccoides 5B 6 CH_tdi_1186 2 2 0.000623386
Triticum turgidum chr5A 6 CH_ttu_1253 2 2 0.000468801
Triticum turgidum chr5B 6 CH_ttu_1254 2 2 0.000468801
Zoysia japonica ssp. nagirizaki Zjn_sc00008.1 6 CH_zjn_147 3 5 0.000000718447
Zea mays B73 7 6 CH_zma_430 2 2 0.000306788
Zostera marina Chr03 6 CH_zosmarina_319 2 3 0.00086895

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001