Functional clusters
Information
- Type InterPro
- Description Xylanase inhibitor I-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_521 | 2 | 2 | 0.000286492 |
| Arabidopsis thaliana | Chr5 | 5 | CH_ath_522 | 2 | 2 | 0.000286492 |
| Amborella trichopoda | AmTr_v1.0_scaffold00025 | 5 | CH_atr_405 | 2 | 2 | 0.0000794407 |
| Cenchrus purpureus | GWHAORA00000007 | 5 | CH_cpu_210 | 5 | 8 | 0.0000000000000966488 |
| Dioscorea dumetorum | contig106 | 5 | CH_ddu_476 | 2 | 2 | 0.000690894 |
| Digitaria exilis | Dexi_CM05836_chr05B | 5 | CH_dex_234 | 4 | 5 | 0.00000000000279961 |
| Eragrostis curvula | Contig8 | 5 | CH_ecu_686 | 3 | 3 | 0.00000018942 |
| Hordeum vulgare | chr3H | 5 | CH_hvu_66 | 6 | 10 | 1.09221e-16 |
| Lolium perenne | Lp_chr3_0 | 5 | CH_lpe_15 | 9 | 19 | 8.20515e-27 |
| Oryza alta | GWHAZTO00000001 | 5 | CH_oal_80 | 7 | 20 | 7.94097e-18 |
| Oryza sativa ssp. indica | Chr5 | 5 | CH_osaindica_315 | 3 | 5 | 0.000000800541 |
| Oryza sativa Kitaake | Chr5 | 5 | CH_osak_201 | 4 | 4 | 0.000000000264824 |
| Oryza sativa Kitaake | Chr1 | 5 | CH_osak_39 | 8 | 14 | 8.37877e-22 |
| Oryza sativa ssp. japonica | chr01 | 5 | CH_osa_41 | 7 | 15 | 7.03507e-19 |
| Phyllostachys edulis | hic_scaffold_14 | 5 | CH_ped_750 | 2 | 2 | 0.000244474 |
| Panicum hallii | Chr05 | 5 | CH_pha_77 | 5 | 5 | 0.0000000000000107779 |
| Populus trichocarpa | Chr19 | 5 | CH_ptr_127 | 5 | 6 | 0.000000000000397779 |
| Sorghum bicolor | Chr03 | 5 | CH_sbi_250 | 3 | 3 | 0.0000000206524 |
| Setaria italica | scaffold_5 | 5 | CH_sit_57 | 6 | 6 | 4.15173e-19 |
| Saccharum spontaneum | Chr3C | 5 | CH_ssp_2150 | 2 | 2 | 0.000858922 |
| Saccharum spontaneum | Chr3B | 5 | CH_ssp_737 | 3 | 6 | 0.00000143424 |
| Setaria viridis | Chr_05 | 5 | CH_svi_54 | 6 | 6 | 2.4373e-19 |
| Triticum aestivum | Chr3B | 5 | CH_tae_119 | 8 | 9 | 5.34853e-23 |
| Triticum aestivum | Chr3A | 5 | CH_tae_185 | 7 | 8 | 1.81523e-19 |
| Triticum turgidum | chr3B | 5 | CH_ttu_121 | 6 | 9 | 4.51176e-16 |
| Triticum turgidum | chr3A | 5 | CH_ttu_152 | 5 | 5 | 0.000000000000031259 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_521 | 2 | 2 | 0.000286492 |
| Arabidopsis thaliana | Chr5 | 6 | CH_ath_522 | 2 | 2 | 0.000286492 |
| Amborella trichopoda | AmTr_v1.0_scaffold00025 | 6 | CH_atr_405 | 2 | 2 | 0.0000794407 |
| Cenchrus purpureus | GWHAORA00000007 | 6 | CH_cpu_210 | 5 | 8 | 0.0000000000000966488 |
| Dioscorea dumetorum | contig106 | 6 | CH_ddu_476 | 2 | 2 | 0.000690894 |
| Digitaria exilis | Dexi_CM05836_chr05B | 6 | CH_dex_234 | 4 | 5 | 0.00000000000279961 |
| Eragrostis curvula | Contig8 | 6 | CH_ecu_686 | 3 | 3 | 0.00000018942 |
| Hordeum vulgare | chr3H | 6 | CH_hvu_66 | 6 | 10 | 1.09221e-16 |
| Lolium perenne | Lp_chr3_0 | 6 | CH_lpe_15 | 9 | 19 | 8.20515e-27 |
| Oryza alta | GWHAZTO00000001 | 6 | CH_oal_80 | 7 | 20 | 7.94097e-18 |
| Oryza sativa ssp. indica | Chr5 | 6 | CH_osaindica_315 | 3 | 5 | 0.000000800541 |
| Oryza sativa Kitaake | Chr5 | 6 | CH_osak_201 | 4 | 4 | 0.000000000264824 |
| Oryza sativa Kitaake | Chr1 | 6 | CH_osak_39 | 8 | 14 | 8.37877e-22 |
| Oryza sativa ssp. japonica | chr01 | 6 | CH_osa_41 | 7 | 15 | 7.03507e-19 |
| Phyllostachys edulis | hic_scaffold_14 | 6 | CH_ped_750 | 2 | 2 | 0.000244474 |
| Panicum hallii | Chr05 | 6 | CH_pha_77 | 5 | 5 | 0.0000000000000107779 |
| Populus trichocarpa | Chr19 | 6 | CH_ptr_127 | 5 | 6 | 0.000000000000397779 |
| Sorghum bicolor | Chr03 | 6 | CH_sbi_250 | 3 | 3 | 0.0000000206524 |
| Setaria italica | scaffold_5 | 6 | CH_sit_57 | 6 | 6 | 4.15173e-19 |
| Saccharum spontaneum | Chr3C | 6 | CH_ssp_2150 | 2 | 2 | 0.000858922 |
| Saccharum spontaneum | Chr3B | 6 | CH_ssp_737 | 3 | 6 | 0.00000143424 |
| Setaria viridis | Chr_05 | 6 | CH_svi_54 | 6 | 6 | 2.4373e-19 |
| Triticum aestivum | Chr3B | 6 | CH_tae_119 | 8 | 9 | 5.34853e-23 |
| Triticum aestivum | Chr3A | 6 | CH_tae_185 | 7 | 8 | 1.81523e-19 |
| Triticum turgidum | chr3B | 6 | CH_ttu_121 | 6 | 9 | 4.51176e-16 |
| Triticum turgidum | chr3A | 6 | CH_ttu_152 | 5 | 5 | 0.000000000000031259 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |