Functional clusters

Information

  • Type InterPro
  • Description Hydrophobic seed protein domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Ananas comosus LG03 5 CH_aco_86 3 3 0.00000170289
Allium sativum chr6 5 CH_asa_147 6 13 0.0000000000012683
Allium sativum chr5 5 CH_asa_752 3 4 0.0000295096
Allium sativum chr4 5 CH_asa_931 3 5 0.0000737458
Aegilops tauschii 4D 5 CH_ata_16 9 9 1.34074e-23
Aegilops tauschii 1D 5 CH_ata_235 4 5 0.000000163569
Aegilops tauschii 7D 5 CH_ata_236 4 5 0.000000163569
Aegilops tauschii 7D 5 CH_ata_509 3 3 0.000143641
Arabidopsis thaliana Chr4 5 CH_ath_32 9 37 1.48859e-18
Brachypodium distachyon Bd1 5 CH_bdi_177 4 6 0.0000000933633
Brachypodium distachyon Bd3 5 CH_bdi_283 4 14 0.00000620558
Brachypodium distachyon Bd2 5 CH_bdi_307 3 3 0.0000101027
Calamus simplicifolius scaffold1421 5 CH_calsi_23 6 7 0.00000000000000832285
Cenchrus purpureus GWHAORA00000013 5 CH_cpu_1221 3 3 0.0000569264
Cenchrus purpureus GWHAORA00000006 5 CH_cpu_194 6 6 0.0000000000000431691
Cenchrus purpureus GWHAORA00000011 5 CH_cpu_27 13 18 1.03601e-31
Cenchrus purpureus GWHAORA00000005 5 CH_cpu_419 5 7 0.00000000100961
Cenchrus purpureus GWHAORA00000005 5 CH_cpu_597 4 4 0.000000052796
Cenchrus purpureus GWHAORA00000014 5 CH_cpu_795 4 6 0.000000790761
Dioscorea dumetorum contig418 5 CH_ddu_174 3 3 0.000000859232
Digitaria exilis Dexi_CM05836_chr02B 5 CH_dex_265 6 12 0.0000000000313179
Digitaria exilis Dexi_CM05836_chr05B 5 CH_dex_496 4 4 0.0000000442363
Digitaria exilis Dexi_CM05836_chr07A 5 CH_dex_581 4 5 0.000000221021
Digitaria exilis Dexi_CM05836_chr09A 5 CH_dex_582 4 6 0.000000221021
Digitaria exilis Dexi_CM05836_chr09B 5 CH_dex_75 8 8 2.42464e-20
Digitaria exilis Dexi_CM05836_chr07B 5 CH_dex_967 3 3 0.0000490221
Digitaria exilis Dexi_CM05836_chrUA 5 CH_dex_968 3 3 0.0000490221
Eragrostis curvula 1 5 CH_ecu_377 6 25 0.0000000000259157
Eragrostis curvula Contig30 5 CH_ecu_874 3 3 0.0000034727
Elaeis guineensis EG5.1_Chr11 5 CH_egu_183 3 3 0.00000296166
Elaeis guineensis EG5.1_Chr4 5 CH_egu_34 5 5 0.000000000000478534
Glycine max Gm17 5 CH_gma_28 9 10 1.66952e-23
Glycine max Gm05 5 CH_gma_29 9 10 1.66952e-23
Glycine max Gm15 5 CH_gma_47 8 12 1.35834e-18
Hordeum vulgare chr1H 5 CH_hvu_212 5 9 0.00000000147262
Hordeum vulgare chr4H 5 CH_hvu_69 7 9 1.94652e-16
Hordeum vulgare chr7H 5 CH_hvu_8 13 16 1.38012e-34
Lolium perenne Lp_chr2_0 5 CH_lpe_204 4 6 0.000000015871
Lolium perenne Lp_chr1_0 5 CH_lpe_434 3 5 0.0000313497
Lolium perenne Lp_chr4_0 5 CH_lpe_86 6 17 0.00000000000192298
Musa acuminata chr04 5 CH_mac_93 4 4 0.00000000487314
Magnolia biondii Chr18 5 CH_mbi_808 3 16 0.0000692589
Miscanthus sinensis Chr12 5 CH_msi_33 8 8 3.42149e-22
Miscanthus sinensis Chr02 5 CH_msi_518 4 12 0.00000291027
Oryza alta GWHAZTO00000016 5 CH_oal_1152 3 4 0.0000833397
Oryza alta GWHAZTO00000010 5 CH_oal_168 6 10 0.000000000000784623
Oryza alta GWHAZTO00000001 5 CH_oal_1748 3 7 0.000728258
Oryza alta GWHAZTO00000022 5 CH_oal_21 12 16 1.32372e-31
Oryza alta GWHAZTO00000022 5 CH_oal_538 4 6 0.000000179404
Oryza alta GWHAZTO00000003 5 CH_oal_905 3 3 0.0000208441
Oryza brachyantha 10 5 CH_obr_34 7 10 2.06139e-16
Oryza sativa ssp. indica Chr10 5 CH_osaindica_219 4 4 0.0000000169269
Oryza sativa ssp. indica Chr3 5 CH_osaindica_279 4 6 0.000000253586
Oryza sativa ssp. indica Chr3 5 CH_osaindica_512 3 4 0.0000873166
Oryza sativa ssp. indica Chr10 5 CH_osaindica_52 8 12 2.12208e-18
Oryza sativa Kitaake Chr10 5 CH_osak_170 5 5 0.0000000000377903
Oryza sativa Kitaake Chr3 5 CH_osak_304 4 4 0.0000000394909
Oryza sativa Kitaake Chr10 5 CH_osak_41 9 11 1.27929e-21
Oryza sativa Kitaake Chr3 5 CH_osak_560 3 3 0.00004009
Oryza sativa ssp. japonica chr03 5 CH_osa_425 3 3 0.0000207517
Oryza sativa ssp. japonica chr03 5 CH_osa_426 3 3 0.0000207517
Oryza sativa ssp. japonica chr04 5 CH_osa_427 3 3 0.0000207517
Oryza sativa ssp. japonica chr10 5 CH_osa_531 3 4 0.000082957
Oryza sativa ssp. japonica chr10 5 CH_osa_63 7 9 2.06873e-16
Oropetium thomaeum Chromosome_4 5 CH_oth_163 3 4 0.00000620252
Oropetium thomaeum Chromosome_1 5 CH_oth_164 3 3 0.00000620252
Phyllostachys edulis hic_scaffold_15 5 CH_ped_480 3 3 0.00000728431
Phyllostachys edulis hic_scaffold_15 5 CH_ped_543 3 4 0.000029126
Phyllostachys edulis hic_scaffold_13 5 CH_ped_624 3 5 0.0000727867
Panicum hallii Chr09 5 CH_pha_14 10 13 2.00659e-24
Panicum hallii Chr02 5 CH_pha_227 4 4 0.0000000273038
Panicum hallii Chr07 5 CH_pha_79 6 6 0.0000000000000200579
Populus trichocarpa Chr01 5 CH_ptr_430 3 3 0.00000340777
Sorghum bicolor Chr04 5 CH_sbi_17 12 18 3.3225e-28
Sorghum bicolor Chr06 5 CH_sbi_315 4 5 0.000000223421
Sorghum bicolor Chr01 5 CH_sbi_500 3 3 0.0000435559
Sorghum bicolor Chr08 5 CH_sbi_67 7 7 4.05441e-17
Secale cereale GWHASIY00000005 5 CH_sce_21 12 23 2.12947e-26
Secale cereale GWHASIY00000001 5 CH_sce_234 5 6 0.000000000264873
Secale cereale GWHASIY00000005 5 CH_sce_834 3 3 0.0000472009
Sequoiadendron giganteum chr5 5 CH_sgi_625 6 80 0.00000000005169
Setaria italica scaffold_7 5 CH_sit_164 5 6 0.000000000033586
Setaria italica scaffold_9 5 CH_sit_23 9 9 5.71063e-25
Solanum lycopersicum SL4.0ch03 5 CH_sly_2 16 19 1.25911e-43
Solanum lycopersicum SL4.0ch08 5 CH_sly_84 7 9 3.89781e-16
Saccharum spontaneum Chr5B 5 CH_ssp_1048 3 3 0.0000167361
Saccharum spontaneum Chr5B 5 CH_ssp_1049 3 3 0.0000167361
Saccharum spontaneum Chr5D 5 CH_ssp_1050 3 3 0.0000167361
Saccharum spontaneum Chr4B 5 CH_ssp_1051 3 3 0.0000167361
Saccharum spontaneum Chr1A 5 CH_ssp_1927 3 7 0.000584752
Saccharum spontaneum Chr1D 5 CH_ssp_284 5 9 0.000000000647667
Saccharum spontaneum Chr5C 5 CH_ssp_376 4 4 0.00000000938392
Saccharum spontaneum Chr1D 5 CH_ssp_870 4 12 0.00000462831
Setaria viridis Chr_07 5 CH_svi_175 5 7 0.000000000114636
Setaria viridis Chr_09 5 CH_svi_26 9 9 5.38335e-25
Triticum aestivum Chr1D 5 CH_tae_1478 4 5 0.00000271156
Triticum aestivum ChrUnknown 5 CH_tae_2046 6 66 0.0000992684
Triticum aestivum Chr4D 5 CH_tae_2363 3 3 0.000365087
Triticum aestivum Chr1B 5 CH_tae_2594 4 15 0.000731483
Triticum aestivum Chr5A 5 CH_tae_349 7 8 0.0000000000000137381
Triticum aestivum Chr4B 5 CH_tae_4 26 37 5.34373e-61
Triticum aestivum Chr7A 5 CH_tae_500 6 7 0.00000000000823821
Triticum aestivum Chr7D 5 CH_tae_501 6 7 0.00000000000823821
Triticum aestivum Chr7A 5 CH_tae_551 6 8 0.0000000000329113
Triticum aestivum Chr4B 5 CH_tae_705 5 5 0.000000000802419
Triticum aestivum Chr1A 5 CH_tae_706 5 5 0.000000000802419
Triticum aestivum Chr7B 5 CH_tae_80 11 12 8.75746e-26
Triticum dicoccoides 5B 5 CH_tdi_1079 3 4 0.000301962
Triticum dicoccoides 2B 5 CH_tdi_1080 3 4 0.000301962
Triticum dicoccoides 7B 5 CH_tdi_139 6 6 0.000000000000074291
Triticum dicoccoides 5A 5 CH_tdi_157 6 7 0.000000000000519599
Triticum dicoccoides 7A 5 CH_tdi_221 5 5 0.0000000000758331
Triticum dicoccoides 1A 5 CH_tdi_256 5 6 0.00000000045462
Triticum dicoccoides 4B 5 CH_tdi_32 9 9 6.36808e-23
Triticum dicoccoides 1B 5 CH_tdi_446 5 15 0.000000225841
Triticum dicoccoides 2A 5 CH_tdi_874 3 3 0.0000755487
Triticum turgidum chr2A 5 CH_ttu_1358 3 5 0.000733152
Triticum turgidum chr5A 5 CH_ttu_136 7 9 0.00000000000000255755
Triticum turgidum chr1A 5 CH_ttu_264 5 5 0.0000000000745988
Triticum turgidum chr7B 5 CH_ttu_265 5 5 0.0000000000745988
Triticum turgidum chr1B 5 CH_ttu_473 4 4 0.0000000745871
Triticum turgidum chr4B 5 CH_ttu_9 14 15 5.34182e-37
Zoysia japonica ssp. nagirizaki Zjn_sc00053.1 5 CH_zjn_317 4 27 0.0000464036
Zea mays B73 9 5 CH_zma_25 7 7 3.70188e-18
Zea mays B73 10 5 CH_zma_286 3 3 0.0000176281
Zea mays B73 1 5 CH_zma_287 3 3 0.0000176281
Ananas comosus LG03 6 CH_aco_86 3 3 0.00000170289
Allium sativum chr6 6 CH_asa_147 6 13 0.0000000000012683
Allium sativum chr5 6 CH_asa_752 3 4 0.0000295096
Allium sativum chr4 6 CH_asa_931 3 5 0.0000737458
Aegilops tauschii 4D 6 CH_ata_16 9 9 1.34074e-23
Aegilops tauschii 1D 6 CH_ata_235 4 5 0.000000163569
Aegilops tauschii 7D 6 CH_ata_236 4 5 0.000000163569
Aegilops tauschii 7D 6 CH_ata_509 3 3 0.000143641
Arabidopsis thaliana Chr4 6 CH_ath_32 9 37 1.48859e-18
Brachypodium distachyon Bd1 6 CH_bdi_177 4 6 0.0000000933633
Brachypodium distachyon Bd3 6 CH_bdi_283 4 14 0.00000620558
Brachypodium distachyon Bd2 6 CH_bdi_307 3 3 0.0000101027
Calamus simplicifolius scaffold1421 6 CH_calsi_23 6 7 0.00000000000000832285
Cenchrus purpureus GWHAORA00000013 6 CH_cpu_1221 3 3 0.0000569264
Cenchrus purpureus GWHAORA00000006 6 CH_cpu_194 6 6 0.0000000000000431691
Cenchrus purpureus GWHAORA00000011 6 CH_cpu_27 13 18 1.03601e-31
Cenchrus purpureus GWHAORA00000005 6 CH_cpu_419 5 7 0.00000000100961
Cenchrus purpureus GWHAORA00000005 6 CH_cpu_597 4 4 0.000000052796
Cenchrus purpureus GWHAORA00000014 6 CH_cpu_795 4 6 0.000000790761
Dioscorea dumetorum contig418 6 CH_ddu_174 3 3 0.000000859232
Digitaria exilis Dexi_CM05836_chr02B 6 CH_dex_265 6 12 0.0000000000313179
Digitaria exilis Dexi_CM05836_chr05B 6 CH_dex_496 4 4 0.0000000442363
Digitaria exilis Dexi_CM05836_chr07A 6 CH_dex_581 4 5 0.000000221021
Digitaria exilis Dexi_CM05836_chr09A 6 CH_dex_582 4 6 0.000000221021
Digitaria exilis Dexi_CM05836_chr09B 6 CH_dex_75 8 8 2.42464e-20
Digitaria exilis Dexi_CM05836_chr07B 6 CH_dex_967 3 3 0.0000490221
Digitaria exilis Dexi_CM05836_chrUA 6 CH_dex_968 3 3 0.0000490221
Eragrostis curvula 1 6 CH_ecu_377 6 25 0.0000000000259157
Eragrostis curvula Contig30 6 CH_ecu_874 3 3 0.0000034727
Elaeis guineensis EG5.1_Chr11 6 CH_egu_183 3 3 0.00000296166
Elaeis guineensis EG5.1_Chr4 6 CH_egu_34 5 5 0.000000000000478534
Glycine max Gm17 6 CH_gma_28 9 10 1.66952e-23
Glycine max Gm05 6 CH_gma_29 9 10 1.66952e-23
Glycine max Gm15 6 CH_gma_47 8 12 1.35834e-18
Hordeum vulgare chr1H 6 CH_hvu_212 5 9 0.00000000147262
Hordeum vulgare chr4H 6 CH_hvu_69 7 9 1.94652e-16
Hordeum vulgare chr7H 6 CH_hvu_8 13 16 1.38012e-34
Lolium perenne Lp_chr2_0 6 CH_lpe_204 4 6 0.000000015871
Lolium perenne Lp_chr1_0 6 CH_lpe_434 3 5 0.0000313497
Lolium perenne Lp_chr4_0 6 CH_lpe_86 6 17 0.00000000000192298
Musa acuminata chr04 6 CH_mac_93 4 4 0.00000000487314
Magnolia biondii Chr18 6 CH_mbi_808 3 16 0.0000692589
Miscanthus sinensis Chr12 6 CH_msi_33 8 8 3.42149e-22
Miscanthus sinensis Chr02 6 CH_msi_518 4 12 0.00000291027
Oryza alta GWHAZTO00000016 6 CH_oal_1152 3 4 0.0000833397
Oryza alta GWHAZTO00000010 6 CH_oal_168 6 10 0.000000000000784623
Oryza alta GWHAZTO00000001 6 CH_oal_1748 3 7 0.000728258
Oryza alta GWHAZTO00000022 6 CH_oal_21 12 16 1.32372e-31
Oryza alta GWHAZTO00000022 6 CH_oal_538 4 6 0.000000179404
Oryza alta GWHAZTO00000003 6 CH_oal_905 3 3 0.0000208441
Oryza brachyantha 10 6 CH_obr_34 7 10 2.06139e-16
Oryza sativa ssp. indica Chr10 6 CH_osaindica_219 4 4 0.0000000169269
Oryza sativa ssp. indica Chr3 6 CH_osaindica_279 4 6 0.000000253586
Oryza sativa ssp. indica Chr3 6 CH_osaindica_512 3 4 0.0000873166
Oryza sativa ssp. indica Chr10 6 CH_osaindica_52 8 12 2.12208e-18
Oryza sativa Kitaake Chr10 6 CH_osak_170 5 5 0.0000000000377903
Oryza sativa Kitaake Chr3 6 CH_osak_304 4 4 0.0000000394909
Oryza sativa Kitaake Chr10 6 CH_osak_41 9 11 1.27929e-21
Oryza sativa Kitaake Chr3 6 CH_osak_560 3 3 0.00004009
Oryza sativa ssp. japonica chr03 6 CH_osa_425 3 3 0.0000207517
Oryza sativa ssp. japonica chr03 6 CH_osa_426 3 3 0.0000207517
Oryza sativa ssp. japonica chr04 6 CH_osa_427 3 3 0.0000207517
Oryza sativa ssp. japonica chr10 6 CH_osa_531 3 4 0.000082957
Oryza sativa ssp. japonica chr10 6 CH_osa_63 7 9 2.06873e-16
Oropetium thomaeum Chromosome_4 6 CH_oth_163 3 4 0.00000620252
Oropetium thomaeum Chromosome_1 6 CH_oth_164 3 3 0.00000620252
Phyllostachys edulis hic_scaffold_15 6 CH_ped_480 3 3 0.00000728431
Phyllostachys edulis hic_scaffold_15 6 CH_ped_543 3 4 0.000029126
Phyllostachys edulis hic_scaffold_13 6 CH_ped_624 3 5 0.0000727867
Panicum hallii Chr09 6 CH_pha_14 10 13 2.00659e-24
Panicum hallii Chr02 6 CH_pha_227 4 4 0.0000000273038
Panicum hallii Chr07 6 CH_pha_79 6 6 0.0000000000000200579
Populus trichocarpa Chr01 6 CH_ptr_430 3 3 0.00000340777
Sorghum bicolor Chr04 6 CH_sbi_17 12 18 3.3225e-28
Sorghum bicolor Chr06 6 CH_sbi_315 4 5 0.000000223421
Sorghum bicolor Chr01 6 CH_sbi_500 3 3 0.0000435559
Sorghum bicolor Chr08 6 CH_sbi_67 7 7 4.05441e-17
Secale cereale GWHASIY00000005 6 CH_sce_21 12 23 2.12947e-26
Secale cereale GWHASIY00000001 6 CH_sce_234 5 6 0.000000000264873
Secale cereale GWHASIY00000005 6 CH_sce_834 3 3 0.0000472009
Sequoiadendron giganteum chr5 6 CH_sgi_625 6 80 0.00000000005169
Setaria italica scaffold_7 6 CH_sit_164 5 6 0.000000000033586
Setaria italica scaffold_9 6 CH_sit_23 9 9 5.71063e-25
Solanum lycopersicum SL4.0ch03 6 CH_sly_2 16 19 1.25911e-43
Solanum lycopersicum SL4.0ch08 6 CH_sly_84 7 9 3.89781e-16
Saccharum spontaneum Chr5B 6 CH_ssp_1048 3 3 0.0000167361
Saccharum spontaneum Chr5B 6 CH_ssp_1049 3 3 0.0000167361
Saccharum spontaneum Chr5D 6 CH_ssp_1050 3 3 0.0000167361
Saccharum spontaneum Chr4B 6 CH_ssp_1051 3 3 0.0000167361
Saccharum spontaneum Chr1A 6 CH_ssp_1927 3 7 0.000584752
Saccharum spontaneum Chr1D 6 CH_ssp_284 5 9 0.000000000647667
Saccharum spontaneum Chr5C 6 CH_ssp_376 4 4 0.00000000938392
Saccharum spontaneum Chr1D 6 CH_ssp_870 4 12 0.00000462831
Setaria viridis Chr_07 6 CH_svi_175 5 7 0.000000000114636
Setaria viridis Chr_09 6 CH_svi_26 9 9 5.38335e-25
Triticum aestivum Chr1D 6 CH_tae_1478 4 5 0.00000271156
Triticum aestivum ChrUnknown 6 CH_tae_2046 6 66 0.0000992684
Triticum aestivum Chr4D 6 CH_tae_2363 3 3 0.000365087
Triticum aestivum Chr1B 6 CH_tae_2594 4 15 0.000731483
Triticum aestivum Chr5A 6 CH_tae_349 7 8 0.0000000000000137381
Triticum aestivum Chr4B 6 CH_tae_4 26 37 5.34373e-61
Triticum aestivum Chr7A 6 CH_tae_500 6 7 0.00000000000823821
Triticum aestivum Chr7D 6 CH_tae_501 6 7 0.00000000000823821
Triticum aestivum Chr7A 6 CH_tae_551 6 8 0.0000000000329113
Triticum aestivum Chr4B 6 CH_tae_705 5 5 0.000000000802419
Triticum aestivum Chr1A 6 CH_tae_706 5 5 0.000000000802419
Triticum aestivum Chr7B 6 CH_tae_80 11 12 8.75746e-26
Triticum dicoccoides 5B 6 CH_tdi_1079 3 4 0.000301962
Triticum dicoccoides 2B 6 CH_tdi_1080 3 4 0.000301962
Triticum dicoccoides 7B 6 CH_tdi_139 6 6 0.000000000000074291
Triticum dicoccoides 5A 6 CH_tdi_157 6 7 0.000000000000519599
Triticum dicoccoides 7A 6 CH_tdi_221 5 5 0.0000000000758331
Triticum dicoccoides 1A 6 CH_tdi_256 5 6 0.00000000045462
Triticum dicoccoides 4B 6 CH_tdi_32 9 9 6.36808e-23
Triticum dicoccoides 1B 6 CH_tdi_446 5 15 0.000000225841
Triticum dicoccoides 2A 6 CH_tdi_874 3 3 0.0000755487
Triticum turgidum chr2A 6 CH_ttu_1358 3 5 0.000733152
Triticum turgidum chr5A 6 CH_ttu_136 7 9 0.00000000000000255755
Triticum turgidum chr1A 6 CH_ttu_264 5 5 0.0000000000745988
Triticum turgidum chr7B 6 CH_ttu_265 5 5 0.0000000000745988
Triticum turgidum chr1B 6 CH_ttu_473 4 4 0.0000000745871
Triticum turgidum chr4B 6 CH_ttu_9 14 15 5.34182e-37
Zoysia japonica ssp. nagirizaki Zjn_sc00053.1 6 CH_zjn_317 4 27 0.0000464036
Zea mays B73 9 6 CH_zma_25 7 7 3.70188e-18
Zea mays B73 10 6 CH_zma_286 3 3 0.0000176281
Zea mays B73 1 6 CH_zma_287 3 3 0.0000176281

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001