Functional clusters
Information
- Type InterPro
- Description Non-haem dioxygenase N-terminal domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_117 | 5 | CH_aag_246 | 3 | 3 | 0.000189378 |
| Anthoceros agrestis | Sc2ySwM_117 | 5 | CH_aag_247 | 3 | 3 | 0.000189378 |
| Allium sativum | chr1 | 5 | CH_asa_189 | 9 | 34 | 0.0000000000216062 |
| Aegilops tauschii | 2D | 5 | CH_ata_64 | 8 | 10 | 0.00000000000000675646 |
| Arabidopsis thaliana | Chr5 | 5 | CH_ath_232 | 4 | 4 | 0.000000224589 |
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_272 | 4 | 5 | 0.00000112176 |
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_340 | 4 | 8 | 0.0000156548 |
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_451 | 3 | 3 | 0.000170414 |
| Amborella trichopoda | AmTr_v1.0_scaffold00059 | 5 | CH_atr_320 | 4 | 6 | 0.000011731 |
| Brachypodium distachyon | Bd3 | 5 | CH_bdi_553 | 3 | 3 | 0.000433975 |
| Brachypodium distachyon | Bd3 | 5 | CH_bdi_554 | 3 | 3 | 0.000433975 |
| Calamus simplicifolius | scaffold675 | 5 | CH_calsi_187 | 4 | 4 | 0.000000654218 |
| Cenchrus purpureus | GWHAORA00000006 | 5 | CH_cpu_1272 | 4 | 5 | 0.0000900801 |
| Cenchrus purpureus | GWHAORA00000001 | 5 | CH_cpu_1273 | 4 | 5 | 0.0000900801 |
| Cenchrus purpureus | GWHAORA00000006 | 5 | CH_cpu_612 | 5 | 5 | 0.0000000732013 |
| Cenchrus purpureus | GWHAORA00000012 | 5 | CH_cpu_746 | 5 | 6 | 0.000000437725 |
| Dioscorea dumetorum | contig119 | 5 | CH_ddu_32 | 10 | 15 | 2.64459e-17 |
| Digitaria exilis | Dexi_CM05836_chr09B | 5 | CH_dex_349 | 6 | 7 | 0.00000000129391 |
| Eragrostis curvula | 3 | 5 | CH_ecu_1322 | 4 | 7 | 0.000319153 |
| Eragrostis curvula | Contig335 | 5 | CH_ecu_241 | 9 | 14 | 0.0000000000000104707 |
| Eragrostis curvula | 1 | 5 | CH_ecu_634 | 7 | 22 | 0.0000000690657 |
| Eragrostis curvula | 3 | 5 | CH_ecu_94 | 11 | 11 | 6.50884e-23 |
| Eragrostis curvula | 2 | 5 | CH_ecu_944 | 4 | 4 | 0.00000919857 |
| Eragrostis curvula | Contig30 | 5 | CH_ecu_945 | 4 | 4 | 0.00000919857 |
| Glycine max | Gm02 | 5 | CH_gma_310 | 5 | 5 | 0.0000000529767 |
| Glycine max | Gm09 | 5 | CH_gma_311 | 5 | 5 | 0.0000000529767 |
| Glycine max | Gm02 | 5 | CH_gma_591 | 4 | 5 | 0.0000668864 |
| Hordeum vulgare | chr2H | 5 | CH_hvu_255 | 5 | 6 | 0.0000000232213 |
| Hordeum vulgare | chr6H | 5 | CH_hvu_335 | 5 | 9 | 0.000000484778 |
| Hordeum vulgare | chr2H | 5 | CH_hvu_429 | 5 | 14 | 0.00000762721 |
| Hordeum vulgare | chr7H | 5 | CH_hvu_800 | 4 | 12 | 0.000803102 |
| Lolium perenne | Lp_chr6_0 | 5 | CH_lpe_301 | 4 | 4 | 0.000000533913 |
| Lolium perenne | Lp_chr7_0.1 | 5 | CH_lpe_620 | 3 | 3 | 0.000316387 |
| Musa acuminata | chr06 | 5 | CH_mac_61 | 6 | 7 | 0.000000000057964 |
| Magnolia biondii | Chr02 | 5 | CH_mbi_1190 | 3 | 4 | 0.000708401 |
| Magnolia biondii | Chr03 | 5 | CH_mbi_535 | 4 | 5 | 0.00000139766 |
| Miscanthus sinensis | Chr02 | 5 | CH_msi_1189 | 3 | 3 | 0.000983975 |
| Miscanthus sinensis | Chr01 | 5 | CH_msi_1190 | 3 | 3 | 0.000983975 |
| Miscanthus sinensis | Chr19 | 5 | CH_msi_460 | 5 | 9 | 0.000000751015 |
| Miscanthus sinensis | Chr14 | 5 | CH_msi_591 | 4 | 5 | 0.0000121741 |
| Oryza brachyantha | 10 | 5 | CH_obr_282 | 4 | 7 | 0.00000603779 |
| Oryza sativa ssp. indica | Chr10 | 5 | CH_osaindica_281 | 5 | 11 | 0.000000263932 |
| Oryza sativa ssp. indica | Chr10 | 5 | CH_osaindica_600 | 3 | 3 | 0.000292847 |
| Oryza sativa Kitaake | Chr6 | 5 | CH_osak_245 | 5 | 5 | 0.00000000294947 |
| Oryza sativa Kitaake | Chr9 | 5 | CH_osak_409 | 4 | 4 | 0.00000124756 |
| Oryza sativa Kitaake | Chr10 | 5 | CH_osak_805 | 3 | 3 | 0.000521493 |
| Oryza sativa ssp. japonica | chr10 | 5 | CH_osa_152 | 7 | 19 | 0.00000000024154 |
| Oryza sativa ssp. japonica | chr09 | 5 | CH_osa_309 | 4 | 4 | 0.000000852717 |
| Oropetium thomaeum | Chromosome_1 | 5 | CH_oth_373 | 3 | 3 | 0.000472759 |
| Phyllostachys edulis | hic_scaffold_23 | 5 | CH_ped_420 | 4 | 4 | 0.00000216508 |
| Physcomitrium patens | Chr18 | 5 | CH_ppa_195 | 3 | 3 | 0.00011728 |
| Sorghum bicolor | Chr08 | 5 | CH_sbi_484 | 4 | 6 | 0.0000326811 |
| Sorghum bicolor | Chr06 | 5 | CH_sbi_589 | 4 | 8 | 0.000151831 |
| Sorghum bicolor | Chr01 | 5 | CH_sbi_742 | 3 | 3 | 0.000785286 |
| Secale cereale | GWHASIY00000004 | 5 | CH_sce_24 | 16 | 28 | 9.78894e-26 |
| Secale cereale | GWHASIY00000007 | 5 | CH_sce_713 | 6 | 19 | 0.000015738 |
| Secale cereale | GWHASIY00000007 | 5 | CH_sce_756 | 4 | 4 | 0.0000259187 |
| Secale cereale | GWHASIY00000008 | 5 | CH_sce_923 | 4 | 5 | 0.000129086 |
| Sequoiadendron giganteum | chr7 | 5 | CH_sgi_1186 | 5 | 5 | 0.000000418248 |
| Sequoiadendron giganteum | chr5 | 5 | CH_sgi_1903 | 4 | 4 | 0.0000665501 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_2350 | 4 | 5 | 0.000331069 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_399 | 8 | 8 | 0.00000000000010144 |
| Setaria italica | scaffold_9 | 5 | CH_sit_247 | 5 | 5 | 0.00000000949078 |
| Setaria italica | scaffold_3 | 5 | CH_sit_456 | 4 | 4 | 0.00000314419 |
| Solanum lycopersicum | SL4.0ch07 | 5 | CH_sly_914 | 4 | 8 | 0.000624333 |
| Spirodela polyrhiza | pseudo17 | 5 | CH_spo_168 | 4 | 7 | 0.0000065228 |
| Saccharum spontaneum | Chr7A | 5 | CH_ssp_1129 | 4 | 5 | 0.0000322932 |
| Saccharum spontaneum | Chr5A | 5 | CH_ssp_1130 | 4 | 5 | 0.0000322932 |
| Saccharum spontaneum | Chr2D | 5 | CH_ssp_508 | 5 | 6 | 0.000000113717 |
| Setaria viridis | Chr_09 | 5 | CH_svi_241 | 5 | 5 | 0.00000000463122 |
| Setaria viridis | Chr_03 | 5 | CH_svi_434 | 4 | 4 | 0.00000181123 |
| Triticum aestivum | Chr2A | 5 | CH_tae_1274 | 5 | 6 | 0.000000563461 |
| Triticum aestivum | Chr5A | 5 | CH_tae_1797 | 4 | 4 | 0.0000243886 |
| Triticum aestivum | Chr6A | 5 | CH_tae_1798 | 4 | 4 | 0.0000243886 |
| Triticum aestivum | Chr4D | 5 | CH_tae_1799 | 4 | 4 | 0.0000243886 |
| Triticum aestivum | Chr2A | 5 | CH_tae_1873 | 5 | 11 | 0.0000426925 |
| Triticum aestivum | Chr2D | 5 | CH_tae_2173 | 5 | 14 | 0.00018322 |
| Triticum aestivum | Chr7B | 5 | CH_tae_411 | 8 | 10 | 0.000000000000239243 |
| Triticum aestivum | Chr7D | 5 | CH_tae_512 | 7 | 8 | 0.0000000000111288 |
| Triticum aestivum | Chr2D | 5 | CH_tae_513 | 7 | 8 | 0.0000000000111288 |
| Triticum dicoccoides | 2B | 5 | CH_tdi_623 | 5 | 10 | 0.00000447985 |
| Triticum turgidum | chr7B | 5 | CH_ttu_160 | 8 | 10 | 0.0000000000000704854 |
| Triticum turgidum | chr2A | 5 | CH_ttu_728 | 5 | 9 | 0.00000457498 |
| Triticum turgidum | chr2B | 5 | CH_ttu_878 | 5 | 12 | 0.0000285037 |
| Vanilla planifolia | CM028151.1 | 5 | CH_vpl_666 | 3 | 3 | 0.000599059 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00049.1 | 5 | CH_zjn_239 | 4 | 7 | 0.0000168571 |
| Zea mays B73 | 10 | 5 | CH_zma_459 | 4 | 14 | 0.000384668 |
| Zostera marina | Chr04 | 5 | CH_zosmarina_10 | 10 | 33 | 3.93846e-16 |
| Anthoceros agrestis | Sc2ySwM_117 | 6 | CH_aag_246 | 3 | 3 | 0.000189378 |
| Anthoceros agrestis | Sc2ySwM_117 | 6 | CH_aag_247 | 3 | 3 | 0.000189378 |
| Allium sativum | chr1 | 6 | CH_asa_189 | 9 | 34 | 0.0000000000216062 |
| Aegilops tauschii | 2D | 6 | CH_ata_64 | 8 | 10 | 0.00000000000000675646 |
| Arabidopsis thaliana | Chr5 | 6 | CH_ath_232 | 4 | 4 | 0.000000224589 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_272 | 4 | 5 | 0.00000112176 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_340 | 4 | 8 | 0.0000156548 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_451 | 3 | 3 | 0.000170414 |
| Amborella trichopoda | AmTr_v1.0_scaffold00059 | 6 | CH_atr_320 | 4 | 6 | 0.000011731 |
| Brachypodium distachyon | Bd3 | 6 | CH_bdi_553 | 3 | 3 | 0.000433975 |
| Brachypodium distachyon | Bd3 | 6 | CH_bdi_554 | 3 | 3 | 0.000433975 |
| Calamus simplicifolius | scaffold675 | 6 | CH_calsi_187 | 4 | 4 | 0.000000654218 |
| Cenchrus purpureus | GWHAORA00000006 | 6 | CH_cpu_1272 | 4 | 5 | 0.0000900801 |
| Cenchrus purpureus | GWHAORA00000001 | 6 | CH_cpu_1273 | 4 | 5 | 0.0000900801 |
| Cenchrus purpureus | GWHAORA00000006 | 6 | CH_cpu_612 | 5 | 5 | 0.0000000732013 |
| Cenchrus purpureus | GWHAORA00000012 | 6 | CH_cpu_746 | 5 | 6 | 0.000000437725 |
| Dioscorea dumetorum | contig119 | 6 | CH_ddu_32 | 10 | 15 | 2.64459e-17 |
| Digitaria exilis | Dexi_CM05836_chr09B | 6 | CH_dex_349 | 6 | 7 | 0.00000000129391 |
| Eragrostis curvula | 3 | 6 | CH_ecu_1322 | 4 | 7 | 0.000319153 |
| Eragrostis curvula | Contig335 | 6 | CH_ecu_241 | 9 | 14 | 0.0000000000000104707 |
| Eragrostis curvula | 1 | 6 | CH_ecu_634 | 7 | 22 | 0.0000000690657 |
| Eragrostis curvula | 3 | 6 | CH_ecu_94 | 11 | 11 | 6.50884e-23 |
| Eragrostis curvula | 2 | 6 | CH_ecu_944 | 4 | 4 | 0.00000919857 |
| Eragrostis curvula | Contig30 | 6 | CH_ecu_945 | 4 | 4 | 0.00000919857 |
| Glycine max | Gm02 | 6 | CH_gma_310 | 5 | 5 | 0.0000000529767 |
| Glycine max | Gm09 | 6 | CH_gma_311 | 5 | 5 | 0.0000000529767 |
| Glycine max | Gm02 | 6 | CH_gma_591 | 4 | 5 | 0.0000668864 |
| Hordeum vulgare | chr2H | 6 | CH_hvu_255 | 5 | 6 | 0.0000000232213 |
| Hordeum vulgare | chr6H | 6 | CH_hvu_335 | 5 | 9 | 0.000000484778 |
| Hordeum vulgare | chr2H | 6 | CH_hvu_429 | 5 | 14 | 0.00000762721 |
| Hordeum vulgare | chr7H | 6 | CH_hvu_800 | 4 | 12 | 0.000803102 |
| Lolium perenne | Lp_chr6_0 | 6 | CH_lpe_301 | 4 | 4 | 0.000000533913 |
| Lolium perenne | Lp_chr7_0.1 | 6 | CH_lpe_620 | 3 | 3 | 0.000316387 |
| Musa acuminata | chr06 | 6 | CH_mac_61 | 6 | 7 | 0.000000000057964 |
| Magnolia biondii | Chr02 | 6 | CH_mbi_1190 | 3 | 4 | 0.000708401 |
| Magnolia biondii | Chr03 | 6 | CH_mbi_535 | 4 | 5 | 0.00000139766 |
| Miscanthus sinensis | Chr02 | 6 | CH_msi_1189 | 3 | 3 | 0.000983975 |
| Miscanthus sinensis | Chr01 | 6 | CH_msi_1190 | 3 | 3 | 0.000983975 |
| Miscanthus sinensis | Chr19 | 6 | CH_msi_460 | 5 | 9 | 0.000000751015 |
| Miscanthus sinensis | Chr14 | 6 | CH_msi_591 | 4 | 5 | 0.0000121741 |
| Oryza brachyantha | 10 | 6 | CH_obr_282 | 4 | 7 | 0.00000603779 |
| Oryza sativa ssp. indica | Chr10 | 6 | CH_osaindica_281 | 5 | 11 | 0.000000263932 |
| Oryza sativa ssp. indica | Chr10 | 6 | CH_osaindica_600 | 3 | 3 | 0.000292847 |
| Oryza sativa Kitaake | Chr6 | 6 | CH_osak_245 | 5 | 5 | 0.00000000294947 |
| Oryza sativa Kitaake | Chr9 | 6 | CH_osak_409 | 4 | 4 | 0.00000124756 |
| Oryza sativa Kitaake | Chr10 | 6 | CH_osak_805 | 3 | 3 | 0.000521493 |
| Oryza sativa ssp. japonica | chr10 | 6 | CH_osa_152 | 7 | 19 | 0.00000000024154 |
| Oryza sativa ssp. japonica | chr09 | 6 | CH_osa_309 | 4 | 4 | 0.000000852717 |
| Oropetium thomaeum | Chromosome_1 | 6 | CH_oth_373 | 3 | 3 | 0.000472759 |
| Phyllostachys edulis | hic_scaffold_23 | 6 | CH_ped_420 | 4 | 4 | 0.00000216508 |
| Physcomitrium patens | Chr18 | 6 | CH_ppa_195 | 3 | 3 | 0.00011728 |
| Sorghum bicolor | Chr08 | 6 | CH_sbi_484 | 4 | 6 | 0.0000326811 |
| Sorghum bicolor | Chr06 | 6 | CH_sbi_589 | 4 | 8 | 0.000151831 |
| Sorghum bicolor | Chr01 | 6 | CH_sbi_742 | 3 | 3 | 0.000785286 |
| Secale cereale | GWHASIY00000004 | 6 | CH_sce_24 | 16 | 28 | 9.78894e-26 |
| Secale cereale | GWHASIY00000007 | 6 | CH_sce_713 | 6 | 19 | 0.000015738 |
| Secale cereale | GWHASIY00000007 | 6 | CH_sce_756 | 4 | 4 | 0.0000259187 |
| Secale cereale | GWHASIY00000008 | 6 | CH_sce_923 | 4 | 5 | 0.000129086 |
| Sequoiadendron giganteum | chr7 | 6 | CH_sgi_1186 | 5 | 5 | 0.000000418248 |
| Sequoiadendron giganteum | chr5 | 6 | CH_sgi_1903 | 4 | 4 | 0.0000665501 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_2350 | 4 | 5 | 0.000331069 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_399 | 8 | 8 | 0.00000000000010144 |
| Setaria italica | scaffold_9 | 6 | CH_sit_247 | 5 | 5 | 0.00000000949078 |
| Setaria italica | scaffold_3 | 6 | CH_sit_456 | 4 | 4 | 0.00000314419 |
| Solanum lycopersicum | SL4.0ch07 | 6 | CH_sly_914 | 4 | 8 | 0.000624333 |
| Spirodela polyrhiza | pseudo17 | 6 | CH_spo_168 | 4 | 7 | 0.0000065228 |
| Saccharum spontaneum | Chr7A | 6 | CH_ssp_1129 | 4 | 5 | 0.0000322932 |
| Saccharum spontaneum | Chr5A | 6 | CH_ssp_1130 | 4 | 5 | 0.0000322932 |
| Saccharum spontaneum | Chr2D | 6 | CH_ssp_508 | 5 | 6 | 0.000000113717 |
| Setaria viridis | Chr_09 | 6 | CH_svi_241 | 5 | 5 | 0.00000000463122 |
| Setaria viridis | Chr_03 | 6 | CH_svi_434 | 4 | 4 | 0.00000181123 |
| Triticum aestivum | Chr2A | 6 | CH_tae_1274 | 5 | 6 | 0.000000563461 |
| Triticum aestivum | Chr5A | 6 | CH_tae_1797 | 4 | 4 | 0.0000243886 |
| Triticum aestivum | Chr6A | 6 | CH_tae_1798 | 4 | 4 | 0.0000243886 |
| Triticum aestivum | Chr4D | 6 | CH_tae_1799 | 4 | 4 | 0.0000243886 |
| Triticum aestivum | Chr2A | 6 | CH_tae_1873 | 5 | 11 | 0.0000426925 |
| Triticum aestivum | Chr2D | 6 | CH_tae_2173 | 5 | 14 | 0.00018322 |
| Triticum aestivum | Chr7B | 6 | CH_tae_411 | 8 | 10 | 0.000000000000239243 |
| Triticum aestivum | Chr7D | 6 | CH_tae_512 | 7 | 8 | 0.0000000000111288 |
| Triticum aestivum | Chr2D | 6 | CH_tae_513 | 7 | 8 | 0.0000000000111288 |
| Triticum dicoccoides | 2B | 6 | CH_tdi_623 | 5 | 10 | 0.00000447985 |
| Triticum turgidum | chr7B | 6 | CH_ttu_160 | 8 | 10 | 0.0000000000000704854 |
| Triticum turgidum | chr2A | 6 | CH_ttu_728 | 5 | 9 | 0.00000457498 |
| Triticum turgidum | chr2B | 6 | CH_ttu_878 | 5 | 12 | 0.0000285037 |
| Vanilla planifolia | CM028151.1 | 6 | CH_vpl_666 | 3 | 3 | 0.000599059 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00049.1 | 6 | CH_zjn_239 | 4 | 7 | 0.0000168571 |
| Zea mays B73 | 10 | 6 | CH_zma_459 | 4 | 14 | 0.000384668 |
| Zostera marina | Chr04 | 6 | CH_zosmarina_10 | 10 | 33 | 3.93846e-16 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |