Functional clusters
Information
- Type InterPro
- Description Protein phosphatase 2C family
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Cenchrus purpureus | GWHAORA00000003 | 5 | CH_cpu_1331 | 3 | 3 | 0.000126952 |
| Digitaria exilis | Dexi_CM05836_chr08B | 5 | CH_dex_1014 | 3 | 3 | 0.0000766661 |
| Digitaria exilis | Dexi_CM05836_chr01B | 5 | CH_dex_1015 | 3 | 3 | 0.0000766661 |
| Magnolia biondii | Chr15 | 5 | CH_mbi_1285 | 3 | 8 | 0.000980026 |
| Magnolia biondii | Chr18 | 5 | CH_mbi_367 | 5 | 17 | 0.0000000516464 |
| Oryza alta | GWHAZTO00000014 | 5 | CH_oal_465 | 7 | 75 | 0.0000000452425 |
| Oryza alta | GWHAZTO00000002 | 5 | CH_oal_815 | 6 | 79 | 0.00000803697 |
| Oryza sativa ssp. indica | Chr2 | 5 | CH_osaindica_143 | 8 | 68 | 0.000000000134677 |
| Oryza sativa Kitaake | Chr2 | 5 | CH_osak_222 | 8 | 76 | 0.000000000773109 |
| Oryza sativa ssp. japonica | chr02 | 5 | CH_osa_138 | 6 | 14 | 0.0000000000514876 |
| Sequoiadendron giganteum | chr3 | 5 | CH_sgi_1421 | 3 | 3 | 0.00000630447 |
| Setaria italica | scaffold_1 | 5 | CH_sit_551 | 3 | 3 | 0.0000360834 |
| Setaria viridis | Chr_01 | 5 | CH_svi_344 | 4 | 5 | 0.00000017515 |
| Zea mays B73 | 4 | 5 | CH_zma_358 | 3 | 3 | 0.0000816697 |
| Cenchrus purpureus | GWHAORA00000003 | 6 | CH_cpu_1331 | 3 | 3 | 0.000126952 |
| Digitaria exilis | Dexi_CM05836_chr08B | 6 | CH_dex_1014 | 3 | 3 | 0.0000766661 |
| Digitaria exilis | Dexi_CM05836_chr01B | 6 | CH_dex_1015 | 3 | 3 | 0.0000766661 |
| Magnolia biondii | Chr15 | 6 | CH_mbi_1285 | 3 | 8 | 0.000980026 |
| Magnolia biondii | Chr18 | 6 | CH_mbi_367 | 5 | 17 | 0.0000000516464 |
| Oryza alta | GWHAZTO00000014 | 6 | CH_oal_465 | 7 | 75 | 0.0000000452425 |
| Oryza alta | GWHAZTO00000002 | 6 | CH_oal_815 | 6 | 79 | 0.00000803697 |
| Oryza sativa ssp. indica | Chr2 | 6 | CH_osaindica_143 | 8 | 68 | 0.000000000134677 |
| Oryza sativa Kitaake | Chr2 | 6 | CH_osak_222 | 8 | 76 | 0.000000000773109 |
| Oryza sativa ssp. japonica | chr02 | 6 | CH_osa_138 | 6 | 14 | 0.0000000000514876 |
| Sequoiadendron giganteum | chr3 | 6 | CH_sgi_1421 | 3 | 3 | 0.00000630447 |
| Setaria italica | scaffold_1 | 6 | CH_sit_551 | 3 | 3 | 0.0000360834 |
| Setaria viridis | Chr_01 | 6 | CH_svi_344 | 4 | 5 | 0.00000017515 |
| Zea mays B73 | 4 | 6 | CH_zma_358 | 3 | 3 | 0.0000816697 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |