Functional clusters
Information
- Type InterPro
- Description Plant methyltransferase dimerisation
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Ananas comosus | LG03 | 5 | CH_aco_118 | 4 | 22 | 0.0000226159 |
| Asparagus officinalis | AsparagusV1_10 | 5 | CH_aof_72 | 4 | 13 | 0.000000457517 |
| Aegilops tauschii | 7D | 5 | CH_ata_499 | 3 | 4 | 0.000103813 |
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_171 | 4 | 8 | 0.00000000673696 |
| Brachypodium distachyon | Bd2 | 5 | CH_bdi_145 | 4 | 5 | 0.000000021046 |
| Brachypodium distachyon | Bd4 | 5 | CH_bdi_627 | 3 | 10 | 0.000907592 |
| Cenchrus purpureus | GWHAORA00000002 | 5 | CH_cpu_1707 | 5 | 58 | 0.000917404 |
| Cenchrus purpureus | GWHAORA00000008 | 5 | CH_cpu_373 | 5 | 5 | 0.000000000211484 |
| Cenchrus purpureus | GWHAORA00000009 | 5 | CH_cpu_438 | 6 | 16 | 0.00000000204654 |
| Dioscorea dumetorum | contig119 | 5 | CH_ddu_124 | 4 | 4 | 0.0000000202593 |
| Dioscorea dumetorum | contig750 | 5 | CH_ddu_31 | 8 | 13 | 9.44431e-18 |
| Digitaria exilis | Dexi_CM05836_chr03B | 5 | CH_dex_1106 | 3 | 3 | 0.000122555 |
| Digitaria exilis | Dexi_CM05836_chr05B | 5 | CH_dex_498 | 5 | 10 | 0.0000000463519 |
| Digitaria exilis | Dexi_CM05836_chr05A | 5 | CH_dex_653 | 4 | 5 | 0.000000757 |
| Eragrostis curvula | 6 | 5 | CH_ecu_1258 | 3 | 3 | 0.000199703 |
| Eragrostis curvula | Contig33 | 5 | CH_ecu_346 | 10 | 79 | 0.00000000000349297 |
| Eragrostis curvula | Contig360 | 5 | CH_ecu_940 | 6 | 49 | 0.00000913733 |
| Elaeis guineensis | EG5.1_Chr3 | 5 | CH_egu_94 | 4 | 5 | 0.0000000232011 |
| Glycine max | Gm14 | 5 | CH_gma_136 | 5 | 5 | 0.0000000000116663 |
| Glycine max | Gm10 | 5 | CH_gma_525 | 3 | 3 | 0.0000230362 |
| Glycine max | Gm06 | 5 | CH_gma_526 | 3 | 3 | 0.0000230362 |
| Glycine max | Gm18 | 5 | CH_gma_574 | 5 | 58 | 0.0000518144 |
| Glycine max | Gm06 | 5 | CH_gma_767 | 3 | 5 | 0.000230104 |
| Hordeum vulgare | chr1H | 5 | CH_hvu_161 | 5 | 6 | 0.0000000000802847 |
| Hordeum vulgare | chr7H | 5 | CH_hvu_494 | 3 | 3 | 0.0000244094 |
| Hordeum vulgare | chr7H | 5 | CH_hvu_584 | 3 | 4 | 0.0000975808 |
| Lolium perenne | Lp_chr6_0 | 5 | CH_lpe_477 | 3 | 4 | 0.0000566265 |
| Lolium perenne | Lp_chr1_0 | 5 | CH_lpe_92 | 6 | 14 | 0.00000000000753588 |
| Musa acuminata | chr09 | 5 | CH_mac_410 | 3 | 6 | 0.000632546 |
| Magnolia biondii | Chr13 | 5 | CH_mbi_585 | 5 | 30 | 0.0000033635 |
| Marchantia polymorpha | scaffold_15 | 5 | CH_mpo_47 | 4 | 4 | 0.00000000200081 |
| Oryza sativa ssp. indica | Chr12 | 5 | CH_osaindica_270 | 4 | 6 | 0.000000169853 |
| Oryza sativa ssp. indica | Chr4 | 5 | CH_osaindica_498 | 3 | 4 | 0.0000649791 |
| Oryza sativa Kitaake | Chr12 | 5 | CH_osak_559 | 4 | 15 | 0.0000379328 |
| Oryza sativa Kitaake | Chr4 | 5 | CH_osak_644 | 3 | 4 | 0.000124326 |
| Oryza sativa ssp. japonica | chr11 | 5 | CH_osa_103 | 6 | 10 | 0.000000000000920346 |
| Oryza sativa ssp. japonica | chr12 | 5 | CH_osa_420 | 4 | 16 | 0.0000189768 |
| Oryza sativa ssp. japonica | chr07 | 5 | CH_osa_770 | 3 | 8 | 0.000853794 |
| Phyllostachys edulis | hic_scaffold_13 | 5 | CH_ped_247 | 4 | 4 | 0.00000000941206 |
| Phyllostachys edulis | hic_scaffold_9 | 5 | CH_ped_517 | 3 | 3 | 0.0000149023 |
| Populus trichocarpa | Chr02 | 5 | CH_ptr_160 | 5 | 5 | 0.0000000000168601 |
| Populus trichocarpa | Chr13 | 5 | CH_ptr_573 | 3 | 4 | 0.0000993613 |
| Sorghum bicolor | Chr07 | 5 | CH_sbi_396 | 4 | 7 | 0.00000193284 |
| Secale cereale | GWHASIY00000005 | 5 | CH_sce_1251 | 3 | 4 | 0.000542689 |
| Secale cereale | GWHASIY00000001 | 5 | CH_sce_237 | 5 | 5 | 0.000000000266225 |
| Secale cereale | GWHASIY00000004 | 5 | CH_sce_434 | 4 | 4 | 0.000000191704 |
| Secale cereale | GWHASIY00000003 | 5 | CH_sce_934 | 3 | 3 | 0.000135819 |
| Setaria italica | scaffold_8 | 5 | CH_sit_547 | 5 | 46 | 0.0000315165 |
| Setaria italica | scaffold_3 | 5 | CH_sit_649 | 3 | 4 | 0.00012088 |
| Triticum aestivum | Chr5D | 5 | CH_tae_1690 | 4 | 7 | 0.0000124451 |
| Triticum aestivum | Chr1A | 5 | CH_tae_214 | 8 | 8 | 1.06393e-18 |
| Triticum aestivum | Chr7D | 5 | CH_tae_2263 | 3 | 3 | 0.000266697 |
| Triticum aestivum | Chr4D | 5 | CH_tae_2264 | 3 | 3 | 0.000266697 |
| Triticum aestivum | Chr6B | 5 | CH_tae_670 | 5 | 5 | 0.000000000473799 |
| Triticum dicoccoides | 4A | 5 | CH_tdi_1023 | 3 | 4 | 0.000241773 |
| Triticum turgidum | chr3B | 5 | CH_ttu_1026 | 3 | 3 | 0.0000949793 |
| Triticum turgidum | chr1A | 5 | CH_ttu_1233 | 3 | 4 | 0.000379595 |
| Triticum turgidum | chr2B | 5 | CH_ttu_1405 | 3 | 5 | 0.000948183 |
| Triticum turgidum | chr1B | 5 | CH_ttu_1406 | 3 | 5 | 0.000948183 |
| Triticum turgidum | chr1A | 5 | CH_ttu_196 | 6 | 7 | 0.000000000000869348 |
| Vanilla planifolia | CM028163.1 | 5 | CH_vpl_280 | 3 | 3 | 0.00000933598 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00082.1 | 5 | CH_zjn_150 | 4 | 12 | 0.000000948712 |
| Zea mays B104 | scaffold6.2542 | 5 | CH_zma-b104_13 | 4 | 4 | 0.00000000127465 |
| Zea mays B73 | 6 | 5 | CH_zma_147 | 4 | 5 | 0.0000000299653 |
| Zea mays B73 | 1 | 5 | CH_zma_319 | 3 | 4 | 0.0000407668 |
| Ananas comosus | LG03 | 6 | CH_aco_118 | 4 | 22 | 0.0000226159 |
| Asparagus officinalis | AsparagusV1_10 | 6 | CH_aof_72 | 4 | 13 | 0.000000457517 |
| Aegilops tauschii | 7D | 6 | CH_ata_499 | 3 | 4 | 0.000103813 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_171 | 4 | 8 | 0.00000000673696 |
| Brachypodium distachyon | Bd2 | 6 | CH_bdi_145 | 4 | 5 | 0.000000021046 |
| Brachypodium distachyon | Bd4 | 6 | CH_bdi_627 | 3 | 10 | 0.000907592 |
| Cenchrus purpureus | GWHAORA00000002 | 6 | CH_cpu_1707 | 5 | 58 | 0.000917404 |
| Cenchrus purpureus | GWHAORA00000008 | 6 | CH_cpu_373 | 5 | 5 | 0.000000000211484 |
| Cenchrus purpureus | GWHAORA00000009 | 6 | CH_cpu_438 | 6 | 16 | 0.00000000204654 |
| Dioscorea dumetorum | contig119 | 6 | CH_ddu_124 | 4 | 4 | 0.0000000202593 |
| Dioscorea dumetorum | contig750 | 6 | CH_ddu_31 | 8 | 13 | 9.44431e-18 |
| Digitaria exilis | Dexi_CM05836_chr03B | 6 | CH_dex_1106 | 3 | 3 | 0.000122555 |
| Digitaria exilis | Dexi_CM05836_chr05B | 6 | CH_dex_498 | 5 | 10 | 0.0000000463519 |
| Digitaria exilis | Dexi_CM05836_chr05A | 6 | CH_dex_653 | 4 | 5 | 0.000000757 |
| Eragrostis curvula | 6 | 6 | CH_ecu_1258 | 3 | 3 | 0.000199703 |
| Eragrostis curvula | Contig33 | 6 | CH_ecu_346 | 10 | 79 | 0.00000000000349297 |
| Eragrostis curvula | Contig360 | 6 | CH_ecu_940 | 6 | 49 | 0.00000913733 |
| Elaeis guineensis | EG5.1_Chr3 | 6 | CH_egu_94 | 4 | 5 | 0.0000000232011 |
| Glycine max | Gm14 | 6 | CH_gma_136 | 5 | 5 | 0.0000000000116663 |
| Glycine max | Gm10 | 6 | CH_gma_525 | 3 | 3 | 0.0000230362 |
| Glycine max | Gm06 | 6 | CH_gma_526 | 3 | 3 | 0.0000230362 |
| Glycine max | Gm18 | 6 | CH_gma_574 | 5 | 58 | 0.0000518144 |
| Glycine max | Gm06 | 6 | CH_gma_767 | 3 | 5 | 0.000230104 |
| Hordeum vulgare | chr1H | 6 | CH_hvu_161 | 5 | 6 | 0.0000000000802847 |
| Hordeum vulgare | chr7H | 6 | CH_hvu_494 | 3 | 3 | 0.0000244094 |
| Hordeum vulgare | chr7H | 6 | CH_hvu_584 | 3 | 4 | 0.0000975808 |
| Lolium perenne | Lp_chr6_0 | 6 | CH_lpe_477 | 3 | 4 | 0.0000566265 |
| Lolium perenne | Lp_chr1_0 | 6 | CH_lpe_92 | 6 | 14 | 0.00000000000753588 |
| Musa acuminata | chr09 | 6 | CH_mac_410 | 3 | 6 | 0.000632546 |
| Magnolia biondii | Chr13 | 6 | CH_mbi_585 | 5 | 30 | 0.0000033635 |
| Marchantia polymorpha | scaffold_15 | 6 | CH_mpo_47 | 4 | 4 | 0.00000000200081 |
| Oryza sativa ssp. indica | Chr12 | 6 | CH_osaindica_270 | 4 | 6 | 0.000000169853 |
| Oryza sativa ssp. indica | Chr4 | 6 | CH_osaindica_498 | 3 | 4 | 0.0000649791 |
| Oryza sativa Kitaake | Chr12 | 6 | CH_osak_559 | 4 | 15 | 0.0000379328 |
| Oryza sativa Kitaake | Chr4 | 6 | CH_osak_644 | 3 | 4 | 0.000124326 |
| Oryza sativa ssp. japonica | chr11 | 6 | CH_osa_103 | 6 | 10 | 0.000000000000920346 |
| Oryza sativa ssp. japonica | chr12 | 6 | CH_osa_420 | 4 | 16 | 0.0000189768 |
| Oryza sativa ssp. japonica | chr07 | 6 | CH_osa_770 | 3 | 8 | 0.000853794 |
| Phyllostachys edulis | hic_scaffold_13 | 6 | CH_ped_247 | 4 | 4 | 0.00000000941206 |
| Phyllostachys edulis | hic_scaffold_9 | 6 | CH_ped_517 | 3 | 3 | 0.0000149023 |
| Populus trichocarpa | Chr02 | 6 | CH_ptr_160 | 5 | 5 | 0.0000000000168601 |
| Populus trichocarpa | Chr13 | 6 | CH_ptr_573 | 3 | 4 | 0.0000993613 |
| Sorghum bicolor | Chr07 | 6 | CH_sbi_396 | 4 | 7 | 0.00000193284 |
| Secale cereale | GWHASIY00000005 | 6 | CH_sce_1251 | 3 | 4 | 0.000542689 |
| Secale cereale | GWHASIY00000001 | 6 | CH_sce_237 | 5 | 5 | 0.000000000266225 |
| Secale cereale | GWHASIY00000004 | 6 | CH_sce_434 | 4 | 4 | 0.000000191704 |
| Secale cereale | GWHASIY00000003 | 6 | CH_sce_934 | 3 | 3 | 0.000135819 |
| Setaria italica | scaffold_8 | 6 | CH_sit_547 | 5 | 46 | 0.0000315165 |
| Setaria italica | scaffold_3 | 6 | CH_sit_649 | 3 | 4 | 0.00012088 |
| Triticum aestivum | Chr5D | 6 | CH_tae_1690 | 4 | 7 | 0.0000124451 |
| Triticum aestivum | Chr1A | 6 | CH_tae_214 | 8 | 8 | 1.06393e-18 |
| Triticum aestivum | Chr7D | 6 | CH_tae_2263 | 3 | 3 | 0.000266697 |
| Triticum aestivum | Chr4D | 6 | CH_tae_2264 | 3 | 3 | 0.000266697 |
| Triticum aestivum | Chr6B | 6 | CH_tae_670 | 5 | 5 | 0.000000000473799 |
| Triticum dicoccoides | 4A | 6 | CH_tdi_1023 | 3 | 4 | 0.000241773 |
| Triticum turgidum | chr3B | 6 | CH_ttu_1026 | 3 | 3 | 0.0000949793 |
| Triticum turgidum | chr1A | 6 | CH_ttu_1233 | 3 | 4 | 0.000379595 |
| Triticum turgidum | chr2B | 6 | CH_ttu_1405 | 3 | 5 | 0.000948183 |
| Triticum turgidum | chr1B | 6 | CH_ttu_1406 | 3 | 5 | 0.000948183 |
| Triticum turgidum | chr1A | 6 | CH_ttu_196 | 6 | 7 | 0.000000000000869348 |
| Vanilla planifolia | CM028163.1 | 6 | CH_vpl_280 | 3 | 3 | 0.00000933598 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00082.1 | 6 | CH_zjn_150 | 4 | 12 | 0.000000948712 |
| Zea mays B104 | scaffold6.2542 | 6 | CH_zma-b104_13 | 4 | 4 | 0.00000000127465 |
| Zea mays B73 | 6 | 6 | CH_zma_147 | 4 | 5 | 0.0000000299653 |
| Zea mays B73 | 1 | 6 | CH_zma_319 | 3 | 4 | 0.0000407668 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |