Functional clusters
Information
- Type InterPro
- Description Replication factor-A protein 1, N-terminal
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Digitaria exilis | Dexi_CM05836_chr03B | 5 | CH_dex_189 | 5 | 6 | 0.000000000000112382 |
| Digitaria exilis | Dexi_CM05836_chr03A | 5 | CH_dex_330 | 4 | 5 | 0.000000000560415 |
| Eragrostis curvula | 7 | 5 | CH_ecu_26 | 13 | 20 | 3.69203e-38 |
| Miscanthus sinensis | Chr16 | 5 | CH_msi_484 | 3 | 4 | 0.00000136838 |
| Oropetium thomaeum | Chromosome_5 | 5 | CH_oth_418 | 2 | 2 | 0.000711845 |
| Setaria italica | scaffold_6 | 5 | CH_sit_447 | 3 | 5 | 0.00000282929 |
| Saccharum spontaneum | Chr6C | 5 | CH_ssp_1921 | 3 | 17 | 0.000561421 |
| Saccharum spontaneum | Chr7C | 5 | CH_ssp_838 | 3 | 4 | 0.00000330914 |
| Digitaria exilis | Dexi_CM05836_chr03B | 6 | CH_dex_189 | 5 | 6 | 0.000000000000112382 |
| Digitaria exilis | Dexi_CM05836_chr03A | 6 | CH_dex_330 | 4 | 5 | 0.000000000560415 |
| Eragrostis curvula | 7 | 6 | CH_ecu_26 | 13 | 20 | 3.69203e-38 |
| Miscanthus sinensis | Chr16 | 6 | CH_msi_484 | 3 | 4 | 0.00000136838 |
| Oropetium thomaeum | Chromosome_5 | 6 | CH_oth_418 | 2 | 2 | 0.000711845 |
| Setaria italica | scaffold_6 | 6 | CH_sit_447 | 3 | 5 | 0.00000282929 |
| Saccharum spontaneum | Chr6C | 6 | CH_ssp_1921 | 3 | 17 | 0.000561421 |
| Saccharum spontaneum | Chr7C | 6 | CH_ssp_838 | 3 | 4 | 0.00000330914 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |