Functional clusters
Information
- Type InterPro
- Description Domain of unknown function DUF642
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Asparagus officinalis | AsparagusV1_03 | 5 | CH_aof_409 | 2 | 2 | 0.000755915 |
| Aegilops tauschii | 2D | 5 | CH_ata_84 | 5 | 8 | 0.00000000000195502 |
| Amborella trichopoda | AmTr_v1.0_scaffold00141 | 5 | CH_atr_173 | 4 | 13 | 0.0000000161174 |
| Brachypodium distachyon | Bd5 | 5 | CH_bdi_95 | 4 | 4 | 0.0000000000886545 |
| Cenchrus purpureus | GWHAORA00000005 | 5 | CH_cpu_132 | 6 | 6 | 4.74053e-17 |
| Cenchrus purpureus | GWHAORA00000014 | 5 | CH_cpu_133 | 6 | 6 | 4.74053e-17 |
| Digitaria exilis | Dexi_CM05836_chr07B | 5 | CH_dex_117 | 6 | 8 | 1.31443e-16 |
| Hordeum vulgare | chr2H | 5 | CH_hvu_77 | 6 | 11 | 0.00000000000000196279 |
| Lolium perenne | Lp_chr2_0 | 5 | CH_lpe_325 | 3 | 6 | 0.00000130154 |
| Miscanthus sinensis | Chr11 | 5 | CH_msi_216 | 4 | 4 | 0.000000000388193 |
| Miscanthus sinensis | Chr12 | 5 | CH_msi_64 | 6 | 6 | 2.11318e-17 |
| Oryza alta | GWHAZTO00000004 | 5 | CH_oal_132 | 5 | 5 | 0.0000000000000325702 |
| Oryza alta | GWHAZTO00000016 | 5 | CH_oal_95 | 6 | 8 | 1.56167e-16 |
| Oryza brachyantha | 4 | 5 | CH_obr_105 | 4 | 6 | 0.000000000223784 |
| Oryza sativa ssp. indica | Chr4 | 5 | CH_osaindica_144 | 4 | 4 | 0.000000000136507 |
| Oryza sativa Kitaake | Chr4 | 5 | CH_osak_115 | 5 | 5 | 0.0000000000000596283 |
| Oryza sativa ssp. japonica | chr04 | 5 | CH_osa_82 | 5 | 6 | 0.0000000000000462162 |
| Oropetium thomaeum | Chromosome_6 | 5 | CH_oth_17 | 6 | 8 | 0.00000000000000576179 |
| Oropetium thomaeum | Chromosome_7 | 5 | CH_oth_18 | 6 | 8 | 0.00000000000000576179 |
| Phyllostachys edulis | hic_scaffold_23 | 5 | CH_ped_424 | 3 | 3 | 0.00000241316 |
| Panicum hallii | Chr07 | 5 | CH_pha_15 | 8 | 9 | 3.1417e-24 |
| Physcomitrium patens | Chr12 | 5 | CH_ppa_364 | 2 | 2 | 0.000612726 |
| Sorghum bicolor | Chr06 | 5 | CH_sbi_56 | 6 | 6 | 3.28507e-18 |
| Secale cereale | GWHASIY00000002 | 5 | CH_sce_170 | 6 | 29 | 0.0000000000062518 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_1377 | 3 | 3 | 0.00000344948 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_710 | 5 | 13 | 0.000000000630655 |
| Sequoiadendron giganteum | chr8 | 5 | CH_sgi_735 | 4 | 4 | 0.0000000013444 |
| Setaria italica | scaffold_7 | 5 | CH_sit_39 | 7 | 7 | 2.38605e-21 |
| Setaria viridis | Chr_07 | 5 | CH_svi_61 | 6 | 6 | 4.02155e-18 |
| Triticum aestivum | Chr2A | 5 | CH_tae_460 | 5 | 6 | 0.00000000000153307 |
| Triticum aestivum | Chr2B | 5 | CH_tae_488 | 5 | 7 | 0.00000000000536447 |
| Triticum aestivum | Chr2D | 5 | CH_tae_526 | 5 | 8 | 0.0000000000143019 |
| Triticum dicoccoides | 2B | 5 | CH_tdi_306 | 4 | 6 | 0.00000000360088 |
| Triticum dicoccoides | 2A | 5 | CH_tdi_530 | 3 | 3 | 0.00000107861 |
| Triticum turgidum | chr2A | 5 | CH_ttu_219 | 5 | 7 | 0.00000000000638429 |
| Triticum turgidum | chr2B | 5 | CH_ttu_220 | 5 | 7 | 0.00000000000638429 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00056.1 | 5 | CH_zjn_14 | 6 | 9 | 0.00000000000000162032 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00004.1 | 5 | CH_zjn_37 | 5 | 11 | 0.0000000000401195 |
| Zea mays B73 | 2 | 5 | CH_zma_27 | 6 | 6 | 7.26773e-18 |
| Asparagus officinalis | AsparagusV1_03 | 6 | CH_aof_409 | 2 | 2 | 0.000755915 |
| Aegilops tauschii | 2D | 6 | CH_ata_84 | 5 | 8 | 0.00000000000195502 |
| Amborella trichopoda | AmTr_v1.0_scaffold00141 | 6 | CH_atr_173 | 4 | 13 | 0.0000000161174 |
| Brachypodium distachyon | Bd5 | 6 | CH_bdi_95 | 4 | 4 | 0.0000000000886545 |
| Cenchrus purpureus | GWHAORA00000005 | 6 | CH_cpu_132 | 6 | 6 | 4.74053e-17 |
| Cenchrus purpureus | GWHAORA00000014 | 6 | CH_cpu_133 | 6 | 6 | 4.74053e-17 |
| Digitaria exilis | Dexi_CM05836_chr07B | 6 | CH_dex_117 | 6 | 8 | 1.31443e-16 |
| Hordeum vulgare | chr2H | 6 | CH_hvu_77 | 6 | 11 | 0.00000000000000196279 |
| Lolium perenne | Lp_chr2_0 | 6 | CH_lpe_325 | 3 | 6 | 0.00000130154 |
| Miscanthus sinensis | Chr11 | 6 | CH_msi_216 | 4 | 4 | 0.000000000388193 |
| Miscanthus sinensis | Chr12 | 6 | CH_msi_64 | 6 | 6 | 2.11318e-17 |
| Oryza alta | GWHAZTO00000004 | 6 | CH_oal_132 | 5 | 5 | 0.0000000000000325702 |
| Oryza alta | GWHAZTO00000016 | 6 | CH_oal_95 | 6 | 8 | 1.56167e-16 |
| Oryza brachyantha | 4 | 6 | CH_obr_105 | 4 | 6 | 0.000000000223784 |
| Oryza sativa ssp. indica | Chr4 | 6 | CH_osaindica_144 | 4 | 4 | 0.000000000136507 |
| Oryza sativa Kitaake | Chr4 | 6 | CH_osak_115 | 5 | 5 | 0.0000000000000596283 |
| Oryza sativa ssp. japonica | chr04 | 6 | CH_osa_82 | 5 | 6 | 0.0000000000000462162 |
| Oropetium thomaeum | Chromosome_6 | 6 | CH_oth_17 | 6 | 8 | 0.00000000000000576179 |
| Oropetium thomaeum | Chromosome_7 | 6 | CH_oth_18 | 6 | 8 | 0.00000000000000576179 |
| Phyllostachys edulis | hic_scaffold_23 | 6 | CH_ped_424 | 3 | 3 | 0.00000241316 |
| Panicum hallii | Chr07 | 6 | CH_pha_15 | 8 | 9 | 3.1417e-24 |
| Physcomitrium patens | Chr12 | 6 | CH_ppa_364 | 2 | 2 | 0.000612726 |
| Sorghum bicolor | Chr06 | 6 | CH_sbi_56 | 6 | 6 | 3.28507e-18 |
| Secale cereale | GWHASIY00000002 | 6 | CH_sce_170 | 6 | 29 | 0.0000000000062518 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_1377 | 3 | 3 | 0.00000344948 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_710 | 5 | 13 | 0.000000000630655 |
| Sequoiadendron giganteum | chr8 | 6 | CH_sgi_735 | 4 | 4 | 0.0000000013444 |
| Setaria italica | scaffold_7 | 6 | CH_sit_39 | 7 | 7 | 2.38605e-21 |
| Setaria viridis | Chr_07 | 6 | CH_svi_61 | 6 | 6 | 4.02155e-18 |
| Triticum aestivum | Chr2A | 6 | CH_tae_460 | 5 | 6 | 0.00000000000153307 |
| Triticum aestivum | Chr2B | 6 | CH_tae_488 | 5 | 7 | 0.00000000000536447 |
| Triticum aestivum | Chr2D | 6 | CH_tae_526 | 5 | 8 | 0.0000000000143019 |
| Triticum dicoccoides | 2B | 6 | CH_tdi_306 | 4 | 6 | 0.00000000360088 |
| Triticum dicoccoides | 2A | 6 | CH_tdi_530 | 3 | 3 | 0.00000107861 |
| Triticum turgidum | chr2A | 6 | CH_ttu_219 | 5 | 7 | 0.00000000000638429 |
| Triticum turgidum | chr2B | 6 | CH_ttu_220 | 5 | 7 | 0.00000000000638429 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00056.1 | 6 | CH_zjn_14 | 6 | 9 | 0.00000000000000162032 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00004.1 | 6 | CH_zjn_37 | 5 | 11 | 0.0000000000401195 |
| Zea mays B73 | 2 | 6 | CH_zma_27 | 6 | 6 | 7.26773e-18 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |