Functional clusters

Information

  • Type InterPro
  • Description Domain unknown function DUF295

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Ananas comosus LG15 5 CH_aco_112 3 5 0.000017019
Asparagus officinalis AsparagusV1_06 5 CH_aof_212 5 35 0.0000934348
Asparagus officinalis AsparagusV1_07 5 CH_aof_213 4 12 0.0000946073
Allium sativum chr4 5 CH_asa_1214 3 5 0.000239876
Allium sativum chr5 5 CH_asa_227 5 7 0.000000000265934
Aegilops tauschii 3D 5 CH_ata_101 9 28 0.0000000000233872
Aegilops tauschii 1D 5 CH_ata_232 5 6 0.000000145815
Aegilops tauschii 2D 5 CH_ata_433 4 5 0.0000342741
Aegilops tauschii 7D 5 CH_ata_471 6 31 0.0000585898
Aegilops tauschii 7D 5 CH_ata_571 5 19 0.000271915
Aegilops tauschii 2D 5 CH_ata_634 4 8 0.000475731
Arabidopsis thaliana Chr1 5 CH_ath_338 4 11 0.0000129253
Arabidopsis thaliana Chr4 5 CH_ath_483 3 4 0.000186132
Brachypodium distachyon Bd2 5 CH_bdi_332 5 15 0.0000215942
Brachypodium distachyon Bd2 5 CH_bdi_624 3 3 0.000867631
Brachypodium distachyon Bd4 5 CH_bdi_96 9 39 0.0000000000917892
Calamus simplicifolius scaffold222 5 CH_calsi_231 4 8 0.00000259166
Calamus simplicifolius scaffold685 5 CH_calsi_309 3 3 0.0000368842
Calamus simplicifolius scaffold318 5 CH_calsi_410 3 4 0.000147421
Cenchrus purpureus GWHAORA00000009 5 CH_cpu_1184 4 7 0.0000459634
Cenchrus purpureus GWHAORA00000009 5 CH_cpu_742 6 22 0.000000413738
Cenchrus purpureus GWHAORA00000001 5 CH_cpu_923 5 13 0.00000349575
Digitaria exilis Dexi_CM05836_chr07A 5 CH_dex_1375 3 3 0.000435821
Digitaria exilis Dexi_CM05836_chr08A 5 CH_dex_1376 3 4 0.000435821
Eragrostis curvula 1 5 CH_ecu_1028 4 4 0.0000282339
Eragrostis curvula 3 5 CH_ecu_1220 4 5 0.000140626
Eragrostis curvula 4 5 CH_ecu_1237 5 13 0.000168525
Eragrostis curvula 1 5 CH_ecu_131 12 17 4.21883e-20
Eragrostis curvula 2 5 CH_ecu_1444 7 57 0.00065766
Eragrostis curvula 2 5 CH_ecu_1476 5 17 0.000797428
Eragrostis curvula 2 5 CH_ecu_486 11 68 0.00000000179674
Eragrostis curvula 3 5 CH_ecu_515 6 7 0.00000000449537
Eragrostis curvula Contig50 5 CH_ecu_567 6 8 0.0000000179079
Eragrostis curvula Contig596 5 CH_ecu_589 7 16 0.0000000337512
Eragrostis curvula Contig50 5 CH_ecu_622 6 9 0.0000000535041
Eragrostis curvula Contig229 5 CH_ecu_626 7 17 0.0000000571386
Eragrostis curvula 4 5 CH_ecu_855 5 7 0.00000281663
Eragrostis curvula Contig30 5 CH_ecu_856 5 7 0.00000281663
Eragrostis curvula Contig44 5 CH_ecu_88 18 53 3.60077e-24
Eragrostis curvula 2 5 CH_ecu_890 7 29 0.00000436208
Eragrostis curvula 2 5 CH_ecu_946 7 32 0.00000929017
Hordeum vulgare chr1H 5 CH_hvu_453 4 6 0.0000112882
Hordeum vulgare chr1H 5 CH_hvu_672 4 11 0.000246407
Hordeum vulgare chr5H 5 CH_hvu_708 3 3 0.00038751
Lolium perenne Lp_chr4_0 5 CH_lpe_133 7 11 0.000000000197016
Lolium perenne Lp_chr3_0 5 CH_lpe_193 10 69 0.00000000811543
Lolium perenne Lp_chr7_0.1 5 CH_lpe_664 4 7 0.000420754
Musa acuminata chr09 5 CH_mac_110 7 58 0.0000000245001
Magnolia biondii Chr19 5 CH_mbi_135 9 77 0.000000000000307521
Magnolia biondii Chr18 5 CH_mbi_651 4 14 0.0000113339
Magnolia biondii Chr15 5 CH_mbi_956 3 5 0.00021147
Miscanthus sinensis Chr10 5 CH_msi_485 6 33 0.0000014171
Miscanthus sinensis Chr05 5 CH_msi_610 6 48 0.0000153756
Miscanthus sinensis Chr19 5 CH_msi_918 3 3 0.000300024
Miscanthus sinensis Chr09 5 CH_msi_919 3 3 0.000300024
Oryza alta GWHAZTO00000010 5 CH_oal_1255 4 9 0.000141922
Oryza alta GWHAZTO00000003 5 CH_oal_1511 4 11 0.000370615
Oryza alta GWHAZTO00000002 5 CH_oal_1666 3 3 0.000622146
Oryza alta GWHAZTO00000022 5 CH_oal_1667 3 3 0.000622146
Oryza alta GWHAZTO00000011 5 CH_oal_197 8 23 0.00000000000568432
Oryza alta GWHAZTO00000023 5 CH_oal_311 8 42 0.00000000132772
Oryza alta GWHAZTO00000017 5 CH_oal_321 5 5 0.00000000205785
Oryza alta GWHAZTO00000011 5 CH_oal_558 8 77 0.00000022391
Oryza alta GWHAZTO00000005 5 CH_oal_669 4 4 0.00000113463
Oryza brachyantha 5 5 CH_obr_279 5 17 0.00000518415
Oryza brachyantha 6 5 CH_obr_611 3 4 0.000978275
Oryza brachyantha 5 5 CH_obr_64 6 6 0.00000000000155515
Oryza sativa ssp. indica Chr11 5 CH_osaindica_124 8 24 0.0000000000142018
Oryza sativa ssp. indica Chr3 5 CH_osaindica_177 6 11 0.00000000205441
Oryza sativa ssp. indica Chr6 5 CH_osaindica_210 5 6 0.0000000125359
Oryza sativa ssp. indica Chr10 5 CH_osaindica_321 4 4 0.000000964603
Oryza sativa Kitaake Chr5 5 CH_osak_254 6 8 0.00000000547909
Oryza sativa Kitaake Chr6 5 CH_osak_402 5 7 0.000000993346
Oryza sativa Kitaake Chr4 5 CH_osak_506 5 10 0.0000117963
Oryza sativa Kitaake Chr1 5 CH_osak_531 5 11 0.0000215514
Oryza sativa Kitaake Chr5 5 CH_osak_57 11 14 7.76125e-20
Oryza sativa Kitaake Chr9 5 CH_osak_577 7 48 0.0000514406
Oryza sativa Kitaake Chr11 5 CH_osak_617 7 50 0.000069283
Oryza sativa Kitaake Chr1 5 CH_osak_713 4 6 0.000170375
Oryza sativa Kitaake Chr11 5 CH_osak_88 10 17 0.00000000000000102228
Oryza sativa ssp. japonica chr10 5 CH_osa_604 3 3 0.000191451
Oryza sativa ssp. japonica chr11 5 CH_osa_74 8 15 0.0000000000000132191
Phyllostachys edulis hic_scaffold_5 5 CH_ped_648 3 3 0.000113959
Phyllostachys edulis hic_scaffold_16 5 CH_ped_649 3 3 0.000113959
Phyllostachys edulis hic_scaffold_7 5 CH_ped_94 10 44 0.00000000000001861
Panicum hallii Chr08 5 CH_pha_151 6 9 0.000000000250938
Panicum hallii Chr04 5 CH_pha_207 5 6 0.00000000884285
Panicum hallii Chr08 5 CH_pha_229 5 7 0.0000000308966
Populus trichocarpa Chr05 5 CH_ptr_211 4 4 0.00000000137887
Sorghum bicolor Chr10 5 CH_sbi_293 8 65 0.000000109631
Sorghum bicolor Chr03 5 CH_sbi_502 5 21 0.0000449546
Sorghum bicolor Chr05 5 CH_sbi_79 9 17 0.00000000000000124345
Secale cereale GWHASIY00000001 5 CH_sce_236 6 6 0.000000000265639
Secale cereale GWHASIY00000003 5 CH_sce_309 6 8 0.00000000738423
Setaria italica scaffold_3 5 CH_sit_276 7 24 0.0000000317201
Setaria italica scaffold_8 5 CH_sit_284 7 25 0.0000000439392
Setaria italica scaffold_5 5 CH_sit_461 4 4 0.00000338713
Solanum lycopersicum SL4.0ch01 5 CH_sly_391 5 42 0.00000115704
Spirodela polyrhiza pseudo30 5 CH_spo_92 3 3 0.0000000155827
Saccharum spontaneum Chr8B 5 CH_ssp_134 7 9 0.0000000000000440506
Saccharum spontaneum Chr5A 5 CH_ssp_1638 3 3 0.000277939
Saccharum spontaneum Chr3A 5 CH_ssp_1639 3 3 0.000277939
Saccharum spontaneum Chr6A 5 CH_ssp_185 8 27 0.00000000000377464
Setaria viridis Chr_07 5 CH_svi_427 4 4 0.00000147677
Setaria viridis Chr_08 5 CH_svi_514 5 16 0.0000153068
Setaria viridis Chr_03 5 CH_svi_638 5 23 0.000116254
Setaria viridis Chr_05 5 CH_svi_837 3 3 0.000602144
Triticum aestivum Chr3A 5 CH_tae_1169 6 10 0.000000216372
Triticum aestivum Chr4A 5 CH_tae_1899 4 4 0.0000493263
Triticum aestivum Chr3B 5 CH_tae_1900 4 4 0.0000493263
Triticum aestivum Chr3B 5 CH_tae_2314 5 13 0.00028386
Triticum aestivum Chr3B 5 CH_tae_2315 6 27 0.000285183
Triticum aestivum Chr1B 5 CH_tae_308 9 10 0.00000000000000100372
Triticum aestivum Chr1D 5 CH_tae_359 8 8 0.0000000000000220345
Triticum aestivum Chr3D 5 CH_tae_485 9 18 0.00000000000472167
Triticum aestivum Chr4A 5 CH_tae_531 10 31 0.0000000000186988
Triticum aestivum Chr1A 5 CH_tae_622 7 9 0.000000000171681
Triticum aestivum Chr7D 5 CH_tae_791 9 33 0.00000000352073
Triticum dicoccoides 3B 5 CH_tdi_1213 3 4 0.000685413
Triticum dicoccoides 1B 5 CH_tdi_182 7 14 0.00000000000325614
Triticum dicoccoides 1A 5 CH_tdi_536 4 5 0.00000114446
Triticum dicoccoides 2A 5 CH_tdi_971 3 3 0.000171528
Triticum turgidum chr3B 5 CH_ttu_1047 7 53 0.000110987
Triticum turgidum chr3A 5 CH_ttu_1088 5 15 0.00016597
Triticum turgidum chr2A 5 CH_ttu_1152 4 6 0.000220434
Triticum turgidum chr3B 5 CH_ttu_1153 4 6 0.000220434
Triticum turgidum chr1A 5 CH_ttu_222 7 8 0.00000000000669887
Triticum turgidum chr1B 5 CH_ttu_342 6 7 0.00000000153097
Triticum turgidum chr4A 5 CH_ttu_413 8 29 0.0000000128047
Triticum turgidum chr4A 5 CH_ttu_836 4 4 0.0000147873
Zea mays B104 scaffold9.309 5 CH_zma-b104_43 3 5 0.000116868
Zea mays B73 2 5 CH_zma_112 5 7 0.00000000279255
Zea mays B73 6 5 CH_zma_134 5 9 0.0000000167209
Zea mays B73 9 5 CH_zma_197 5 15 0.000000396066
Zea mays B73 4 5 CH_zma_533 3 5 0.000865026
Ananas comosus LG15 6 CH_aco_112 3 5 0.000017019
Asparagus officinalis AsparagusV1_06 6 CH_aof_212 5 35 0.0000934348
Asparagus officinalis AsparagusV1_07 6 CH_aof_213 4 12 0.0000946073
Allium sativum chr4 6 CH_asa_1214 3 5 0.000239876
Allium sativum chr5 6 CH_asa_227 5 7 0.000000000265934
Aegilops tauschii 3D 6 CH_ata_101 9 28 0.0000000000233872
Aegilops tauschii 1D 6 CH_ata_232 5 6 0.000000145815
Aegilops tauschii 2D 6 CH_ata_433 4 5 0.0000342741
Aegilops tauschii 7D 6 CH_ata_471 6 31 0.0000585898
Aegilops tauschii 7D 6 CH_ata_571 5 19 0.000271915
Aegilops tauschii 2D 6 CH_ata_634 4 8 0.000475731
Arabidopsis thaliana Chr1 6 CH_ath_338 4 11 0.0000129253
Arabidopsis thaliana Chr4 6 CH_ath_483 3 4 0.000186132
Brachypodium distachyon Bd2 6 CH_bdi_332 5 15 0.0000215942
Brachypodium distachyon Bd2 6 CH_bdi_624 3 3 0.000867631
Brachypodium distachyon Bd4 6 CH_bdi_96 9 39 0.0000000000917892
Calamus simplicifolius scaffold222 6 CH_calsi_231 4 8 0.00000259166
Calamus simplicifolius scaffold685 6 CH_calsi_309 3 3 0.0000368842
Calamus simplicifolius scaffold318 6 CH_calsi_410 3 4 0.000147421
Cenchrus purpureus GWHAORA00000009 6 CH_cpu_1184 4 7 0.0000459634
Cenchrus purpureus GWHAORA00000009 6 CH_cpu_742 6 22 0.000000413738
Cenchrus purpureus GWHAORA00000001 6 CH_cpu_923 5 13 0.00000349575
Digitaria exilis Dexi_CM05836_chr07A 6 CH_dex_1375 3 3 0.000435821
Digitaria exilis Dexi_CM05836_chr08A 6 CH_dex_1376 3 4 0.000435821
Eragrostis curvula 1 6 CH_ecu_1028 4 4 0.0000282339
Eragrostis curvula 3 6 CH_ecu_1220 4 5 0.000140626
Eragrostis curvula 4 6 CH_ecu_1237 5 13 0.000168525
Eragrostis curvula 1 6 CH_ecu_131 12 17 4.21883e-20
Eragrostis curvula 2 6 CH_ecu_1444 7 57 0.00065766
Eragrostis curvula 2 6 CH_ecu_1476 5 17 0.000797428
Eragrostis curvula 2 6 CH_ecu_486 11 68 0.00000000179674
Eragrostis curvula 3 6 CH_ecu_515 6 7 0.00000000449537
Eragrostis curvula Contig50 6 CH_ecu_567 6 8 0.0000000179079
Eragrostis curvula Contig596 6 CH_ecu_589 7 16 0.0000000337512
Eragrostis curvula Contig50 6 CH_ecu_622 6 9 0.0000000535041
Eragrostis curvula Contig229 6 CH_ecu_626 7 17 0.0000000571386
Eragrostis curvula 4 6 CH_ecu_855 5 7 0.00000281663
Eragrostis curvula Contig30 6 CH_ecu_856 5 7 0.00000281663
Eragrostis curvula Contig44 6 CH_ecu_88 18 53 3.60077e-24
Eragrostis curvula 2 6 CH_ecu_890 7 29 0.00000436208
Eragrostis curvula 2 6 CH_ecu_946 7 32 0.00000929017
Hordeum vulgare chr1H 6 CH_hvu_453 4 6 0.0000112882
Hordeum vulgare chr1H 6 CH_hvu_672 4 11 0.000246407
Hordeum vulgare chr5H 6 CH_hvu_708 3 3 0.00038751
Lolium perenne Lp_chr4_0 6 CH_lpe_133 7 11 0.000000000197016
Lolium perenne Lp_chr3_0 6 CH_lpe_193 10 69 0.00000000811543
Lolium perenne Lp_chr7_0.1 6 CH_lpe_664 4 7 0.000420754
Musa acuminata chr09 6 CH_mac_110 7 58 0.0000000245001
Magnolia biondii Chr19 6 CH_mbi_135 9 77 0.000000000000307521
Magnolia biondii Chr18 6 CH_mbi_651 4 14 0.0000113339
Magnolia biondii Chr15 6 CH_mbi_956 3 5 0.00021147
Miscanthus sinensis Chr10 6 CH_msi_485 6 33 0.0000014171
Miscanthus sinensis Chr05 6 CH_msi_610 6 48 0.0000153756
Miscanthus sinensis Chr19 6 CH_msi_918 3 3 0.000300024
Miscanthus sinensis Chr09 6 CH_msi_919 3 3 0.000300024
Oryza alta GWHAZTO00000010 6 CH_oal_1255 4 9 0.000141922
Oryza alta GWHAZTO00000003 6 CH_oal_1511 4 11 0.000370615
Oryza alta GWHAZTO00000002 6 CH_oal_1666 3 3 0.000622146
Oryza alta GWHAZTO00000022 6 CH_oal_1667 3 3 0.000622146
Oryza alta GWHAZTO00000011 6 CH_oal_197 8 23 0.00000000000568432
Oryza alta GWHAZTO00000023 6 CH_oal_311 8 42 0.00000000132772
Oryza alta GWHAZTO00000017 6 CH_oal_321 5 5 0.00000000205785
Oryza alta GWHAZTO00000011 6 CH_oal_558 8 77 0.00000022391
Oryza alta GWHAZTO00000005 6 CH_oal_669 4 4 0.00000113463
Oryza brachyantha 5 6 CH_obr_279 5 17 0.00000518415
Oryza brachyantha 6 6 CH_obr_611 3 4 0.000978275
Oryza brachyantha 5 6 CH_obr_64 6 6 0.00000000000155515
Oryza sativa ssp. indica Chr11 6 CH_osaindica_124 8 24 0.0000000000142018
Oryza sativa ssp. indica Chr3 6 CH_osaindica_177 6 11 0.00000000205441
Oryza sativa ssp. indica Chr6 6 CH_osaindica_210 5 6 0.0000000125359
Oryza sativa ssp. indica Chr10 6 CH_osaindica_321 4 4 0.000000964603
Oryza sativa Kitaake Chr5 6 CH_osak_254 6 8 0.00000000547909
Oryza sativa Kitaake Chr6 6 CH_osak_402 5 7 0.000000993346
Oryza sativa Kitaake Chr4 6 CH_osak_506 5 10 0.0000117963
Oryza sativa Kitaake Chr1 6 CH_osak_531 5 11 0.0000215514
Oryza sativa Kitaake Chr5 6 CH_osak_57 11 14 7.76125e-20
Oryza sativa Kitaake Chr9 6 CH_osak_577 7 48 0.0000514406
Oryza sativa Kitaake Chr11 6 CH_osak_617 7 50 0.000069283
Oryza sativa Kitaake Chr1 6 CH_osak_713 4 6 0.000170375
Oryza sativa Kitaake Chr11 6 CH_osak_88 10 17 0.00000000000000102228
Oryza sativa ssp. japonica chr10 6 CH_osa_604 3 3 0.000191451
Oryza sativa ssp. japonica chr11 6 CH_osa_74 8 15 0.0000000000000132191
Phyllostachys edulis hic_scaffold_5 6 CH_ped_648 3 3 0.000113959
Phyllostachys edulis hic_scaffold_16 6 CH_ped_649 3 3 0.000113959
Phyllostachys edulis hic_scaffold_7 6 CH_ped_94 10 44 0.00000000000001861
Panicum hallii Chr08 6 CH_pha_151 6 9 0.000000000250938
Panicum hallii Chr04 6 CH_pha_207 5 6 0.00000000884285
Panicum hallii Chr08 6 CH_pha_229 5 7 0.0000000308966
Populus trichocarpa Chr05 6 CH_ptr_211 4 4 0.00000000137887
Sorghum bicolor Chr10 6 CH_sbi_293 8 65 0.000000109631
Sorghum bicolor Chr03 6 CH_sbi_502 5 21 0.0000449546
Sorghum bicolor Chr05 6 CH_sbi_79 9 17 0.00000000000000124345
Secale cereale GWHASIY00000001 6 CH_sce_236 6 6 0.000000000265639
Secale cereale GWHASIY00000003 6 CH_sce_309 6 8 0.00000000738423
Setaria italica scaffold_3 6 CH_sit_276 7 24 0.0000000317201
Setaria italica scaffold_8 6 CH_sit_284 7 25 0.0000000439392
Setaria italica scaffold_5 6 CH_sit_461 4 4 0.00000338713
Solanum lycopersicum SL4.0ch01 6 CH_sly_391 5 42 0.00000115704
Spirodela polyrhiza pseudo30 6 CH_spo_92 3 3 0.0000000155827
Saccharum spontaneum Chr8B 6 CH_ssp_134 7 9 0.0000000000000440506
Saccharum spontaneum Chr5A 6 CH_ssp_1638 3 3 0.000277939
Saccharum spontaneum Chr3A 6 CH_ssp_1639 3 3 0.000277939
Saccharum spontaneum Chr6A 6 CH_ssp_185 8 27 0.00000000000377464
Setaria viridis Chr_07 6 CH_svi_427 4 4 0.00000147677
Setaria viridis Chr_08 6 CH_svi_514 5 16 0.0000153068
Setaria viridis Chr_03 6 CH_svi_638 5 23 0.000116254
Setaria viridis Chr_05 6 CH_svi_837 3 3 0.000602144
Triticum aestivum Chr3A 6 CH_tae_1169 6 10 0.000000216372
Triticum aestivum Chr4A 6 CH_tae_1899 4 4 0.0000493263
Triticum aestivum Chr3B 6 CH_tae_1900 4 4 0.0000493263
Triticum aestivum Chr3B 6 CH_tae_2314 5 13 0.00028386
Triticum aestivum Chr3B 6 CH_tae_2315 6 27 0.000285183
Triticum aestivum Chr1B 6 CH_tae_308 9 10 0.00000000000000100372
Triticum aestivum Chr1D 6 CH_tae_359 8 8 0.0000000000000220345
Triticum aestivum Chr3D 6 CH_tae_485 9 18 0.00000000000472167
Triticum aestivum Chr4A 6 CH_tae_531 10 31 0.0000000000186988
Triticum aestivum Chr1A 6 CH_tae_622 7 9 0.000000000171681
Triticum aestivum Chr7D 6 CH_tae_791 9 33 0.00000000352073
Triticum dicoccoides 3B 6 CH_tdi_1213 3 4 0.000685413
Triticum dicoccoides 1B 6 CH_tdi_182 7 14 0.00000000000325614
Triticum dicoccoides 1A 6 CH_tdi_536 4 5 0.00000114446
Triticum dicoccoides 2A 6 CH_tdi_971 3 3 0.000171528
Triticum turgidum chr3B 6 CH_ttu_1047 7 53 0.000110987
Triticum turgidum chr3A 6 CH_ttu_1088 5 15 0.00016597
Triticum turgidum chr2A 6 CH_ttu_1152 4 6 0.000220434
Triticum turgidum chr3B 6 CH_ttu_1153 4 6 0.000220434
Triticum turgidum chr1A 6 CH_ttu_222 7 8 0.00000000000669887
Triticum turgidum chr1B 6 CH_ttu_342 6 7 0.00000000153097
Triticum turgidum chr4A 6 CH_ttu_413 8 29 0.0000000128047
Triticum turgidum chr4A 6 CH_ttu_836 4 4 0.0000147873
Zea mays B104 scaffold9.309 6 CH_zma-b104_43 3 5 0.000116868
Zea mays B73 2 6 CH_zma_112 5 7 0.00000000279255
Zea mays B73 6 6 CH_zma_134 5 9 0.0000000167209
Zea mays B73 9 6 CH_zma_197 5 15 0.000000396066
Zea mays B73 4 6 CH_zma_533 3 5 0.000865026

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001