Functional clusters

Information

  • Type Gene Ontology
  • Description xenobiotic detoxification by transmembrane export across the plasma membrane

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Ananas comosus LG05 3 CH_aco_72 3 3 0.0000511899
Aegilops tauschii 3D 3 CH_ata_201 4 9 0.0000190458
Arabidopsis thaliana Chr1 3 CH_ath_214 4 6 0.00000024344
Arabidopsis thaliana Chr1 3 CH_ath_421 4 17 0.0000383964
Amborella trichopoda AmTr_v1.0_scaffold00059 3 CH_atr_128 4 7 0.000000921814
Brachypodium distachyon Bd5 3 CH_bdi_253 3 4 0.000208353
Calamus simplicifolius scaffold337 3 CH_calsi_141 3 3 0.0000175768
Cenchrus purpureus GWHAORA00000004 3 CH_cpu_211 5 5 0.00000000275434
Cenchrus purpureus GWHAORA00000011 3 CH_cpu_285 5 7 0.0000000576399
Dioscorea dumetorum contig184 3 CH_ddu_170 3 3 0.000140341
Digitaria exilis Dexi_CM05836_chr04A 3 CH_dex_301 4 5 0.00000178039
Digitaria exilis Dexi_CM05836_chr02A 3 CH_dex_302 4 5 0.00000178039
Digitaria exilis Dexi_CM05836_chr09B 3 CH_dex_395 4 8 0.0000248334
Digitaria exilis Dexi_CM05836_chr09A 3 CH_dex_396 4 8 0.0000248334
Elaeis guineensis EG5.1_Chr16 3 CH_egu_177 3 3 0.000104601
Glycine max Gm19 3 CH_gma_304 4 8 0.0000242628
Glycine max Gm18 3 CH_gma_410 3 3 0.000221156
Glycine max Gm02 3 CH_gma_411 3 3 0.000221156
Glycine max Gm07 3 CH_gma_412 3 3 0.000221156
Glycine max Gm20 3 CH_gma_413 3 3 0.000221156
Lolium perenne Lp_chr2_0 3 CH_lpe_209 4 9 0.0000056926
Miscanthus sinensis Chr02 3 CH_msi_226 4 7 0.00000182517
Oryza alta GWHAZTO00000022 3 CH_oal_806 3 7 0.000929442
Oryza brachyantha 3 3 CH_obr_62 5 13 0.0000000207711
Oryza sativa ssp. indica Chr3 3 CH_osaindica_225 4 14 0.0000271544
Oryza sativa ssp. indica Chr10 3 CH_osaindica_294 3 4 0.00012434
Oryza sativa Kitaake Chr10 3 CH_osak_188 4 5 0.000000436093
Oryza sativa Kitaake Chr3 3 CH_osak_210 4 6 0.00000130701
Oryza sativa ssp. japonica chr10 3 CH_osa_167 4 6 0.0000008167
Oryza sativa ssp. japonica chr03 3 CH_osa_235 4 11 0.000011395
Oryza sativa ssp. japonica chr06 3 CH_osa_353 3 5 0.000206361
Oropetium thomaeum Chromosome_4 3 CH_oth_170 3 4 0.000256243
Oropetium thomaeum Chromosome_1 3 CH_oth_47 4 4 0.0000000798856
Phyllostachys edulis hic_scaffold_13 3 CH_ped_321 3 3 0.0000690328
Phyllostachys edulis hic_scaffold_15 3 CH_ped_322 3 3 0.0000690328
Panicum hallii Chr09 3 CH_pha_81 5 6 0.00000000120424
Populus trichocarpa Chr13 3 CH_ptr_254 4 5 0.00000106265
Populus trichocarpa Chr10 3 CH_ptr_365 3 3 0.000138917
Populus trichocarpa Chr11 3 CH_ptr_64 7 7 6.8131e-16
Sorghum bicolor Chr01 3 CH_sbi_186 4 6 0.00000161758
Sorghum bicolor Chr04 3 CH_sbi_374 3 4 0.000334544
Secale cereale GWHASIY00000006 3 CH_sce_290 4 5 0.00000137388
Secale cereale GWHASIY00000005 3 CH_sce_587 3 3 0.000177718
Sequoiadendron giganteum chr6 3 CH_sgi_1308 3 5 0.000712754
Setaria italica scaffold_9 3 CH_sit_194 4 5 0.000001243
Solanum lycopersicum SL4.0ch05 3 CH_sly_442 3 3 0.000205212
Solanum lycopersicum SL4.0ch05 3 CH_sly_443 3 3 0.000205212
Solanum lycopersicum SL4.0ch04 3 CH_sly_444 3 3 0.000205212
Solanum lycopersicum SL4.0ch03 3 CH_sly_46 7 7 0.00000000000000178215
Solanum lycopersicum SL4.0ch02 3 CH_sly_543 3 4 0.00081974
Saccharum spontaneum Chr1B 3 CH_ssp_281 5 11 0.000000481463
Saccharum spontaneum Chr1C 3 CH_ssp_295 4 4 0.000000642866
Setaria viridis Chr_09 3 CH_svi_244 4 7 0.00000546081
Setaria viridis Chr_09 3 CH_svi_429 3 4 0.000452352
Triticum aestivum Chr3A 3 CH_tae_1099 4 9 0.000146483
Triticum aestivum Chr5D 3 CH_tae_1355 3 3 0.000648675
Triticum aestivum Chr3B 3 CH_tae_260 7 13 0.0000000000113514
Triticum aestivum Chr5A 3 CH_tae_695 4 4 0.000001171
Triticum aestivum Chr3D 3 CH_tae_973 4 7 0.0000408076
Triticum dicoccoides 3A 3 CH_tdi_351 4 8 0.0000197546
Triticum turgidum chr3A 3 CH_ttu_397 4 7 0.00000947095
Vanilla planifolia CM028150.1 3 CH_vpl_163 3 3 0.0000239542
Zoysia japonica ssp. nagirizaki Zjn_sc00019.1 3 CH_zjn_167 3 4 0.000116549
Zea mays B73 1 3 CH_zma_256 3 4 0.000254141
Zea mays B73 5 3 CH_zma_257 3 4 0.000254141
Zostera marina Chr01 3 CH_zosmarina_113 3 4 0.000183095
Ananas comosus LG05 4 CH_aco_72 3 3 0.0000511899
Aegilops tauschii 3D 4 CH_ata_201 4 9 0.0000190458
Arabidopsis thaliana Chr1 4 CH_ath_214 4 6 0.00000024344
Arabidopsis thaliana Chr1 4 CH_ath_421 4 17 0.0000383964
Amborella trichopoda AmTr_v1.0_scaffold00059 4 CH_atr_128 4 7 0.000000921814
Brachypodium distachyon Bd5 4 CH_bdi_253 3 4 0.000208353
Calamus simplicifolius scaffold337 4 CH_calsi_141 3 3 0.0000175768
Cenchrus purpureus GWHAORA00000004 4 CH_cpu_211 5 5 0.00000000275434
Cenchrus purpureus GWHAORA00000011 4 CH_cpu_285 5 7 0.0000000576399
Dioscorea dumetorum contig184 4 CH_ddu_170 3 3 0.000140341
Digitaria exilis Dexi_CM05836_chr04A 4 CH_dex_301 4 5 0.00000178039
Digitaria exilis Dexi_CM05836_chr02A 4 CH_dex_302 4 5 0.00000178039
Digitaria exilis Dexi_CM05836_chr09B 4 CH_dex_395 4 8 0.0000248334
Digitaria exilis Dexi_CM05836_chr09A 4 CH_dex_396 4 8 0.0000248334
Elaeis guineensis EG5.1_Chr16 4 CH_egu_177 3 3 0.000104601
Glycine max Gm19 4 CH_gma_304 4 8 0.0000242628
Glycine max Gm18 4 CH_gma_410 3 3 0.000221156
Glycine max Gm02 4 CH_gma_411 3 3 0.000221156
Glycine max Gm07 4 CH_gma_412 3 3 0.000221156
Glycine max Gm20 4 CH_gma_413 3 3 0.000221156
Lolium perenne Lp_chr2_0 4 CH_lpe_209 4 9 0.0000056926
Miscanthus sinensis Chr02 4 CH_msi_226 4 7 0.00000182517
Oryza alta GWHAZTO00000022 4 CH_oal_806 3 7 0.000929442
Oryza brachyantha 3 4 CH_obr_62 5 13 0.0000000207711
Oryza sativa ssp. indica Chr3 4 CH_osaindica_225 4 14 0.0000271544
Oryza sativa ssp. indica Chr10 4 CH_osaindica_294 3 4 0.00012434
Oryza sativa Kitaake Chr10 4 CH_osak_188 4 5 0.000000436093
Oryza sativa Kitaake Chr3 4 CH_osak_210 4 6 0.00000130701
Oryza sativa ssp. japonica chr10 4 CH_osa_167 4 6 0.0000008167
Oryza sativa ssp. japonica chr03 4 CH_osa_235 4 11 0.000011395
Oryza sativa ssp. japonica chr06 4 CH_osa_353 3 5 0.000206361
Oropetium thomaeum Chromosome_4 4 CH_oth_170 3 4 0.000256243
Oropetium thomaeum Chromosome_1 4 CH_oth_47 4 4 0.0000000798856
Phyllostachys edulis hic_scaffold_13 4 CH_ped_321 3 3 0.0000690328
Phyllostachys edulis hic_scaffold_15 4 CH_ped_322 3 3 0.0000690328
Panicum hallii Chr09 4 CH_pha_81 5 6 0.00000000120424
Populus trichocarpa Chr13 4 CH_ptr_254 4 5 0.00000106265
Populus trichocarpa Chr10 4 CH_ptr_365 3 3 0.000138917
Populus trichocarpa Chr11 4 CH_ptr_64 7 7 6.8131e-16
Sorghum bicolor Chr01 4 CH_sbi_186 4 6 0.00000161758
Sorghum bicolor Chr04 4 CH_sbi_374 3 4 0.000334544
Secale cereale GWHASIY00000006 4 CH_sce_290 4 5 0.00000137388
Secale cereale GWHASIY00000005 4 CH_sce_587 3 3 0.000177718
Sequoiadendron giganteum chr6 4 CH_sgi_1308 3 5 0.000712754
Setaria italica scaffold_9 4 CH_sit_194 4 5 0.000001243
Solanum lycopersicum SL4.0ch05 4 CH_sly_442 3 3 0.000205212
Solanum lycopersicum SL4.0ch05 4 CH_sly_443 3 3 0.000205212
Solanum lycopersicum SL4.0ch04 4 CH_sly_444 3 3 0.000205212
Solanum lycopersicum SL4.0ch03 4 CH_sly_46 7 7 0.00000000000000178215
Solanum lycopersicum SL4.0ch02 4 CH_sly_543 3 4 0.00081974
Saccharum spontaneum Chr1B 4 CH_ssp_281 5 11 0.000000481463
Saccharum spontaneum Chr1C 4 CH_ssp_295 4 4 0.000000642866
Setaria viridis Chr_09 4 CH_svi_244 4 7 0.00000546081
Setaria viridis Chr_09 4 CH_svi_429 3 4 0.000452352
Triticum aestivum Chr3A 4 CH_tae_1099 4 9 0.000146483
Triticum aestivum Chr5D 4 CH_tae_1355 3 3 0.000648675
Triticum aestivum Chr3B 4 CH_tae_260 7 13 0.0000000000113514
Triticum aestivum Chr5A 4 CH_tae_695 4 4 0.000001171
Triticum aestivum Chr3D 4 CH_tae_973 4 7 0.0000408076
Triticum dicoccoides 3A 4 CH_tdi_351 4 8 0.0000197546
Triticum turgidum chr3A 4 CH_ttu_397 4 7 0.00000947095
Vanilla planifolia CM028150.1 4 CH_vpl_163 3 3 0.0000239542
Zoysia japonica ssp. nagirizaki Zjn_sc00019.1 4 CH_zjn_167 3 4 0.000116549
Zea mays B73 1 4 CH_zma_256 3 4 0.000254141
Zea mays B73 5 4 CH_zma_257 3 4 0.000254141
Zostera marina Chr01 4 CH_zosmarina_113 3 4 0.000183095

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001