Functional clusters
Information
- Type Gene Ontology
- Description stomatal closure
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brachypodium distachyon | Bd1 | 3 | CH_bdi_263 | 3 | 3 | 0.000354797 |
| Digitaria exilis | Dexi_CM05836_chr04A | 3 | CH_dex_644 | 4 | 11 | 0.000527771 |
| Eragrostis curvula | 4 | 3 | CH_ecu_771 | 3 | 3 | 0.000398799 |
| Glycine max | Gm03 | 3 | CH_gma_512 | 4 | 10 | 0.000477933 |
| Hordeum vulgare | chr2H | 3 | CH_hvu_347 | 3 | 3 | 0.000187953 |
| Miscanthus sinensis | Chr04 | 3 | CH_msi_518 | 3 | 3 | 0.000506209 |
| Oryza alta | GWHAZTO00000016 | 3 | CH_oal_608 | 3 | 3 | 0.00027263 |
| Oryza brachyantha | 7 | 3 | CH_obr_264 | 3 | 3 | 0.000332892 |
| Oryza sativa Kitaake | Chr7 | 3 | CH_osak_405 | 3 | 3 | 0.000347627 |
| Oryza sativa ssp. japonica | chr07 | 3 | CH_osa_363 | 3 | 3 | 0.000249523 |
| Phyllostachys edulis | hic_scaffold_19 | 3 | CH_ped_484 | 3 | 3 | 0.000699393 |
| Panicum hallii | Chr02 | 3 | CH_pha_367 | 3 | 3 | 0.000356101 |
| Secale cereale | GWHASIY00000003 | 3 | CH_sce_434 | 4 | 6 | 0.0000272372 |
| Secale cereale | GWHASIY00000002 | 3 | CH_sce_769 | 3 | 3 | 0.000728025 |
| Sequoiadendron giganteum | chr8 | 3 | CH_sgi_82 | 15 | 58 | 6.27402e-24 |
| Setaria italica | scaffold_2 | 3 | CH_sit_406 | 3 | 3 | 0.000384465 |
| Selaginella moellendorffii | scaffold_0 | 3 | CH_smo_198 | 3 | 3 | 0.000994902 |
| Setaria viridis | Chr_02 | 3 | CH_svi_397 | 3 | 3 | 0.000298744 |
| Triticum aestivum | Chr2B | 3 | CH_tae_1394 | 3 | 3 | 0.000753679 |
| Triticum aestivum | Chr2A | 3 | CH_tae_1395 | 3 | 3 | 0.000753679 |
| Triticum aestivum | Chr2D | 3 | CH_tae_1396 | 3 | 3 | 0.000753679 |
| Triticum turgidum | chr2A | 3 | CH_ttu_667 | 3 | 3 | 0.000600785 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00001.1 | 3 | CH_zjn_229 | 3 | 4 | 0.000411495 |
| Zea mays B104 | scaffold7.2687 | 3 | CH_zma-b104_31 | 3 | 4 | 0.000202625 |
| Zea mays B73 | 7 | 3 | CH_zma_295 | 3 | 3 | 0.000430353 |
| Brachypodium distachyon | Bd1 | 4 | CH_bdi_263 | 3 | 3 | 0.000354797 |
| Digitaria exilis | Dexi_CM05836_chr04A | 4 | CH_dex_644 | 4 | 11 | 0.000527771 |
| Eragrostis curvula | 4 | 4 | CH_ecu_771 | 3 | 3 | 0.000398799 |
| Glycine max | Gm03 | 4 | CH_gma_512 | 4 | 10 | 0.000477933 |
| Hordeum vulgare | chr2H | 4 | CH_hvu_347 | 3 | 3 | 0.000187953 |
| Miscanthus sinensis | Chr04 | 4 | CH_msi_518 | 3 | 3 | 0.000506209 |
| Oryza alta | GWHAZTO00000016 | 4 | CH_oal_608 | 3 | 3 | 0.00027263 |
| Oryza brachyantha | 7 | 4 | CH_obr_264 | 3 | 3 | 0.000332892 |
| Oryza sativa Kitaake | Chr7 | 4 | CH_osak_405 | 3 | 3 | 0.000347627 |
| Oryza sativa ssp. japonica | chr07 | 4 | CH_osa_363 | 3 | 3 | 0.000249523 |
| Phyllostachys edulis | hic_scaffold_19 | 4 | CH_ped_484 | 3 | 3 | 0.000699393 |
| Panicum hallii | Chr02 | 4 | CH_pha_367 | 3 | 3 | 0.000356101 |
| Secale cereale | GWHASIY00000003 | 4 | CH_sce_434 | 4 | 6 | 0.0000272372 |
| Secale cereale | GWHASIY00000002 | 4 | CH_sce_769 | 3 | 3 | 0.000728025 |
| Sequoiadendron giganteum | chr8 | 4 | CH_sgi_82 | 15 | 58 | 6.27402e-24 |
| Setaria italica | scaffold_2 | 4 | CH_sit_406 | 3 | 3 | 0.000384465 |
| Selaginella moellendorffii | scaffold_0 | 4 | CH_smo_198 | 3 | 3 | 0.000994902 |
| Setaria viridis | Chr_02 | 4 | CH_svi_397 | 3 | 3 | 0.000298744 |
| Triticum aestivum | Chr2B | 4 | CH_tae_1394 | 3 | 3 | 0.000753679 |
| Triticum aestivum | Chr2A | 4 | CH_tae_1395 | 3 | 3 | 0.000753679 |
| Triticum aestivum | Chr2D | 4 | CH_tae_1396 | 3 | 3 | 0.000753679 |
| Triticum turgidum | chr2A | 4 | CH_ttu_667 | 3 | 3 | 0.000600785 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00001.1 | 4 | CH_zjn_229 | 3 | 4 | 0.000411495 |
| Zea mays B104 | scaffold7.2687 | 4 | CH_zma-b104_31 | 3 | 4 | 0.000202625 |
| Zea mays B73 | 7 | 4 | CH_zma_295 | 3 | 3 | 0.000430353 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |