Functional clusters

Information

  • Type Gene Ontology
  • Description D-serine biosynthetic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cenchrus purpureus GWHAORA00000008 3 CH_cpu_181 6 42 0.000000000246616
Cenchrus purpureus GWHAORA00000003 3 CH_cpu_192 4 4 0.000000000648356
Cenchrus purpureus GWHAORA00000009 3 CH_cpu_400 4 18 0.00000197737
Cenchrus purpureus GWHAORA00000001 3 CH_cpu_403 3 3 0.00000220762
Glycine max Gm05 3 CH_gma_320 2 2 0.0000379557
Magnolia biondii Chr19 3 CH_mbi_423 2 2 0.0000485661
Oryza alta GWHAZTO00000011 3 CH_oal_618 2 2 0.00030227
Oryza alta GWHAZTO00000012 3 CH_oal_784 2 3 0.000906777
Oryza sativa ssp. japonica chr11 3 CH_osa_425 2 2 0.000528123
Phyllostachys edulis hic_scaffold_11 3 CH_ped_413 2 3 0.000366698
Sorghum bicolor Chr05 3 CH_sbi_406 2 3 0.000527988
Setaria italica scaffold_8 3 CH_sit_11 9 12 2.87376e-26
Setaria italica scaffold_7 3 CH_sit_197 3 3 0.00000144536
Setaria viridis Chr_07 3 CH_svi_147 3 3 0.0000000816799
Setaria viridis Chr_08 3 CH_svi_474 2 2 0.000782677
Triticum aestivum Chr5A 3 CH_tae_1208 2 2 0.000280599
Triticum turgidum chr5A 3 CH_ttu_537 2 2 0.000187521
Cenchrus purpureus GWHAORA00000008 4 CH_cpu_181 6 42 0.000000000246616
Cenchrus purpureus GWHAORA00000003 4 CH_cpu_192 4 4 0.000000000648356
Cenchrus purpureus GWHAORA00000009 4 CH_cpu_400 4 18 0.00000197737
Cenchrus purpureus GWHAORA00000001 4 CH_cpu_403 3 3 0.00000220762
Glycine max Gm05 4 CH_gma_320 2 2 0.0000379557
Magnolia biondii Chr19 4 CH_mbi_423 2 2 0.0000485661
Oryza alta GWHAZTO00000011 4 CH_oal_618 2 2 0.00030227
Oryza alta GWHAZTO00000012 4 CH_oal_784 2 3 0.000906777
Oryza sativa ssp. japonica chr11 4 CH_osa_425 2 2 0.000528123
Phyllostachys edulis hic_scaffold_11 4 CH_ped_413 2 3 0.000366698
Sorghum bicolor Chr05 4 CH_sbi_406 2 3 0.000527988
Setaria italica scaffold_8 4 CH_sit_11 9 12 2.87376e-26
Setaria italica scaffold_7 4 CH_sit_197 3 3 0.00000144536
Setaria viridis Chr_07 4 CH_svi_147 3 3 0.0000000816799
Setaria viridis Chr_08 4 CH_svi_474 2 2 0.000782677
Triticum aestivum Chr5A 4 CH_tae_1208 2 2 0.000280599
Triticum turgidum chr5A 4 CH_ttu_537 2 2 0.000187521

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001