Functional clusters

Information

  • Type Gene Ontology
  • Description intracellular organelle lumen

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Eragrostis curvula 3 3 CH_ecu_796 10 59 0.00053929
Eragrostis curvula 3 4 CH_ecu_796 10 59 0.00053929

Available child term results

Ontology identifier Description Number of clusters
GO:0000118 histone deacetylase complex 2
GO:0000124 SAGA complex 2
GO:0000795 synaptonemal complex 2
GO:0000802 transverse filament 4
GO:0000811 GINS complex 2
GO:0005652 nuclear lamina 2
GO:0005654 nucleoplasm 2
GO:0005655 nucleolar ribonuclease P complex 10
GO:0005662 DNA replication factor A complex 2
GO:0005664 nuclear origin of replication recognition complex 6
GO:0005665 RNA polymerase II, core complex 6
GO:0005669 transcription factor TFIID complex 4
GO:0005672 transcription factor TFIIA complex 8
GO:0005673 transcription factor TFIIE complex 8
GO:0005674 transcription factor TFIIF complex 14
GO:0005712 chiasma 2
GO:0005730 nucleolus 12
GO:0005736 RNA polymerase I complex 2
GO:0005758 mitochondrial intermembrane space 24
GO:0005759 mitochondrial matrix 32
GO:0005762 mitochondrial large ribosomal subunit 2
GO:0005763 mitochondrial small ribosomal subunit 6
GO:0005775 vacuolar lumen 4
GO:0005782 peroxisomal matrix 4
GO:0008622 epsilon DNA polymerase complex 30
GO:0015030 Cajal body 4
GO:0016363 nuclear matrix 4
GO:0016591 RNA polymerase II, holoenzyme 2
GO:0016593 Cdc73/Paf1 complex 4
GO:0016604 nuclear body 2
GO:0016607 nuclear speck 4
GO:0030875 rDNA protrusion 2
GO:0030896 checkpoint clamp complex 2
GO:0031011 Ino80 complex 2
GO:0032777 Piccolo NuA4 histone acetyltransferase complex 10
GO:0032783 super elongation complex 8
GO:0034457 Mpp10 complex 12
GO:0035061 interchromatin granule 2
GO:0035101 FACT complex 26
GO:0035267 NuA4 histone acetyltransferase complex 6
GO:0043625 delta DNA polymerase complex 4
GO:0048188 Set1C/COMPASS complex 8
GO:0070449 elongin complex 4
GO:0070461 SAGA-type complex 4
GO:0070545 PeBoW complex 2
GO:0099086 synaptonemal structure 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001