Functional clusters
Information
- Type Gene Ontology
- Description mitochondrial matrix
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr2 | 3 | CH_asa_279 | 4 | 5 | 0.000000897255 |
| Allium sativum | chr1 | 3 | CH_asa_349 | 4 | 7 | 0.0000062673 |
| Allium sativum | chr8 | 3 | CH_asa_740 | 3 | 4 | 0.000536882 |
| Aegilops tauschii | 3D | 3 | CH_ata_24 | 7 | 8 | 0.0000000000000013835 |
| Hordeum vulgare | chr3H | 3 | CH_hvu_169 | 4 | 6 | 0.000000247127 |
| Oryza alta | GWHAZTO00000006 | 3 | CH_oal_552 | 3 | 4 | 0.000127592 |
| Oryza alta | GWHAZTO00000013 | 3 | CH_oal_639 | 3 | 5 | 0.000318818 |
| Oryza sativa Kitaake | Chr1 | 3 | CH_osak_274 | 3 | 3 | 0.00004009 |
| Secale cereale | GWHASIY00000003 | 3 | CH_sce_443 | 6 | 75 | 0.0000299876 |
| Saccharum spontaneum | Chr3C | 3 | CH_ssp_1000 | 3 | 4 | 0.000585921 |
| Triticum aestivum | Chr3D | 3 | CH_tae_298 | 5 | 5 | 0.0000000000765013 |
| Triticum aestivum | Chr3B | 3 | CH_tae_699 | 4 | 6 | 0.00000125 |
| Triticum dicoccoides | 3B | 3 | CH_tdi_174 | 4 | 4 | 0.0000000601526 |
| Triticum dicoccoides | 3A | 3 | CH_tdi_243 | 4 | 6 | 0.000000900913 |
| Triticum turgidum | chr3A | 3 | CH_ttu_220 | 5 | 10 | 0.0000000404456 |
| Triticum turgidum | chr3B | 3 | CH_ttu_371 | 4 | 7 | 0.00000480258 |
| Allium sativum | chr2 | 4 | CH_asa_279 | 4 | 5 | 0.000000897255 |
| Allium sativum | chr1 | 4 | CH_asa_349 | 4 | 7 | 0.0000062673 |
| Allium sativum | chr8 | 4 | CH_asa_740 | 3 | 4 | 0.000536882 |
| Aegilops tauschii | 3D | 4 | CH_ata_24 | 7 | 8 | 0.0000000000000013835 |
| Hordeum vulgare | chr3H | 4 | CH_hvu_169 | 4 | 6 | 0.000000247127 |
| Oryza alta | GWHAZTO00000006 | 4 | CH_oal_552 | 3 | 4 | 0.000127592 |
| Oryza alta | GWHAZTO00000013 | 4 | CH_oal_639 | 3 | 5 | 0.000318818 |
| Oryza sativa Kitaake | Chr1 | 4 | CH_osak_274 | 3 | 3 | 0.00004009 |
| Secale cereale | GWHASIY00000003 | 4 | CH_sce_443 | 6 | 75 | 0.0000299876 |
| Saccharum spontaneum | Chr3C | 4 | CH_ssp_1000 | 3 | 4 | 0.000585921 |
| Triticum aestivum | Chr3D | 4 | CH_tae_298 | 5 | 5 | 0.0000000000765013 |
| Triticum aestivum | Chr3B | 4 | CH_tae_699 | 4 | 6 | 0.00000125 |
| Triticum dicoccoides | 3B | 4 | CH_tdi_174 | 4 | 4 | 0.0000000601526 |
| Triticum dicoccoides | 3A | 4 | CH_tdi_243 | 4 | 6 | 0.000000900913 |
| Triticum turgidum | chr3A | 4 | CH_ttu_220 | 5 | 10 | 0.0000000404456 |
| Triticum turgidum | chr3B | 4 | CH_ttu_371 | 4 | 7 | 0.00000480258 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0005762 | mitochondrial large ribosomal subunit | 2 |
| GO:0005763 | mitochondrial small ribosomal subunit | 6 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |