Functional clusters

Information

  • Type Gene Ontology
  • Description rubber cis-polyprenylcistransferase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr3 3 CH_asa_680 2 3 0.000348772
Digitaria exilis Dexi_CM05836_chr03B 3 CH_dex_250 3 3 0.00000027644
Eragrostis curvula 4 3 CH_ecu_295 4 13 0.0000000262303
Eragrostis curvula 4 3 CH_ecu_503 3 7 0.00000946641
Glycine max Gm14 3 CH_gma_371 2 2 0.000113867
Panicum hallii Chr03 3 CH_pha_306 2 2 0.000174332
Secale cereale GWHASIY00000005 3 CH_sce_628 2 2 0.000273174
Setaria italica scaffold_7 3 CH_sit_430 2 2 0.000580434
Selaginella moellendorffii scaffold_3 3 CH_smo_48 3 3 0.000000457721
Setaria viridis Chr_07 3 CH_svi_442 2 2 0.000521785
Allium sativum chr3 4 CH_asa_680 2 3 0.000348772
Digitaria exilis Dexi_CM05836_chr03B 4 CH_dex_250 3 3 0.00000027644
Eragrostis curvula 4 4 CH_ecu_295 4 13 0.0000000262303
Eragrostis curvula 4 4 CH_ecu_503 3 7 0.00000946641
Glycine max Gm14 4 CH_gma_371 2 2 0.000113867
Panicum hallii Chr03 4 CH_pha_306 2 2 0.000174332
Secale cereale GWHASIY00000005 4 CH_sce_628 2 2 0.000273174
Setaria italica scaffold_7 4 CH_sit_430 2 2 0.000580434
Selaginella moellendorffii scaffold_3 4 CH_smo_48 3 3 0.000000457721
Setaria viridis Chr_07 4 CH_svi_442 2 2 0.000521785

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001