Functional clusters
Information
- Type Gene Ontology
- Description acquisition of desiccation tolerance in seed
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr3 | 3 | CH_asa_569 | 2 | 2 | 0.000116261 |
| Aegilops tauschii | 1D | 3 | CH_ata_344 | 2 | 2 | 0.00029545 |
| Brachypodium distachyon | Bd2 | 3 | CH_bdi_250 | 2 | 2 | 0.000185002 |
| Digitaria exilis | Dexi_CM05836_chr03B | 3 | CH_dex_597 | 2 | 2 | 0.000334202 |
| Hordeum vulgare | chr1H | 3 | CH_hvu_29 | 5 | 6 | 0.00000000000000256368 |
| Marchantia polymorpha | scaffold_105 | 3 | CH_mpo_40 | 3 | 3 | 0.000000182973 |
| Miscanthus sinensis | Chr16 | 3 | CH_msi_385 | 2 | 2 | 0.0000965966 |
| Panicum hallii | Chr03 | 3 | CH_pha_325 | 2 | 2 | 0.000174332 |
| Sorghum bicolor | Chr09 | 3 | CH_sbi_347 | 2 | 2 | 0.000176005 |
| Secale cereale | GWHASIY00000001 | 3 | CH_sce_312 | 3 | 6 | 0.00000217599 |
| Secale cereale | GWHASIY00000001 | 3 | CH_sce_820 | 2 | 2 | 0.00095611 |
| Setaria italica | scaffold_3 | 3 | CH_sit_139 | 3 | 3 | 0.0000000202148 |
| Selaginella moellendorffii | scaffold_3 | 3 | CH_smo_155 | 2 | 2 | 0.000280112 |
| Saccharum spontaneum | Chr7B | 3 | CH_ssp_816 | 2 | 2 | 0.000238589 |
| Setaria viridis | Chr_03 | 3 | CH_svi_380 | 2 | 2 | 0.000156535 |
| Triticum aestivum | Chr1A | 3 | CH_tae_178 | 5 | 6 | 0.0000000000000472117 |
| Triticum aestivum | Chr1D | 3 | CH_tae_291 | 4 | 4 | 0.0000000000600954 |
| Triticum aestivum | Chr1B | 3 | CH_tae_626 | 3 | 3 | 0.000000428328 |
| Triticum dicoccoides | 1B | 3 | CH_tdi_170 | 3 | 3 | 0.0000000462638 |
| Triticum turgidum | chr1B | 3 | CH_ttu_103 | 4 | 4 | 0.00000000001154 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00098.1 | 3 | CH_zjn_211 | 2 | 3 | 0.000333076 |
| Zea mays B73 | 6 | 3 | CH_zma_303 | 2 | 3 | 0.000460162 |
| Allium sativum | chr3 | 4 | CH_asa_569 | 2 | 2 | 0.000116261 |
| Aegilops tauschii | 1D | 4 | CH_ata_344 | 2 | 2 | 0.00029545 |
| Brachypodium distachyon | Bd2 | 4 | CH_bdi_250 | 2 | 2 | 0.000185002 |
| Digitaria exilis | Dexi_CM05836_chr03B | 4 | CH_dex_597 | 2 | 2 | 0.000334202 |
| Hordeum vulgare | chr1H | 4 | CH_hvu_29 | 5 | 6 | 0.00000000000000256368 |
| Marchantia polymorpha | scaffold_105 | 4 | CH_mpo_40 | 3 | 3 | 0.000000182973 |
| Miscanthus sinensis | Chr16 | 4 | CH_msi_385 | 2 | 2 | 0.0000965966 |
| Panicum hallii | Chr03 | 4 | CH_pha_325 | 2 | 2 | 0.000174332 |
| Sorghum bicolor | Chr09 | 4 | CH_sbi_347 | 2 | 2 | 0.000176005 |
| Secale cereale | GWHASIY00000001 | 4 | CH_sce_312 | 3 | 6 | 0.00000217599 |
| Secale cereale | GWHASIY00000001 | 4 | CH_sce_820 | 2 | 2 | 0.00095611 |
| Setaria italica | scaffold_3 | 4 | CH_sit_139 | 3 | 3 | 0.0000000202148 |
| Selaginella moellendorffii | scaffold_3 | 4 | CH_smo_155 | 2 | 2 | 0.000280112 |
| Saccharum spontaneum | Chr7B | 4 | CH_ssp_816 | 2 | 2 | 0.000238589 |
| Setaria viridis | Chr_03 | 4 | CH_svi_380 | 2 | 2 | 0.000156535 |
| Triticum aestivum | Chr1A | 4 | CH_tae_178 | 5 | 6 | 0.0000000000000472117 |
| Triticum aestivum | Chr1D | 4 | CH_tae_291 | 4 | 4 | 0.0000000000600954 |
| Triticum aestivum | Chr1B | 4 | CH_tae_626 | 3 | 3 | 0.000000428328 |
| Triticum dicoccoides | 1B | 4 | CH_tdi_170 | 3 | 3 | 0.0000000462638 |
| Triticum turgidum | chr1B | 4 | CH_ttu_103 | 4 | 4 | 0.00000000001154 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00098.1 | 4 | CH_zjn_211 | 2 | 3 | 0.000333076 |
| Zea mays B73 | 6 | 4 | CH_zma_303 | 2 | 3 | 0.000460162 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |