Functional clusters
Information
- Type Gene Ontology
- Description seed morphogenesis
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brachypodium distachyon | Bd3 | 3 | CH_bdi_133 | 3 | 3 | 0.00000319452 |
| Lolium perenne | Lp_chr6_0 | 3 | CH_lpe_230 | 3 | 5 | 0.0000150106 |
| Setaria italica | scaffold_1 | 3 | CH_sit_269 | 3 | 5 | 0.0000412088 |
| Solanum lycopersicum | SL4.0ch01 | 3 | CH_sly_240 | 3 | 3 | 0.00000289388 |
| Saccharum spontaneum | Chr5C | 3 | CH_ssp_935 | 3 | 6 | 0.000472703 |
| Setaria viridis | Chr_01 | 3 | CH_svi_237 | 3 | 3 | 0.00000333254 |
| Brachypodium distachyon | Bd3 | 4 | CH_bdi_133 | 3 | 3 | 0.00000319452 |
| Lolium perenne | Lp_chr6_0 | 4 | CH_lpe_230 | 3 | 5 | 0.0000150106 |
| Setaria italica | scaffold_1 | 4 | CH_sit_269 | 3 | 5 | 0.0000412088 |
| Solanum lycopersicum | SL4.0ch01 | 4 | CH_sly_240 | 3 | 3 | 0.00000289388 |
| Saccharum spontaneum | Chr5C | 4 | CH_ssp_935 | 3 | 6 | 0.000472703 |
| Setaria viridis | Chr_01 | 4 | CH_svi_237 | 3 | 3 | 0.00000333254 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |