Functional clusters

Information

  • Type Gene Ontology
  • Description beta-L-arabinosidase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brachypodium distachyon Bd1 3 CH_bdi_84 3 3 0.0000000570449
Hordeum vulgare chr4H 3 CH_hvu_364 2 2 0.000243502
Lolium perenne Lp_chr4_0 3 CH_lpe_333 2 2 0.000192855
Miscanthus sinensis Chr01 3 CH_msi_524 2 3 0.000579558
Oryza brachyantha 3 3 CH_obr_277 2 2 0.000358402
Oryza sativa Kitaake Chr3 3 CH_osak_396 2 2 0.000337714
Oryza sativa ssp. japonica chr03 3 CH_osa_379 2 2 0.000316874
Phyllostachys edulis hic_scaffold_15 3 CH_ped_470 2 2 0.000611185
Secale cereale GWHASIY00000004 3 CH_sce_715 2 2 0.00045529
Sequoiadendron giganteum chr4 3 CH_sgi_1114 2 4 0.000146145
Setaria italica scaffold_9 3 CH_sit_394 2 2 0.00034826
Setaria viridis Chr_09 3 CH_svi_495 2 3 0.000939155
Brachypodium distachyon Bd1 4 CH_bdi_84 3 3 0.0000000570449
Hordeum vulgare chr4H 4 CH_hvu_364 2 2 0.000243502
Lolium perenne Lp_chr4_0 4 CH_lpe_333 2 2 0.000192855
Miscanthus sinensis Chr01 4 CH_msi_524 2 3 0.000579558
Oryza brachyantha 3 4 CH_obr_277 2 2 0.000358402
Oryza sativa Kitaake Chr3 4 CH_osak_396 2 2 0.000337714
Oryza sativa ssp. japonica chr03 4 CH_osa_379 2 2 0.000316874
Phyllostachys edulis hic_scaffold_15 4 CH_ped_470 2 2 0.000611185
Secale cereale GWHASIY00000004 4 CH_sce_715 2 2 0.00045529
Sequoiadendron giganteum chr4 4 CH_sgi_1114 2 4 0.000146145
Setaria italica scaffold_9 4 CH_sit_394 2 2 0.00034826
Setaria viridis Chr_09 4 CH_svi_495 2 3 0.000939155

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001