Functional clusters

Information

  • Type Gene Ontology
  • Description ribosomal subunit

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana Chr2 3 CH_ath_416 4 4 0.0000367994
Amborella trichopoda AmTr_v1.0_scaffold00040 3 CH_atr_240 4 5 0.000168656
Lolium perenne Lp_chr7_0.1 3 CH_lpe_20 12 39 5.75276e-17
Arabidopsis thaliana Chr2 4 CH_ath_416 4 4 0.0000367994
Amborella trichopoda AmTr_v1.0_scaffold00040 4 CH_atr_240 4 5 0.000168656
Lolium perenne Lp_chr7_0.1 4 CH_lpe_20 12 39 5.75276e-17

Available child term results

Ontology identifier Description Number of clusters
GO:0000311 plastid large ribosomal subunit 12
GO:0000312 plastid small ribosomal subunit 6
GO:0005762 mitochondrial large ribosomal subunit 2
GO:0005763 mitochondrial small ribosomal subunit 6
GO:0015934 large ribosomal subunit 16
GO:0022625 cytosolic large ribosomal subunit 4
GO:0022627 cytosolic small ribosomal subunit 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001