Functional clusters

Information

  • Type Gene Ontology
  • Description response to lipid

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brachypodium distachyon Bd2 3 CH_bdi_325 4 7 0.00093919
Eragrostis curvula Contig25 3 CH_ecu_485 7 35 0.00000601999
Oryza alta GWHAZTO00000013 3 CH_oal_774 4 8 0.000835108
Oryza sativa Kitaake Chr1 3 CH_osak_424 4 6 0.000546237
Setaria italica scaffold_3 3 CH_sit_244 9 77 0.000014929
Brachypodium distachyon Bd2 4 CH_bdi_325 4 7 0.00093919
Eragrostis curvula Contig25 4 CH_ecu_485 7 35 0.00000601999
Oryza alta GWHAZTO00000013 4 CH_oal_774 4 8 0.000835108
Oryza sativa Kitaake Chr1 4 CH_osak_424 4 6 0.000546237
Setaria italica scaffold_3 4 CH_sit_244 9 77 0.000014929

Available child term results

Ontology identifier Description Number of clusters
GO:0006982 response to lipid hydroperoxide 2
GO:0009737 response to abscisic acid 2
GO:0009739 response to gibberellin 2
GO:0009741 response to brassinosteroid 10
GO:0009742 brassinosteroid mediated signaling pathway 2
GO:0009753 response to jasmonic acid 4
GO:0009787 regulation of abscisic acid-activated signaling pathway 20
GO:0009788 negative regulation of abscisic acid-activated signaling pathway 20
GO:0009868 jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway 2
GO:0009937 regulation of gibberellic acid mediated signaling pathway 4
GO:0032497 detection of lipopolysaccharide 4
GO:0071215 cellular response to abscisic acid stimulus 6
GO:0071370 cellular response to gibberellin stimulus 2
GO:0071395 cellular response to jasmonic acid stimulus 2
GO:0071398 cellular response to fatty acid 4
GO:0098755 maintenance of seed dormancy by absisic acid 4
GO:1900457 regulation of brassinosteroid mediated signaling pathway 8
GO:1900458 negative regulation of brassinosteroid mediated signaling pathway 2
GO:1900459 positive regulation of brassinosteroid mediated signaling pathway 2
GO:1901527 abscisic acid-activated signaling pathway involved in stomatal movement 6
GO:2000022 regulation of jasmonic acid mediated signaling pathway 8

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001