Functional clusters

Information

  • Type Gene Ontology
  • Description cytoplasmic vesicle

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Hordeum vulgare chr7H 3 CH_hvu_297 7 25 0.0000428879
Oryza sativa ssp. japonica chr06 3 CH_osa_395 6 13 0.000330242
Hordeum vulgare chr7H 4 CH_hvu_297 7 25 0.0000428879
Oryza sativa ssp. japonica chr06 4 CH_osa_395 6 13 0.000330242

Available child term results

Ontology identifier Description Number of clusters
GO:0000814 ESCRT II complex 12
GO:0000938 GARP complex 14
GO:0005768 endosome 2
GO:0005769 early endosome 2
GO:0010008 endosome membrane 4
GO:0030121 AP-1 adaptor complex 2
GO:0030122 AP-2 adaptor complex 2
GO:0030126 COPI vesicle coat 12
GO:0030127 COPII vesicle coat 4
GO:0030134 COPII-coated ER to Golgi transport vesicle 2
GO:0030663 COPI-coated vesicle membrane 2
GO:0031303 integral component of endosome membrane 4
GO:0031313 extrinsic component of endosome membrane 4
GO:0032578 aleurone grain membrane 8
GO:0033095 aleurone grain 2
GO:0035658 Mon1-Ccz1 complex 6
GO:0045334 clathrin-coated endocytic vesicle 2
GO:0070382 exocytic vesicle 2
GO:0099503 secretory vesicle 40
GO:1990071 TRAPPII protein complex 14
GO:1990745 EARP complex 8

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001