Functional clusters
Information
- Type Gene Ontology
- Description GARP complex
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aegilops tauschii | 2D | 3 | CH_ata_405 | 2 | 2 | 0.000738625 |
| Amborella trichopoda | AmTr_v1.0_scaffold00072 | 3 | CH_atr_343 | 2 | 3 | 0.000794407 |
| Magnolia biondii | Chr18 | 3 | CH_mbi_584 | 2 | 2 | 0.000291397 |
| Sequoiadendron giganteum | chr1 | 3 | CH_sgi_432 | 4 | 5 | 0.000000000858305 |
| Sequoiadendron giganteum | chr9 | 3 | CH_sgi_715 | 3 | 3 | 0.000000783163 |
| Sequoiadendron giganteum | chr1 | 3 | CH_sgi_716 | 3 | 3 | 0.000000783163 |
| Saccharum spontaneum | Chr5A | 3 | CH_ssp_352 | 3 | 4 | 0.00000191246 |
| Aegilops tauschii | 2D | 4 | CH_ata_405 | 2 | 2 | 0.000738625 |
| Amborella trichopoda | AmTr_v1.0_scaffold00072 | 4 | CH_atr_343 | 2 | 3 | 0.000794407 |
| Magnolia biondii | Chr18 | 4 | CH_mbi_584 | 2 | 2 | 0.000291397 |
| Sequoiadendron giganteum | chr1 | 4 | CH_sgi_432 | 4 | 5 | 0.000000000858305 |
| Sequoiadendron giganteum | chr9 | 4 | CH_sgi_715 | 3 | 3 | 0.000000783163 |
| Sequoiadendron giganteum | chr1 | 4 | CH_sgi_716 | 3 | 3 | 0.000000783163 |
| Saccharum spontaneum | Chr5A | 4 | CH_ssp_352 | 3 | 4 | 0.00000191246 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |