Functional clusters
Information
- Type Gene Ontology
- Description potassium ion antiporter activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00095 | 3 | CH_atr_243 | 3 | 19 | 0.000183084 |
| Brachypodium distachyon | Bd4 | 3 | CH_bdi_155 | 3 | 5 | 0.0000163063 |
| Brachypodium distachyon | Bd4 | 3 | CH_bdi_63 | 4 | 5 | 0.00000000251476 |
| Cenchrus purpureus | GWHAORA00000009 | 3 | CH_cpu_238 | 4 | 4 | 0.00000000897594 |
| Cenchrus purpureus | GWHAORA00000001 | 3 | CH_cpu_278 | 4 | 5 | 0.0000000448585 |
| Cenchrus purpureus | GWHAORA00000009 | 3 | CH_cpu_370 | 4 | 9 | 0.0000011283 |
| Cenchrus purpureus | GWHAORA00000008 | 3 | CH_cpu_524 | 3 | 3 | 0.0000152813 |
| Digitaria exilis | Dexi_CM05836_chr05B | 3 | CH_dex_642 | 3 | 10 | 0.000521608 |
| Hordeum vulgare | chr4H | 3 | CH_hvu_302 | 3 | 8 | 0.0000503133 |
| Lolium perenne | Lp_chr4_0 | 3 | CH_lpe_160 | 3 | 3 | 0.000000443223 |
| Lolium perenne | Lp_chr5_0 | 3 | CH_lpe_363 | 3 | 17 | 0.000300816 |
| Miscanthus sinensis | Chr09 | 3 | CH_msi_193 | 4 | 10 | 0.000000429793 |
| Miscanthus sinensis | Chr10 | 3 | CH_msi_310 | 3 | 4 | 0.0000203725 |
| Oryza alta | GWHAZTO00000023 | 3 | CH_oal_209 | 4 | 10 | 0.0000000769871 |
| Oryza alta | GWHAZTO00000024 | 3 | CH_oal_298 | 3 | 3 | 0.00000158371 |
| Oryza alta | GWHAZTO00000012 | 3 | CH_oal_71 | 5 | 9 | 0.0000000000102434 |
| Oryza brachyantha | 11 | 3 | CH_obr_182 | 3 | 7 | 0.0000411747 |
| Oryza brachyantha | 12 | 3 | CH_obr_37 | 4 | 4 | 0.000000000316535 |
| Oryza sativa ssp. indica | Chr11 | 3 | CH_osaindica_101 | 4 | 8 | 0.000000028958 |
| Oryza sativa Kitaake | Chr12 | 3 | CH_osak_71 | 5 | 7 | 0.00000000000690209 |
| Oryza sativa Kitaake | Chr11 | 3 | CH_osak_77 | 5 | 8 | 0.0000000000184003 |
| Phyllostachys edulis | hic_scaffold_12 | 3 | CH_ped_33 | 6 | 9 | 0.00000000000000393848 |
| Panicum hallii | Chr03 | 3 | CH_pha_176 | 3 | 3 | 0.00000184382 |
| Sorghum bicolor | Chr05 | 3 | CH_sbi_213 | 3 | 3 | 0.00000500304 |
| Sorghum bicolor | Chr08 | 3 | CH_sbi_238 | 3 | 4 | 0.0000200045 |
| Sorghum bicolor | Chr03 | 3 | CH_sbi_78 | 6 | 35 | 0.000000000565136 |
| Sequoiadendron giganteum | chr1 | 3 | CH_sgi_595 | 3 | 3 | 0.0000000711967 |
| Setaria italica | scaffold_7 | 3 | CH_sit_129 | 4 | 6 | 0.0000000120059 |
| Setaria italica | scaffold_8 | 3 | CH_sit_210 | 3 | 4 | 0.00000229943 |
| Spirodela polyrhiza | pseudo6 | 3 | CH_spo_8 | 7 | 7 | 2.91531e-20 |
| Saccharum spontaneum | Chr3A | 3 | CH_ssp_218 | 6 | 65 | 0.0000000856128 |
| Saccharum spontaneum | Chr5A | 3 | CH_ssp_455 | 3 | 3 | 0.0000105378 |
| Saccharum spontaneum | Chr5C | 3 | CH_ssp_456 | 3 | 3 | 0.0000105378 |
| Saccharum spontaneum | Chr7B | 3 | CH_ssp_660 | 3 | 5 | 0.0001053 |
| Setaria viridis | Chr_05 | 3 | CH_svi_187 | 4 | 15 | 0.000000791904 |
| Setaria viridis | Chr_08 | 3 | CH_svi_213 | 3 | 3 | 0.00000185822 |
| Setaria viridis | Chr_07 | 3 | CH_svi_253 | 3 | 5 | 0.00000743093 |
| Triticum aestivum | Chr4A | 3 | CH_tae_825 | 3 | 3 | 0.0000074485 |
| Triticum aestivum | Chr4D | 3 | CH_tae_826 | 3 | 3 | 0.0000074485 |
| Triticum turgidum | chr4A | 3 | CH_ttu_387 | 3 | 3 | 0.00000658602 |
| Amborella trichopoda | AmTr_v1.0_scaffold00095 | 4 | CH_atr_243 | 3 | 19 | 0.000183084 |
| Brachypodium distachyon | Bd4 | 4 | CH_bdi_155 | 3 | 5 | 0.0000163063 |
| Brachypodium distachyon | Bd4 | 4 | CH_bdi_63 | 4 | 5 | 0.00000000251476 |
| Cenchrus purpureus | GWHAORA00000009 | 4 | CH_cpu_238 | 4 | 4 | 0.00000000897594 |
| Cenchrus purpureus | GWHAORA00000001 | 4 | CH_cpu_278 | 4 | 5 | 0.0000000448585 |
| Cenchrus purpureus | GWHAORA00000009 | 4 | CH_cpu_370 | 4 | 9 | 0.0000011283 |
| Cenchrus purpureus | GWHAORA00000008 | 4 | CH_cpu_524 | 3 | 3 | 0.0000152813 |
| Digitaria exilis | Dexi_CM05836_chr05B | 4 | CH_dex_642 | 3 | 10 | 0.000521608 |
| Hordeum vulgare | chr4H | 4 | CH_hvu_302 | 3 | 8 | 0.0000503133 |
| Lolium perenne | Lp_chr4_0 | 4 | CH_lpe_160 | 3 | 3 | 0.000000443223 |
| Lolium perenne | Lp_chr5_0 | 4 | CH_lpe_363 | 3 | 17 | 0.000300816 |
| Miscanthus sinensis | Chr09 | 4 | CH_msi_193 | 4 | 10 | 0.000000429793 |
| Miscanthus sinensis | Chr10 | 4 | CH_msi_310 | 3 | 4 | 0.0000203725 |
| Oryza alta | GWHAZTO00000023 | 4 | CH_oal_209 | 4 | 10 | 0.0000000769871 |
| Oryza alta | GWHAZTO00000024 | 4 | CH_oal_298 | 3 | 3 | 0.00000158371 |
| Oryza alta | GWHAZTO00000012 | 4 | CH_oal_71 | 5 | 9 | 0.0000000000102434 |
| Oryza brachyantha | 11 | 4 | CH_obr_182 | 3 | 7 | 0.0000411747 |
| Oryza brachyantha | 12 | 4 | CH_obr_37 | 4 | 4 | 0.000000000316535 |
| Oryza sativa ssp. indica | Chr11 | 4 | CH_osaindica_101 | 4 | 8 | 0.000000028958 |
| Oryza sativa Kitaake | Chr12 | 4 | CH_osak_71 | 5 | 7 | 0.00000000000690209 |
| Oryza sativa Kitaake | Chr11 | 4 | CH_osak_77 | 5 | 8 | 0.0000000000184003 |
| Phyllostachys edulis | hic_scaffold_12 | 4 | CH_ped_33 | 6 | 9 | 0.00000000000000393848 |
| Panicum hallii | Chr03 | 4 | CH_pha_176 | 3 | 3 | 0.00000184382 |
| Sorghum bicolor | Chr05 | 4 | CH_sbi_213 | 3 | 3 | 0.00000500304 |
| Sorghum bicolor | Chr08 | 4 | CH_sbi_238 | 3 | 4 | 0.0000200045 |
| Sorghum bicolor | Chr03 | 4 | CH_sbi_78 | 6 | 35 | 0.000000000565136 |
| Sequoiadendron giganteum | chr1 | 4 | CH_sgi_595 | 3 | 3 | 0.0000000711967 |
| Setaria italica | scaffold_7 | 4 | CH_sit_129 | 4 | 6 | 0.0000000120059 |
| Setaria italica | scaffold_8 | 4 | CH_sit_210 | 3 | 4 | 0.00000229943 |
| Spirodela polyrhiza | pseudo6 | 4 | CH_spo_8 | 7 | 7 | 2.91531e-20 |
| Saccharum spontaneum | Chr3A | 4 | CH_ssp_218 | 6 | 65 | 0.0000000856128 |
| Saccharum spontaneum | Chr5A | 4 | CH_ssp_455 | 3 | 3 | 0.0000105378 |
| Saccharum spontaneum | Chr5C | 4 | CH_ssp_456 | 3 | 3 | 0.0000105378 |
| Saccharum spontaneum | Chr7B | 4 | CH_ssp_660 | 3 | 5 | 0.0001053 |
| Setaria viridis | Chr_05 | 4 | CH_svi_187 | 4 | 15 | 0.000000791904 |
| Setaria viridis | Chr_08 | 4 | CH_svi_213 | 3 | 3 | 0.00000185822 |
| Setaria viridis | Chr_07 | 4 | CH_svi_253 | 3 | 5 | 0.00000743093 |
| Triticum aestivum | Chr4A | 4 | CH_tae_825 | 3 | 3 | 0.0000074485 |
| Triticum aestivum | Chr4D | 4 | CH_tae_826 | 3 | 3 | 0.0000074485 |
| Triticum turgidum | chr4A | 4 | CH_ttu_387 | 3 | 3 | 0.00000658602 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0008273 | calcium, potassium:sodium antiporter activity | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |