Functional clusters

Information

  • Type Gene Ontology
  • Description L-cysteine catabolic process to pyruvate

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cenchrus purpureus GWHAORA00000009 3 CH_cpu_730 2 2 0.000185483
Cenchrus purpureus GWHAORA00000007 3 CH_cpu_731 2 2 0.000185483
Digitaria exilis Dexi_CM05836_chrUA 3 CH_dex_411 2 2 0.0000334202
Eragrostis curvula Contig25 3 CH_ecu_589 2 2 0.0000387725
Oryza alta GWHAZTO00000013 3 CH_oal_522 2 2 0.000120908
Oryza alta GWHAZTO00000001 3 CH_oal_657 2 3 0.000362716
Oryza brachyantha 1 3 CH_obr_191 2 2 0.0000597336
Oryza sativa ssp. indica Chr1 3 CH_osaindica_301 2 3 0.000154979
Oryza sativa Kitaake Chr1 3 CH_osak_284 2 2 0.0000562857
Oryza sativa ssp. japonica chr01 3 CH_osa_271 2 2 0.0000528123
Oropetium thomaeum Chromosome_3 3 CH_oth_110 2 2 0.0000711845
Phyllostachys edulis hic_scaffold_16 3 CH_ped_337 2 3 0.000122234
Panicum hallii Chr05 3 CH_pha_245 2 2 0.0000581108
Sorghum bicolor Chr03 3 CH_sbi_259 2 2 0.0000586682
Setaria italica scaffold_5 3 CH_sit_283 2 2 0.0000580434
Saccharum spontaneum Chr3D 3 CH_ssp_784 2 2 0.000238589
Setaria viridis Chr_05 3 CH_svi_294 2 2 0.0000521785
Zoysia japonica ssp. nagirizaki Zjn_sc00005.1 3 CH_zjn_202 2 3 0.000333076
Cenchrus purpureus GWHAORA00000009 4 CH_cpu_730 2 2 0.000185483
Cenchrus purpureus GWHAORA00000007 4 CH_cpu_731 2 2 0.000185483
Digitaria exilis Dexi_CM05836_chrUA 4 CH_dex_411 2 2 0.0000334202
Eragrostis curvula Contig25 4 CH_ecu_589 2 2 0.0000387725
Oryza alta GWHAZTO00000013 4 CH_oal_522 2 2 0.000120908
Oryza alta GWHAZTO00000001 4 CH_oal_657 2 3 0.000362716
Oryza brachyantha 1 4 CH_obr_191 2 2 0.0000597336
Oryza sativa ssp. indica Chr1 4 CH_osaindica_301 2 3 0.000154979
Oryza sativa Kitaake Chr1 4 CH_osak_284 2 2 0.0000562857
Oryza sativa ssp. japonica chr01 4 CH_osa_271 2 2 0.0000528123
Oropetium thomaeum Chromosome_3 4 CH_oth_110 2 2 0.0000711845
Phyllostachys edulis hic_scaffold_16 4 CH_ped_337 2 3 0.000122234
Panicum hallii Chr05 4 CH_pha_245 2 2 0.0000581108
Sorghum bicolor Chr03 4 CH_sbi_259 2 2 0.0000586682
Setaria italica scaffold_5 4 CH_sit_283 2 2 0.0000580434
Saccharum spontaneum Chr3D 4 CH_ssp_784 2 2 0.000238589
Setaria viridis Chr_05 4 CH_svi_294 2 2 0.0000521785
Zoysia japonica ssp. nagirizaki Zjn_sc00005.1 4 CH_zjn_202 2 3 0.000333076

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001