Functional clusters

Information

  • Type Gene Ontology
  • Description isomerase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_228 3 CH_aag_168 5 13 0.000537888
Aegilops tauschii 2D 3 CH_ata_353 4 5 0.000374463
Cenchrus purpureus GWHAORA00000014 3 CH_cpu_184 7 7 0.000000000316015
Cenchrus purpureus GWHAORA00000005 3 CH_cpu_210 7 8 0.00000000250825
Digitaria exilis Dexi_CM05836_chr07B 3 CH_dex_119 7 7 0.000000000100828
Solanum lycopersicum SL4.0ch02 3 CH_sly_132 6 6 0.00000000931433
Saccharum spontaneum Chr5D 3 CH_ssp_204 6 6 0.0000000463787
Saccharum spontaneum Chr5B 3 CH_ssp_419 5 5 0.00000513547
Saccharum spontaneum Chr5A 3 CH_ssp_996 4 4 0.000567903
Triticum aestivum Chr7D 3 CH_tae_1429 4 5 0.000852604
Triticum dicoccoides 2B 3 CH_tdi_241 5 5 0.000000866156
Anthoceros agrestis Sc2ySwM_228 4 CH_aag_168 5 13 0.000537888
Aegilops tauschii 2D 4 CH_ata_353 4 5 0.000374463
Cenchrus purpureus GWHAORA00000014 4 CH_cpu_184 7 7 0.000000000316015
Cenchrus purpureus GWHAORA00000005 4 CH_cpu_210 7 8 0.00000000250825
Digitaria exilis Dexi_CM05836_chr07B 4 CH_dex_119 7 7 0.000000000100828
Solanum lycopersicum SL4.0ch02 4 CH_sly_132 6 6 0.00000000931433
Saccharum spontaneum Chr5D 4 CH_ssp_204 6 6 0.0000000463787
Saccharum spontaneum Chr5B 4 CH_ssp_419 5 5 0.00000513547
Saccharum spontaneum Chr5A 4 CH_ssp_996 4 4 0.000567903
Triticum aestivum Chr7D 4 CH_tae_1429 4 5 0.000852604
Triticum dicoccoides 2B 4 CH_tdi_241 5 5 0.000000866156

Available child term results

Ontology identifier Description Number of clusters
GO:0000247 C-8 sterol isomerase activity 28
GO:0000250 lanosterol synthase activity 120
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 4
GO:0003756 protein disulfide isomerase activity 2
GO:0003916 DNA topoisomerase activity 6
GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity 18
GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity 6
GO:0003949 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity 6
GO:0003978 UDP-glucose 4-epimerase activity 2
GO:0004034 aldose 1-epimerase activity 6
GO:0004165 dodecenoyl-CoA delta-isomerase activity 42
GO:0004347 glucose-6-phosphate isomerase activity 4
GO:0004476 mannose-6-phosphate isomerase activity 6
GO:0004512 inositol-3-phosphate synthase activity 6
GO:0004610 phosphoacetylglucosamine mutase activity 2
GO:0004614 phosphoglucomutase activity 4
GO:0004615 phosphomannomutase activity 6
GO:0004640 phosphoribosylanthranilate isomerase activity 2
GO:0004751 ribose-5-phosphate isomerase activity 2
GO:0004807 triose-phosphate isomerase activity 6
GO:0008837 diaminopimelate epimerase activity 10
GO:0008909 isochorismate synthase activity 6
GO:0009905 ent-copalyl diphosphate synthase activity 14
GO:0009982 pseudouridine synthase activity 18
GO:0016034 maleylacetoacetate isomerase activity 44
GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives 2
GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives 2
GO:0016871 cycloartenol synthase activity 4
GO:0016872 intramolecular lyase activity 6
GO:0018114 threonine racemase activity 2
GO:0042286 glutamate-1-semialdehyde 2,1-aminomutase activity 6
GO:0045430 chalcone isomerase activity 12
GO:0045435 lycopene epsilon cyclase activity 2
GO:0045436 lycopene beta cyclase activity 4
GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity 6
GO:0046608 carotenoid isomerase activity 4
GO:0047661 amino-acid racemase activity 26
GO:0047750 cholestenol delta-isomerase activity 2
GO:0047793 cycloeucalenol cycloisomerase activity 10
GO:0047918 GDP-mannose 3,5-epimerase activity 4
GO:0050220 prostaglandin-E synthase activity 2
GO:0050486 intramolecular transferase activity, transferring hydroxy groups 10
GO:0051750 delta3,5-delta2,4-dienoyl-CoA isomerase activity 10
GO:0052691 UDP-arabinopyranose mutase activity 8
GO:0052856 NADHX epimerase activity 2
GO:0090471 9,15,9'-tri-cis-zeta-carotene isomerase activity 6

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001