Functional clusters
Information
- Type Gene Ontology
- Description pseudouridine synthase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Asparagus officinalis | AsparagusV1_04 | 3 | CH_aof_67 | 3 | 4 | 0.0000527696 |
| Magnolia biondii | Chr11 | 3 | CH_mbi_242 | 4 | 12 | 0.000000403992 |
| Oryza alta | GWHAZTO00000017 | 3 | CH_oal_386 | 3 | 3 | 0.0000151086 |
| Oryza alta | GWHAZTO00000001 | 3 | CH_oal_449 | 3 | 4 | 0.0000604106 |
| Oryza alta | GWHAZTO00000014 | 3 | CH_oal_739 | 4 | 40 | 0.000699064 |
| Oropetium thomaeum | Chromosome_2 | 3 | CH_oth_200 | 3 | 7 | 0.000470083 |
| Secale cereale | GWHASIY00000002 | 3 | CH_sce_582 | 3 | 6 | 0.000161488 |
| Sequoiadendron giganteum | chr4 | 3 | CH_sgi_228 | 6 | 7 | 0.000000000000020521 |
| Sequoiadendron giganteum | chr3 | 3 | CH_sgi_872 | 3 | 3 | 0.0000130076 |
| Asparagus officinalis | AsparagusV1_04 | 4 | CH_aof_67 | 3 | 4 | 0.0000527696 |
| Magnolia biondii | Chr11 | 4 | CH_mbi_242 | 4 | 12 | 0.000000403992 |
| Oryza alta | GWHAZTO00000017 | 4 | CH_oal_386 | 3 | 3 | 0.0000151086 |
| Oryza alta | GWHAZTO00000001 | 4 | CH_oal_449 | 3 | 4 | 0.0000604106 |
| Oryza alta | GWHAZTO00000014 | 4 | CH_oal_739 | 4 | 40 | 0.000699064 |
| Oropetium thomaeum | Chromosome_2 | 4 | CH_oth_200 | 3 | 7 | 0.000470083 |
| Secale cereale | GWHASIY00000002 | 4 | CH_sce_582 | 3 | 6 | 0.000161488 |
| Sequoiadendron giganteum | chr4 | 4 | CH_sgi_228 | 6 | 7 | 0.000000000000020521 |
| Sequoiadendron giganteum | chr3 | 4 | CH_sgi_872 | 3 | 3 | 0.0000130076 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |