Functional clusters
Information
- Type Gene Ontology
- Description oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00002 | 3 | CH_atr_337 | 2 | 2 | 0.000794407 |
| Calamus simplicifolius | scaffold374 | 3 | CH_calsi_134 | 3 | 9 | 0.0000113499 |
| Cenchrus purpureus | GWHAORA00000004 | 3 | CH_cpu_723 | 3 | 19 | 0.000166432 |
| Elaeis guineensis | EG5.1_Chr6 | 3 | CH_egu_258 | 2 | 2 | 0.000568397 |
| Setaria italica | scaffold_9 | 3 | CH_sit_401 | 2 | 2 | 0.00034826 |
| Setaria viridis | Chr_09 | 3 | CH_svi_417 | 2 | 2 | 0.000313071 |
| Amborella trichopoda | AmTr_v1.0_scaffold00002 | 4 | CH_atr_337 | 2 | 2 | 0.000794407 |
| Calamus simplicifolius | scaffold374 | 4 | CH_calsi_134 | 3 | 9 | 0.0000113499 |
| Cenchrus purpureus | GWHAORA00000004 | 4 | CH_cpu_723 | 3 | 19 | 0.000166432 |
| Elaeis guineensis | EG5.1_Chr6 | 4 | CH_egu_258 | 2 | 2 | 0.000568397 |
| Setaria italica | scaffold_9 | 4 | CH_sit_401 | 2 | 2 | 0.00034826 |
| Setaria viridis | Chr_09 | 4 | CH_svi_417 | 2 | 2 | 0.000313071 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0062047 | pipecolic acid N-hydroxylase | 22 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |