Functional clusters
Information
- Type Gene Ontology
- Description CCAAT-binding factor complex
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr3 | 3 | CH_asa_396 | 3 | 6 | 0.0000128797 |
| Aegilops tauschii | 7D | 3 | CH_ata_101 | 4 | 6 | 0.0000000260161 |
| Aegilops tauschii | 6D | 3 | CH_ata_176 | 3 | 3 | 0.00000414641 |
| Brachypodium distachyon | Bd1 | 3 | CH_bdi_114 | 3 | 3 | 0.00000125499 |
| Cenchrus purpureus | GWHAORA00000004 | 3 | CH_cpu_472 | 3 | 3 | 0.00000582008 |
| Cenchrus purpureus | GWHAORA00000012 | 3 | CH_cpu_554 | 3 | 4 | 0.0000232727 |
| Hordeum vulgare | chr7H | 3 | CH_hvu_212 | 3 | 4 | 0.00000282587 |
| Miscanthus sinensis | Chr06 | 3 | CH_msi_137 | 4 | 5 | 0.00000000878568 |
| Oropetium thomaeum | Chromosome_2 | 3 | CH_oth_70 | 3 | 3 | 0.00000167225 |
| Phyllostachys edulis | hic_scaffold_14 | 3 | CH_ped_227 | 3 | 3 | 0.00000383516 |
| Sorghum bicolor | Chr10 | 3 | CH_sbi_94 | 4 | 5 | 0.00000000413377 |
| Secale cereale | GWHASIY00000006 | 3 | CH_sce_304 | 3 | 3 | 0.00000174127 |
| Setaria italica | scaffold_4 | 3 | CH_sit_98 | 4 | 4 | 0.000000000587287 |
| Solanum lycopersicum | SL4.0ch07 | 3 | CH_sly_122 | 5 | 10 | 0.00000000530551 |
| Solanum lycopersicum | SL4.0ch02 | 3 | CH_sly_301 | 3 | 3 | 0.0000281946 |
| Solanum lycopersicum | SL4.0ch05 | 3 | CH_sly_79 | 6 | 12 | 0.0000000000159763 |
| Setaria viridis | Chr_04 | 3 | CH_svi_92 | 4 | 4 | 0.000000000426641 |
| Triticum aestivum | Chr7A | 3 | CH_tae_229 | 5 | 5 | 0.00000000000157271 |
| Triticum aestivum | Chr6B | 3 | CH_tae_836 | 3 | 3 | 0.00000907887 |
| Triticum aestivum | Chr6A | 3 | CH_tae_837 | 3 | 3 | 0.00000907887 |
| Triticum aestivum | Chr7B | 3 | CH_tae_838 | 3 | 3 | 0.00000907887 |
| Triticum aestivum | Chr6D | 3 | CH_tae_839 | 3 | 3 | 0.00000907887 |
| Triticum aestivum | Chr7D | 3 | CH_tae_840 | 3 | 3 | 0.00000907887 |
| Triticum dicoccoides | 7B | 3 | CH_tdi_315 | 3 | 3 | 0.00000943781 |
| Triticum dicoccoides | 6B | 3 | CH_tdi_373 | 3 | 4 | 0.0000377368 |
| Triticum dicoccoides | 7A | 3 | CH_tdi_49 | 6 | 7 | 0.00000000000000706974 |
| Triticum turgidum | chr6A | 3 | CH_ttu_393 | 3 | 3 | 0.00000799406 |
| Triticum turgidum | chr6B | 3 | CH_ttu_447 | 3 | 4 | 0.0000319645 |
| Triticum turgidum | chr7A | 3 | CH_ttu_81 | 5 | 5 | 0.00000000000169846 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00007.1 | 3 | CH_zjn_96 | 3 | 5 | 0.0000198996 |
| Allium sativum | chr3 | 4 | CH_asa_396 | 3 | 6 | 0.0000128797 |
| Aegilops tauschii | 7D | 4 | CH_ata_101 | 4 | 6 | 0.0000000260161 |
| Aegilops tauschii | 6D | 4 | CH_ata_176 | 3 | 3 | 0.00000414641 |
| Brachypodium distachyon | Bd1 | 4 | CH_bdi_114 | 3 | 3 | 0.00000125499 |
| Cenchrus purpureus | GWHAORA00000004 | 4 | CH_cpu_472 | 3 | 3 | 0.00000582008 |
| Cenchrus purpureus | GWHAORA00000012 | 4 | CH_cpu_554 | 3 | 4 | 0.0000232727 |
| Hordeum vulgare | chr7H | 4 | CH_hvu_212 | 3 | 4 | 0.00000282587 |
| Miscanthus sinensis | Chr06 | 4 | CH_msi_137 | 4 | 5 | 0.00000000878568 |
| Oropetium thomaeum | Chromosome_2 | 4 | CH_oth_70 | 3 | 3 | 0.00000167225 |
| Phyllostachys edulis | hic_scaffold_14 | 4 | CH_ped_227 | 3 | 3 | 0.00000383516 |
| Sorghum bicolor | Chr10 | 4 | CH_sbi_94 | 4 | 5 | 0.00000000413377 |
| Secale cereale | GWHASIY00000006 | 4 | CH_sce_304 | 3 | 3 | 0.00000174127 |
| Setaria italica | scaffold_4 | 4 | CH_sit_98 | 4 | 4 | 0.000000000587287 |
| Solanum lycopersicum | SL4.0ch07 | 4 | CH_sly_122 | 5 | 10 | 0.00000000530551 |
| Solanum lycopersicum | SL4.0ch02 | 4 | CH_sly_301 | 3 | 3 | 0.0000281946 |
| Solanum lycopersicum | SL4.0ch05 | 4 | CH_sly_79 | 6 | 12 | 0.0000000000159763 |
| Setaria viridis | Chr_04 | 4 | CH_svi_92 | 4 | 4 | 0.000000000426641 |
| Triticum aestivum | Chr7A | 4 | CH_tae_229 | 5 | 5 | 0.00000000000157271 |
| Triticum aestivum | Chr6B | 4 | CH_tae_836 | 3 | 3 | 0.00000907887 |
| Triticum aestivum | Chr6A | 4 | CH_tae_837 | 3 | 3 | 0.00000907887 |
| Triticum aestivum | Chr7B | 4 | CH_tae_838 | 3 | 3 | 0.00000907887 |
| Triticum aestivum | Chr6D | 4 | CH_tae_839 | 3 | 3 | 0.00000907887 |
| Triticum aestivum | Chr7D | 4 | CH_tae_840 | 3 | 3 | 0.00000907887 |
| Triticum dicoccoides | 7B | 4 | CH_tdi_315 | 3 | 3 | 0.00000943781 |
| Triticum dicoccoides | 6B | 4 | CH_tdi_373 | 3 | 4 | 0.0000377368 |
| Triticum dicoccoides | 7A | 4 | CH_tdi_49 | 6 | 7 | 0.00000000000000706974 |
| Triticum turgidum | chr6A | 4 | CH_ttu_393 | 3 | 3 | 0.00000799406 |
| Triticum turgidum | chr6B | 4 | CH_ttu_447 | 3 | 4 | 0.0000319645 |
| Triticum turgidum | chr7A | 4 | CH_ttu_81 | 5 | 5 | 0.00000000000169846 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00007.1 | 4 | CH_zjn_96 | 3 | 5 | 0.0000198996 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |