Functional clusters
Information
- Type Gene Ontology
- Description protein autoprocessing
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis thaliana | Chr1 | 3 | CH_ath_256 | 3 | 6 | 0.00000137864 |
| Brachypodium distachyon | Bd2 | 3 | CH_bdi_240 | 2 | 2 | 0.000185002 |
| Chara braunii | BFEA01000178 | 3 | CH_cbr_31 | 5 | 36 | 0.0000000189649 |
| Cenchrus purpureus | GWHAORA00000008 | 3 | CH_cpu_893 | 2 | 2 | 0.00064919 |
| Cenchrus purpureus | GWHAORA00000001 | 3 | CH_cpu_894 | 2 | 2 | 0.00064919 |
| Digitaria exilis | Dexi_CM05836_chr03B | 3 | CH_dex_100 | 4 | 4 | 0.0000000000141105 |
| Digitaria exilis | Dexi_CM05836_chr03A | 3 | CH_dex_265 | 3 | 4 | 0.000000562881 |
| Glycine max | Gm08 | 3 | CH_gma_465 | 2 | 3 | 0.000341591 |
| Miscanthus sinensis | Chr16 | 3 | CH_msi_157 | 3 | 3 | 0.0000000544311 |
| Miscanthus sinensis | Chr17 | 3 | CH_msi_543 | 2 | 2 | 0.000676176 |
| Oryza alta | GWHAZTO00000005 | 3 | CH_oal_623 | 2 | 2 | 0.00030227 |
| Oryza sativa Kitaake | Chr5 | 3 | CH_osak_346 | 2 | 2 | 0.000168857 |
| Oropetium thomaeum | Chromosome_5 | 3 | CH_oth_161 | 2 | 2 | 0.000213554 |
| Panicum hallii | Chr03 | 3 | CH_pha_106 | 3 | 3 | 0.0000000202618 |
| Sorghum bicolor | Chr09 | 3 | CH_sbi_116 | 3 | 3 | 0.0000000206524 |
| Sequoiadendron giganteum | chr1 | 3 | CH_sgi_1222 | 2 | 2 | 0.000292291 |
| Setaria italica | scaffold_3 | 3 | CH_sit_135 | 3 | 3 | 0.0000000202148 |
| Selaginella moellendorffii | scaffold_122 | 3 | CH_smo_44 | 5 | 14 | 0.0000000745083 |
| Selaginella moellendorffii | scaffold_32 | 3 | CH_smo_79 | 4 | 12 | 0.000017949 |
| Setaria viridis | Chr_03 | 3 | CH_svi_125 | 3 | 3 | 0.000000016336 |
| Arabidopsis thaliana | Chr1 | 4 | CH_ath_256 | 3 | 6 | 0.00000137864 |
| Brachypodium distachyon | Bd2 | 4 | CH_bdi_240 | 2 | 2 | 0.000185002 |
| Chara braunii | BFEA01000178 | 4 | CH_cbr_31 | 5 | 36 | 0.0000000189649 |
| Cenchrus purpureus | GWHAORA00000008 | 4 | CH_cpu_893 | 2 | 2 | 0.00064919 |
| Cenchrus purpureus | GWHAORA00000001 | 4 | CH_cpu_894 | 2 | 2 | 0.00064919 |
| Digitaria exilis | Dexi_CM05836_chr03B | 4 | CH_dex_100 | 4 | 4 | 0.0000000000141105 |
| Digitaria exilis | Dexi_CM05836_chr03A | 4 | CH_dex_265 | 3 | 4 | 0.000000562881 |
| Glycine max | Gm08 | 4 | CH_gma_465 | 2 | 3 | 0.000341591 |
| Miscanthus sinensis | Chr16 | 4 | CH_msi_157 | 3 | 3 | 0.0000000544311 |
| Miscanthus sinensis | Chr17 | 4 | CH_msi_543 | 2 | 2 | 0.000676176 |
| Oryza alta | GWHAZTO00000005 | 4 | CH_oal_623 | 2 | 2 | 0.00030227 |
| Oryza sativa Kitaake | Chr5 | 4 | CH_osak_346 | 2 | 2 | 0.000168857 |
| Oropetium thomaeum | Chromosome_5 | 4 | CH_oth_161 | 2 | 2 | 0.000213554 |
| Panicum hallii | Chr03 | 4 | CH_pha_106 | 3 | 3 | 0.0000000202618 |
| Sorghum bicolor | Chr09 | 4 | CH_sbi_116 | 3 | 3 | 0.0000000206524 |
| Sequoiadendron giganteum | chr1 | 4 | CH_sgi_1222 | 2 | 2 | 0.000292291 |
| Setaria italica | scaffold_3 | 4 | CH_sit_135 | 3 | 3 | 0.0000000202148 |
| Selaginella moellendorffii | scaffold_122 | 4 | CH_smo_44 | 5 | 14 | 0.0000000745083 |
| Selaginella moellendorffii | scaffold_32 | 4 | CH_smo_79 | 4 | 12 | 0.000017949 |
| Setaria viridis | Chr_03 | 4 | CH_svi_125 | 3 | 3 | 0.000000016336 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |