Functional clusters
Information
- Type Gene Ontology
- Description solute:proton antiporter activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr8 | 3 | CH_asa_585 | 3 | 3 | 0.000140116 |
| Amborella trichopoda | AmTr_v1.0_scaffold00068 | 3 | CH_atr_108 | 5 | 15 | 0.000000247169 |
| Brachypodium distachyon | Bd4 | 3 | CH_bdi_259 | 4 | 23 | 0.00032133 |
| Calamus simplicifolius | scaffold28 | 3 | CH_calsi_13 | 7 | 12 | 0.0000000000000306007 |
| Calamus simplicifolius | scaffold121 | 3 | CH_calsi_219 | 3 | 4 | 0.000161683 |
| Calamus simplicifolius | scaffold83 | 3 | CH_calsi_329 | 3 | 6 | 0.0008071 |
| Ceratophyllum demersum | 5 | 3 | CH_cde_33 | 5 | 10 | 0.000000036714 |
| Cenchrus purpureus | GWHAORA00000008 | 3 | CH_cpu_542 | 6 | 58 | 0.0000196904 |
| Eragrostis curvula | 7 | 3 | CH_ecu_366 | 4 | 5 | 0.000000255833 |
| Elaeis guineensis | EG5.1_Chr14 | 3 | CH_egu_59 | 4 | 4 | 0.000000258325 |
| Glycine max | Gm14 | 3 | CH_gma_409 | 3 | 3 | 0.000213441 |
| Musa acuminata | chr01 | 3 | CH_mac_239 | 3 | 4 | 0.000507605 |
| Musa acuminata | chr03 | 3 | CH_mac_76 | 4 | 5 | 0.000000937343 |
| Magnolia biondii | Chr15 | 3 | CH_mbi_90 | 8 | 70 | 0.0000000000332141 |
| Miscanthus sinensis | Chr15 | 3 | CH_msi_228 | 6 | 59 | 0.00000206896 |
| Oryza alta | GWHAZTO00000021 | 3 | CH_oal_432 | 3 | 3 | 0.0000428212 |
| Oryza brachyantha | 12 | 3 | CH_obr_283 | 4 | 22 | 0.000420696 |
| Sorghum bicolor | Chr08 | 3 | CH_sbi_371 | 4 | 23 | 0.000311364 |
| Secale cereale | GWHASIY00000005 | 3 | CH_sce_196 | 4 | 4 | 0.0000000550953 |
| Sequoiadendron giganteum | chr9 | 3 | CH_sgi_505 | 4 | 4 | 0.0000000124728 |
| Sequoiadendron giganteum | chr7 | 3 | CH_sgi_889 | 3 | 3 | 0.0000176568 |
| Setaria italica | scaffold_3 | 3 | CH_sit_367 | 4 | 19 | 0.000184696 |
| Setaria viridis | Chr_03 | 3 | CH_svi_399 | 4 | 23 | 0.000305994 |
| Vanilla planifolia | CM028155.1 | 3 | CH_vpl_180 | 3 | 3 | 0.0000584727 |
| Vanilla planifolia | JADCNL010000016.1 | 3 | CH_vpl_181 | 3 | 3 | 0.0000584727 |
| Zostera marina | Chr05 | 3 | CH_zosmarina_107 | 3 | 3 | 0.0000998584 |
| Allium sativum | chr8 | 4 | CH_asa_585 | 3 | 3 | 0.000140116 |
| Amborella trichopoda | AmTr_v1.0_scaffold00068 | 4 | CH_atr_108 | 5 | 15 | 0.000000247169 |
| Brachypodium distachyon | Bd4 | 4 | CH_bdi_259 | 4 | 23 | 0.00032133 |
| Calamus simplicifolius | scaffold28 | 4 | CH_calsi_13 | 7 | 12 | 0.0000000000000306007 |
| Calamus simplicifolius | scaffold121 | 4 | CH_calsi_219 | 3 | 4 | 0.000161683 |
| Calamus simplicifolius | scaffold83 | 4 | CH_calsi_329 | 3 | 6 | 0.0008071 |
| Ceratophyllum demersum | 5 | 4 | CH_cde_33 | 5 | 10 | 0.000000036714 |
| Cenchrus purpureus | GWHAORA00000008 | 4 | CH_cpu_542 | 6 | 58 | 0.0000196904 |
| Eragrostis curvula | 7 | 4 | CH_ecu_366 | 4 | 5 | 0.000000255833 |
| Elaeis guineensis | EG5.1_Chr14 | 4 | CH_egu_59 | 4 | 4 | 0.000000258325 |
| Glycine max | Gm14 | 4 | CH_gma_409 | 3 | 3 | 0.000213441 |
| Musa acuminata | chr01 | 4 | CH_mac_239 | 3 | 4 | 0.000507605 |
| Musa acuminata | chr03 | 4 | CH_mac_76 | 4 | 5 | 0.000000937343 |
| Magnolia biondii | Chr15 | 4 | CH_mbi_90 | 8 | 70 | 0.0000000000332141 |
| Miscanthus sinensis | Chr15 | 4 | CH_msi_228 | 6 | 59 | 0.00000206896 |
| Oryza alta | GWHAZTO00000021 | 4 | CH_oal_432 | 3 | 3 | 0.0000428212 |
| Oryza brachyantha | 12 | 4 | CH_obr_283 | 4 | 22 | 0.000420696 |
| Sorghum bicolor | Chr08 | 4 | CH_sbi_371 | 4 | 23 | 0.000311364 |
| Secale cereale | GWHASIY00000005 | 4 | CH_sce_196 | 4 | 4 | 0.0000000550953 |
| Sequoiadendron giganteum | chr9 | 4 | CH_sgi_505 | 4 | 4 | 0.0000000124728 |
| Sequoiadendron giganteum | chr7 | 4 | CH_sgi_889 | 3 | 3 | 0.0000176568 |
| Setaria italica | scaffold_3 | 4 | CH_sit_367 | 4 | 19 | 0.000184696 |
| Setaria viridis | Chr_03 | 4 | CH_svi_399 | 4 | 23 | 0.000305994 |
| Vanilla planifolia | CM028155.1 | 4 | CH_vpl_180 | 3 | 3 | 0.0000584727 |
| Vanilla planifolia | JADCNL010000016.1 | 4 | CH_vpl_181 | 3 | 3 | 0.0000584727 |
| Zostera marina | Chr05 | 4 | CH_zosmarina_107 | 3 | 3 | 0.0000998584 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0005451 | monovalent cation:proton antiporter activity | 16 |
| GO:0010348 | lithium:proton antiporter activity | 2 |
| GO:0015369 | calcium:proton antiporter activity | 6 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |