Functional clusters
Information
- Type Gene Ontology
- Description monosaccharide transmembrane transporter activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Ananas comosus | LG12 | 3 | CH_aco_120 | 3 | 6 | 0.000416906 |
| Aegilops tauschii | 2D | 3 | CH_ata_85 | 5 | 11 | 0.00000000408882 |
| Brachypodium distachyon | Bd5 | 3 | CH_bdi_27 | 6 | 6 | 0.0000000000000269954 |
| Cenchrus purpureus | GWHAORA00000005 | 3 | CH_cpu_141 | 6 | 8 | 0.00000000000896396 |
| Cenchrus purpureus | GWHAORA00000005 | 3 | CH_cpu_715 | 3 | 3 | 0.000151946 |
| Dioscorea dumetorum | contig39 | 3 | CH_ddu_165 | 3 | 3 | 0.000116104 |
| Dioscorea dumetorum | contig542 | 3 | CH_ddu_26 | 8 | 9 | 6.69537e-18 |
| Dioscorea dumetorum | contig544 | 3 | CH_ddu_51 | 6 | 9 | 0.0000000000318381 |
| Digitaria exilis | Dexi_CM05836_chr07A | 3 | CH_dex_224 | 5 | 15 | 0.0000000970565 |
| Eragrostis curvula | Contig30 | 3 | CH_ecu_406 | 4 | 9 | 0.000000899506 |
| Elaeis guineensis | EG5.1_Chr12 | 3 | CH_egu_108 | 3 | 3 | 0.0000272473 |
| Glycine max | Gm04 | 3 | CH_gma_313 | 3 | 3 | 0.0000328039 |
| Hordeum vulgare | chr2H | 3 | CH_hvu_81 | 5 | 8 | 0.000000000428871 |
| Lolium perenne | Lp_chr2_0 | 3 | CH_lpe_95 | 4 | 4 | 0.00000000407676 |
| Miscanthus sinensis | Chr12 | 3 | CH_msi_59 | 6 | 12 | 0.00000000000275429 |
| Oryza alta | GWHAZTO00000016 | 3 | CH_oal_154 | 5 | 14 | 0.0000000112994 |
| Oryza alta | GWHAZTO00000004 | 3 | CH_oal_72 | 6 | 15 | 0.000000000015085 |
| Oryza sativa ssp. indica | Chr2 | 3 | CH_osaindica_229 | 3 | 3 | 0.0000285841 |
| Oryza sativa ssp. indica | Chr4 | 3 | CH_osaindica_49 | 6 | 10 | 0.00000000000337806 |
| Oryza sativa Kitaake | Chr2 | 3 | CH_osak_272 | 3 | 3 | 0.0000339311 |
| Oryza sativa Kitaake | Chr4 | 3 | CH_osak_62 | 6 | 8 | 0.000000000000692377 |
| Oryza sativa ssp. japonica | chr04 | 3 | CH_osa_115 | 5 | 14 | 0.0000000177328 |
| Oropetium thomaeum | Chromosome_6 | 3 | CH_oth_28 | 5 | 8 | 0.00000000153357 |
| Phyllostachys edulis | hic_scaffold_17 | 3 | CH_ped_404 | 3 | 4 | 0.000275902 |
| Phyllostachys edulis | hic_scaffold_24 | 3 | CH_ped_91 | 5 | 6 | 0.000000000473421 |
| Panicum hallii | Chr07 | 3 | CH_pha_54 | 6 | 11 | 0.0000000000076047 |
| Populus trichocarpa | Chr08 | 3 | CH_ptr_443 | 3 | 5 | 0.000533308 |
| Sorghum bicolor | Chr06 | 3 | CH_sbi_109 | 5 | 12 | 0.0000000141054 |
| Secale cereale | GWHASIY00000006 | 3 | CH_sce_112 | 6 | 13 | 0.000000000193821 |
| Secale cereale | GWHASIY00000007 | 3 | CH_sce_655 | 3 | 4 | 0.000308228 |
| Secale cereale | GWHASIY00000006 | 3 | CH_sce_656 | 3 | 4 | 0.000308228 |
| Sequoiadendron giganteum | chr1 | 3 | CH_sgi_494 | 4 | 4 | 0.0000000071018 |
| Setaria italica | scaffold_7 | 3 | CH_sit_76 | 6 | 11 | 0.00000000000756069 |
| Saccharum spontaneum | Chr5A | 3 | CH_ssp_121 | 6 | 12 | 0.000000000202531 |
| Saccharum spontaneum | Chr5C | 3 | CH_ssp_366 | 4 | 6 | 0.0000024908 |
| Saccharum spontaneum | Chr5B | 3 | CH_ssp_425 | 4 | 7 | 0.00000580641 |
| Saccharum spontaneum | Chr5D | 3 | CH_ssp_514 | 4 | 9 | 0.0000208639 |
| Setaria viridis | Chr_07 | 3 | CH_svi_70 | 6 | 11 | 0.0000000000035506 |
| Triticum aestivum | Chr5A | 3 | CH_tae_1177 | 3 | 4 | 0.000254916 |
| Triticum aestivum | Chr5B | 3 | CH_tae_1178 | 3 | 4 | 0.000254916 |
| Triticum aestivum | Chr5D | 3 | CH_tae_1179 | 3 | 4 | 0.000254916 |
| Triticum aestivum | Chr2B | 3 | CH_tae_369 | 5 | 8 | 0.00000000238706 |
| Triticum aestivum | Chr2A | 3 | CH_tae_370 | 5 | 8 | 0.00000000238706 |
| Triticum aestivum | Chr2D | 3 | CH_tae_435 | 5 | 10 | 0.0000000107272 |
| Triticum dicoccoides | 2B | 3 | CH_tdi_106 | 5 | 6 | 0.00000000011045 |
| Triticum dicoccoides | 2A | 3 | CH_tdi_118 | 5 | 7 | 0.000000000386333 |
| Triticum turgidum | chr2B | 3 | CH_ttu_217 | 4 | 5 | 0.0000000312362 |
| Triticum turgidum | chr5A | 3 | CH_ttu_527 | 3 | 4 | 0.000153661 |
| Triticum turgidum | chr5B | 3 | CH_ttu_528 | 3 | 4 | 0.000153661 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00006.1 | 3 | CH_zjn_173 | 3 | 6 | 0.000166637 |
| Ananas comosus | LG12 | 4 | CH_aco_120 | 3 | 6 | 0.000416906 |
| Aegilops tauschii | 2D | 4 | CH_ata_85 | 5 | 11 | 0.00000000408882 |
| Brachypodium distachyon | Bd5 | 4 | CH_bdi_27 | 6 | 6 | 0.0000000000000269954 |
| Cenchrus purpureus | GWHAORA00000005 | 4 | CH_cpu_141 | 6 | 8 | 0.00000000000896396 |
| Cenchrus purpureus | GWHAORA00000005 | 4 | CH_cpu_715 | 3 | 3 | 0.000151946 |
| Dioscorea dumetorum | contig39 | 4 | CH_ddu_165 | 3 | 3 | 0.000116104 |
| Dioscorea dumetorum | contig542 | 4 | CH_ddu_26 | 8 | 9 | 6.69537e-18 |
| Dioscorea dumetorum | contig544 | 4 | CH_ddu_51 | 6 | 9 | 0.0000000000318381 |
| Digitaria exilis | Dexi_CM05836_chr07A | 4 | CH_dex_224 | 5 | 15 | 0.0000000970565 |
| Eragrostis curvula | Contig30 | 4 | CH_ecu_406 | 4 | 9 | 0.000000899506 |
| Elaeis guineensis | EG5.1_Chr12 | 4 | CH_egu_108 | 3 | 3 | 0.0000272473 |
| Glycine max | Gm04 | 4 | CH_gma_313 | 3 | 3 | 0.0000328039 |
| Hordeum vulgare | chr2H | 4 | CH_hvu_81 | 5 | 8 | 0.000000000428871 |
| Lolium perenne | Lp_chr2_0 | 4 | CH_lpe_95 | 4 | 4 | 0.00000000407676 |
| Miscanthus sinensis | Chr12 | 4 | CH_msi_59 | 6 | 12 | 0.00000000000275429 |
| Oryza alta | GWHAZTO00000016 | 4 | CH_oal_154 | 5 | 14 | 0.0000000112994 |
| Oryza alta | GWHAZTO00000004 | 4 | CH_oal_72 | 6 | 15 | 0.000000000015085 |
| Oryza sativa ssp. indica | Chr2 | 4 | CH_osaindica_229 | 3 | 3 | 0.0000285841 |
| Oryza sativa ssp. indica | Chr4 | 4 | CH_osaindica_49 | 6 | 10 | 0.00000000000337806 |
| Oryza sativa Kitaake | Chr2 | 4 | CH_osak_272 | 3 | 3 | 0.0000339311 |
| Oryza sativa Kitaake | Chr4 | 4 | CH_osak_62 | 6 | 8 | 0.000000000000692377 |
| Oryza sativa ssp. japonica | chr04 | 4 | CH_osa_115 | 5 | 14 | 0.0000000177328 |
| Oropetium thomaeum | Chromosome_6 | 4 | CH_oth_28 | 5 | 8 | 0.00000000153357 |
| Phyllostachys edulis | hic_scaffold_17 | 4 | CH_ped_404 | 3 | 4 | 0.000275902 |
| Phyllostachys edulis | hic_scaffold_24 | 4 | CH_ped_91 | 5 | 6 | 0.000000000473421 |
| Panicum hallii | Chr07 | 4 | CH_pha_54 | 6 | 11 | 0.0000000000076047 |
| Populus trichocarpa | Chr08 | 4 | CH_ptr_443 | 3 | 5 | 0.000533308 |
| Sorghum bicolor | Chr06 | 4 | CH_sbi_109 | 5 | 12 | 0.0000000141054 |
| Secale cereale | GWHASIY00000006 | 4 | CH_sce_112 | 6 | 13 | 0.000000000193821 |
| Secale cereale | GWHASIY00000007 | 4 | CH_sce_655 | 3 | 4 | 0.000308228 |
| Secale cereale | GWHASIY00000006 | 4 | CH_sce_656 | 3 | 4 | 0.000308228 |
| Sequoiadendron giganteum | chr1 | 4 | CH_sgi_494 | 4 | 4 | 0.0000000071018 |
| Setaria italica | scaffold_7 | 4 | CH_sit_76 | 6 | 11 | 0.00000000000756069 |
| Saccharum spontaneum | Chr5A | 4 | CH_ssp_121 | 6 | 12 | 0.000000000202531 |
| Saccharum spontaneum | Chr5C | 4 | CH_ssp_366 | 4 | 6 | 0.0000024908 |
| Saccharum spontaneum | Chr5B | 4 | CH_ssp_425 | 4 | 7 | 0.00000580641 |
| Saccharum spontaneum | Chr5D | 4 | CH_ssp_514 | 4 | 9 | 0.0000208639 |
| Setaria viridis | Chr_07 | 4 | CH_svi_70 | 6 | 11 | 0.0000000000035506 |
| Triticum aestivum | Chr5A | 4 | CH_tae_1177 | 3 | 4 | 0.000254916 |
| Triticum aestivum | Chr5B | 4 | CH_tae_1178 | 3 | 4 | 0.000254916 |
| Triticum aestivum | Chr5D | 4 | CH_tae_1179 | 3 | 4 | 0.000254916 |
| Triticum aestivum | Chr2B | 4 | CH_tae_369 | 5 | 8 | 0.00000000238706 |
| Triticum aestivum | Chr2A | 4 | CH_tae_370 | 5 | 8 | 0.00000000238706 |
| Triticum aestivum | Chr2D | 4 | CH_tae_435 | 5 | 10 | 0.0000000107272 |
| Triticum dicoccoides | 2B | 4 | CH_tdi_106 | 5 | 6 | 0.00000000011045 |
| Triticum dicoccoides | 2A | 4 | CH_tdi_118 | 5 | 7 | 0.000000000386333 |
| Triticum turgidum | chr2B | 4 | CH_ttu_217 | 4 | 5 | 0.0000000312362 |
| Triticum turgidum | chr5A | 4 | CH_ttu_527 | 3 | 4 | 0.000153661 |
| Triticum turgidum | chr5B | 4 | CH_ttu_528 | 3 | 4 | 0.000153661 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00006.1 | 4 | CH_zjn_173 | 3 | 6 | 0.000166637 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0005355 | glucose transmembrane transporter activity | 2 |
| GO:0005358 | high-affinity glucose:proton symporter activity | 4 |
| GO:0015148 | D-xylose transmembrane transporter activity | 8 |
| GO:0015229 | L-ascorbic acid transmembrane transporter activity | 2 |
| GO:0015284 | fructose uniporter activity | 2 |
| GO:0042900 | arabinose transmembrane transporter activity | 2 |
| GO:0055055 | D-glucose:proton symporter activity | 6 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |