Functional clusters
Information
- Type Gene Ontology
- Description ent-kaurene oxidation to kaurenoic acid
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aegilops tauschii | 7D | 3 | CH_ata_296 | 2 | 2 | 0.000147725 |
| Brachypodium distachyon | Bd1 | 3 | CH_bdi_73 | 3 | 4 | 0.0000000228173 |
| Calamus simplicifolius | scaffold505 | 3 | CH_calsi_25 | 4 | 5 | 0.00000000000453849 |
| Digitaria exilis | Dexi_CM05836_chrUA | 3 | CH_dex_522 | 2 | 2 | 0.000200521 |
| Digitaria exilis | Dexi_CM05836_chr04A | 3 | CH_dex_523 | 2 | 2 | 0.000200521 |
| Lolium perenne | Lp_chr7_0.1 | 3 | CH_lpe_304 | 2 | 2 | 0.0000964274 |
| Musa acuminata | chr06 | 3 | CH_mac_137 | 2 | 2 | 0.0000568182 |
| Marchantia polymorpha | scaffold_130 | 3 | CH_mpo_110 | 2 | 2 | 0.000331327 |
| Oryza alta | GWHAZTO00000006 | 3 | CH_oal_158 | 3 | 3 | 0.0000000121824 |
| Oryza alta | GWHAZTO00000018 | 3 | CH_oal_189 | 3 | 4 | 0.0000000487281 |
| Oryza brachyantha | 6 | 3 | CH_obr_11 | 5 | 5 | 9.55022e-17 |
| Oryza sativa ssp. indica | Chr6 | 3 | CH_osaindica_27 | 5 | 10 | 0.0000000000000134623 |
| Oryza sativa Kitaake | Chr6 | 3 | CH_osak_41 | 5 | 8 | 0.00000000000000421578 |
| Oryza sativa ssp. japonica | chr06 | 3 | CH_osa_15 | 6 | 10 | 1.94153e-18 |
| Panicum hallii | Chr04 | 3 | CH_pha_252 | 2 | 2 | 0.0000581108 |
| Physcomitrium patens | Chr20 | 3 | CH_ppa_92 | 2 | 2 | 0.0000612726 |
| Setaria italica | scaffold_4 | 3 | CH_sit_118 | 3 | 3 | 0.00000000505369 |
| Saccharum spontaneum | Chr8C | 3 | CH_ssp_343 | 3 | 6 | 0.00000143424 |
| Saccharum spontaneum | Chr8A | 3 | CH_ssp_426 | 3 | 9 | 0.00000602263 |
| Setaria viridis | Chr_04 | 3 | CH_svi_108 | 3 | 3 | 0.00000000408399 |
| Triticum dicoccoides | 7A | 3 | CH_tdi_624 | 2 | 2 | 0.000831181 |
| Zea mays B73 | 9 | 3 | CH_zma_191 | 2 | 2 | 0.0000511313 |
| Aegilops tauschii | 7D | 4 | CH_ata_296 | 2 | 2 | 0.000147725 |
| Brachypodium distachyon | Bd1 | 4 | CH_bdi_73 | 3 | 4 | 0.0000000228173 |
| Calamus simplicifolius | scaffold505 | 4 | CH_calsi_25 | 4 | 5 | 0.00000000000453849 |
| Digitaria exilis | Dexi_CM05836_chrUA | 4 | CH_dex_522 | 2 | 2 | 0.000200521 |
| Digitaria exilis | Dexi_CM05836_chr04A | 4 | CH_dex_523 | 2 | 2 | 0.000200521 |
| Lolium perenne | Lp_chr7_0.1 | 4 | CH_lpe_304 | 2 | 2 | 0.0000964274 |
| Musa acuminata | chr06 | 4 | CH_mac_137 | 2 | 2 | 0.0000568182 |
| Marchantia polymorpha | scaffold_130 | 4 | CH_mpo_110 | 2 | 2 | 0.000331327 |
| Oryza alta | GWHAZTO00000006 | 4 | CH_oal_158 | 3 | 3 | 0.0000000121824 |
| Oryza alta | GWHAZTO00000018 | 4 | CH_oal_189 | 3 | 4 | 0.0000000487281 |
| Oryza brachyantha | 6 | 4 | CH_obr_11 | 5 | 5 | 9.55022e-17 |
| Oryza sativa ssp. indica | Chr6 | 4 | CH_osaindica_27 | 5 | 10 | 0.0000000000000134623 |
| Oryza sativa Kitaake | Chr6 | 4 | CH_osak_41 | 5 | 8 | 0.00000000000000421578 |
| Oryza sativa ssp. japonica | chr06 | 4 | CH_osa_15 | 6 | 10 | 1.94153e-18 |
| Panicum hallii | Chr04 | 4 | CH_pha_252 | 2 | 2 | 0.0000581108 |
| Physcomitrium patens | Chr20 | 4 | CH_ppa_92 | 2 | 2 | 0.0000612726 |
| Setaria italica | scaffold_4 | 4 | CH_sit_118 | 3 | 3 | 0.00000000505369 |
| Saccharum spontaneum | Chr8C | 4 | CH_ssp_343 | 3 | 6 | 0.00000143424 |
| Saccharum spontaneum | Chr8A | 4 | CH_ssp_426 | 3 | 9 | 0.00000602263 |
| Setaria viridis | Chr_04 | 4 | CH_svi_108 | 3 | 3 | 0.00000000408399 |
| Triticum dicoccoides | 7A | 4 | CH_tdi_624 | 2 | 2 | 0.000831181 |
| Zea mays B73 | 9 | 4 | CH_zma_191 | 2 | 2 | 0.0000511313 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |