Functional clusters

Information

  • Type Gene Ontology
  • Description phenylpropanoid metabolic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cenchrus purpureus GWHAORA00000003 3 CH_cpu_763 4 5 0.000208992
Musa acuminata chr06 3 CH_mac_121 8 49 0.0000333785
Phyllostachys edulis hic_scaffold_11 3 CH_ped_183 6 11 0.000000738571
Cenchrus purpureus GWHAORA00000003 4 CH_cpu_763 4 5 0.000208992
Musa acuminata chr06 4 CH_mac_121 8 49 0.0000333785
Phyllostachys edulis hic_scaffold_11 4 CH_ped_183 6 11 0.000000738571

Available child term results

Ontology identifier Description Number of clusters
GO:0009807 lignan biosynthetic process 8
GO:0009808 lignin metabolic process 2
GO:0009809 lignin biosynthetic process 14
GO:0010023 proanthocyanidin biosynthetic process 12
GO:0010345 suberin biosynthetic process 2
GO:0090431 alkyl caffeate ester biosynthetic process 4
GO:0106146 sideretin biosynthesis 12
GO:0106147 fraxetin biosynthesis 2
GO:1901430 positive regulation of syringal lignin biosynthetic process 8
GO:1901599 (-)-pinoresinol biosynthetic process 60
GO:2000029 regulation of proanthocyanidin biosynthetic process 6
GO:2000762 regulation of phenylpropanoid metabolic process 8

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001