Functional clusters

Information

  • Type Gene Ontology
  • Description nucleoside metabolic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brachypodium distachyon Bd1 3 CH_bdi_208 3 3 0.0000654876
Eragrostis curvula 3 3 CH_ecu_405 5 19 0.000000892175
Populus trichocarpa Chr13 3 CH_ptr_107 6 7 0.00000000000508137
Populus trichocarpa Chr08 3 CH_ptr_373 3 3 0.000171491
Populus trichocarpa Chr13 3 CH_ptr_471 3 4 0.000685097
Sequoiadendron giganteum chr8 3 CH_sgi_116 10 16 5.47818e-21
Sequoiadendron giganteum chr8 3 CH_sgi_778 5 19 0.00000242099
Solanum lycopersicum SL4.0ch08 3 CH_sly_570 3 5 0.000950103
Saccharum spontaneum Chr3B 3 CH_ssp_347 4 5 0.00000178743
Brachypodium distachyon Bd1 4 CH_bdi_208 3 3 0.0000654876
Eragrostis curvula 3 4 CH_ecu_405 5 19 0.000000892175
Populus trichocarpa Chr13 4 CH_ptr_107 6 7 0.00000000000508137
Populus trichocarpa Chr08 4 CH_ptr_373 3 3 0.000171491
Populus trichocarpa Chr13 4 CH_ptr_471 3 4 0.000685097
Sequoiadendron giganteum chr8 4 CH_sgi_116 10 16 5.47818e-21
Sequoiadendron giganteum chr8 4 CH_sgi_778 5 19 0.00000242099
Solanum lycopersicum SL4.0ch08 4 CH_sly_570 3 5 0.000950103
Saccharum spontaneum Chr3B 4 CH_ssp_347 4 5 0.00000178743

Available child term results

Ontology identifier Description Number of clusters
GO:0006148 inosine catabolic process 4
GO:0006154 adenosine catabolic process 60
GO:0006169 adenosine salvage 2
GO:0006218 uridine catabolic process 8
GO:0006557 S-adenosylmethioninamine biosynthetic process 2
GO:0009972 cytidine deamination 2
GO:0046104 thymidine metabolic process 2
GO:0046109 uridine biosynthetic process 4
GO:0080180 2-methylguanosine metabolic process 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001