Functional clusters
Information
- Type Gene Ontology
- Description negative regulation of cell population proliferation
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr1 | 3 | CH_asa_204 | 5 | 18 | 0.00000007224 |
| Allium sativum | chr5 | 3 | CH_asa_603 | 3 | 5 | 0.000189847 |
| Aegilops tauschii | 1D | 3 | CH_ata_25 | 8 | 19 | 0.0000000000000024038 |
| Brachypodium distachyon | Bd2 | 3 | CH_bdi_209 | 3 | 3 | 0.0000654876 |
| Eragrostis curvula | 3 | 3 | CH_ecu_409 | 5 | 26 | 0.00000093633 |
| Glycine max | Gm05 | 3 | CH_gma_463 | 3 | 3 | 0.00033895 |
| Lolium perenne | Lp_chr5_0 | 3 | CH_lpe_174 | 4 | 9 | 0.000000924507 |
| Miscanthus sinensis | Chr04 | 3 | CH_msi_148 | 5 | 9 | 0.0000000213607 |
| Miscanthus sinensis | Chr05 | 3 | CH_msi_177 | 4 | 4 | 0.000000142861 |
| Oryza brachyantha | 3 | 3 | CH_obr_184 | 3 | 3 | 0.0000528808 |
| Oryza brachyantha | 9 | 3 | CH_obr_185 | 3 | 4 | 0.0000528808 |
| Oryza sativa Kitaake | Chr1 | 3 | CH_osak_208 | 4 | 6 | 0.00000119341 |
| Oryza sativa Kitaake | Chr9 | 3 | CH_osak_380 | 3 | 4 | 0.000269491 |
| Oryza sativa ssp. japonica | chr01 | 3 | CH_osa_150 | 4 | 5 | 0.000000247125 |
| Oryza sativa ssp. japonica | chr09 | 3 | CH_osa_265 | 3 | 3 | 0.0000480302 |
| Oropetium thomaeum | Chromosome_2 | 3 | CH_oth_173 | 3 | 4 | 0.000300089 |
| Oropetium thomaeum | Chromosome_3 | 3 | CH_oth_227 | 3 | 5 | 0.000749455 |
| Panicum hallii | Chr05 | 3 | CH_pha_149 | 4 | 5 | 0.000000524521 |
| Panicum hallii | Chr02 | 3 | CH_pha_278 | 3 | 3 | 0.0000821362 |
| Populus trichocarpa | Chr10 | 3 | CH_ptr_375 | 3 | 3 | 0.000171491 |
| Populus trichocarpa | Chr08 | 3 | CH_ptr_376 | 3 | 3 | 0.000171491 |
| Sorghum bicolor | Chr03 | 3 | CH_sbi_160 | 4 | 5 | 0.00000049383 |
| Sorghum bicolor | Chr02 | 3 | CH_sbi_83 | 5 | 6 | 0.00000000073015 |
| Sequoiadendron giganteum | chr2 | 3 | CH_sgi_221 | 7 | 10 | 0.0000000000000168538 |
| Setaria italica | scaffold_2 | 3 | CH_sit_161 | 4 | 4 | 0.000000146617 |
| Setaria italica | scaffold_5 | 3 | CH_sit_323 | 3 | 3 | 0.000105243 |
| Setaria italica | scaffold_5 | 3 | CH_sit_88 | 5 | 5 | 0.000000000200005 |
| Selaginella moellendorffii | scaffold_6 | 3 | CH_smo_178 | 3 | 6 | 0.000763013 |
| Spirodela polyrhiza | pseudo20 | 3 | CH_spo_55 | 5 | 8 | 0.00000000643907 |
| Setaria viridis | Chr_02 | 3 | CH_svi_112 | 5 | 8 | 0.00000000476284 |
| Setaria viridis | Chr_05 | 3 | CH_svi_93 | 5 | 6 | 0.000000000511264 |
| Triticum aestivum | Chr1D | 3 | CH_tae_1076 | 3 | 3 | 0.000122901 |
| Triticum aestivum | Chr3A | 3 | CH_tae_1077 | 3 | 3 | 0.000122901 |
| Triticum aestivum | Chr5D | 3 | CH_tae_1298 | 3 | 4 | 0.000491219 |
| Triticum aestivum | Chr5B | 3 | CH_tae_546 | 4 | 4 | 0.000000126451 |
| Triticum dicoccoides | 1A | 3 | CH_tdi_13 | 9 | 12 | 1.46949e-19 |
| Triticum dicoccoides | 5A | 3 | CH_tdi_201 | 4 | 4 | 0.000000209749 |
| Triticum dicoccoides | 1B | 3 | CH_tdi_27 | 9 | 19 | 6.1226e-17 |
| Triticum dicoccoides | 5B | 3 | CH_tdi_472 | 3 | 3 | 0.000160582 |
| Allium sativum | chr1 | 4 | CH_asa_204 | 5 | 18 | 0.00000007224 |
| Allium sativum | chr5 | 4 | CH_asa_603 | 3 | 5 | 0.000189847 |
| Aegilops tauschii | 1D | 4 | CH_ata_25 | 8 | 19 | 0.0000000000000024038 |
| Brachypodium distachyon | Bd2 | 4 | CH_bdi_209 | 3 | 3 | 0.0000654876 |
| Eragrostis curvula | 3 | 4 | CH_ecu_409 | 5 | 26 | 0.00000093633 |
| Glycine max | Gm05 | 4 | CH_gma_463 | 3 | 3 | 0.00033895 |
| Lolium perenne | Lp_chr5_0 | 4 | CH_lpe_174 | 4 | 9 | 0.000000924507 |
| Miscanthus sinensis | Chr04 | 4 | CH_msi_148 | 5 | 9 | 0.0000000213607 |
| Miscanthus sinensis | Chr05 | 4 | CH_msi_177 | 4 | 4 | 0.000000142861 |
| Oryza brachyantha | 3 | 4 | CH_obr_184 | 3 | 3 | 0.0000528808 |
| Oryza brachyantha | 9 | 4 | CH_obr_185 | 3 | 4 | 0.0000528808 |
| Oryza sativa Kitaake | Chr1 | 4 | CH_osak_208 | 4 | 6 | 0.00000119341 |
| Oryza sativa Kitaake | Chr9 | 4 | CH_osak_380 | 3 | 4 | 0.000269491 |
| Oryza sativa ssp. japonica | chr01 | 4 | CH_osa_150 | 4 | 5 | 0.000000247125 |
| Oryza sativa ssp. japonica | chr09 | 4 | CH_osa_265 | 3 | 3 | 0.0000480302 |
| Oropetium thomaeum | Chromosome_2 | 4 | CH_oth_173 | 3 | 4 | 0.000300089 |
| Oropetium thomaeum | Chromosome_3 | 4 | CH_oth_227 | 3 | 5 | 0.000749455 |
| Panicum hallii | Chr05 | 4 | CH_pha_149 | 4 | 5 | 0.000000524521 |
| Panicum hallii | Chr02 | 4 | CH_pha_278 | 3 | 3 | 0.0000821362 |
| Populus trichocarpa | Chr10 | 4 | CH_ptr_375 | 3 | 3 | 0.000171491 |
| Populus trichocarpa | Chr08 | 4 | CH_ptr_376 | 3 | 3 | 0.000171491 |
| Sorghum bicolor | Chr03 | 4 | CH_sbi_160 | 4 | 5 | 0.00000049383 |
| Sorghum bicolor | Chr02 | 4 | CH_sbi_83 | 5 | 6 | 0.00000000073015 |
| Sequoiadendron giganteum | chr2 | 4 | CH_sgi_221 | 7 | 10 | 0.0000000000000168538 |
| Setaria italica | scaffold_2 | 4 | CH_sit_161 | 4 | 4 | 0.000000146617 |
| Setaria italica | scaffold_5 | 4 | CH_sit_323 | 3 | 3 | 0.000105243 |
| Setaria italica | scaffold_5 | 4 | CH_sit_88 | 5 | 5 | 0.000000000200005 |
| Selaginella moellendorffii | scaffold_6 | 4 | CH_smo_178 | 3 | 6 | 0.000763013 |
| Spirodela polyrhiza | pseudo20 | 4 | CH_spo_55 | 5 | 8 | 0.00000000643907 |
| Setaria viridis | Chr_02 | 4 | CH_svi_112 | 5 | 8 | 0.00000000476284 |
| Setaria viridis | Chr_05 | 4 | CH_svi_93 | 5 | 6 | 0.000000000511264 |
| Triticum aestivum | Chr1D | 4 | CH_tae_1076 | 3 | 3 | 0.000122901 |
| Triticum aestivum | Chr3A | 4 | CH_tae_1077 | 3 | 3 | 0.000122901 |
| Triticum aestivum | Chr5D | 4 | CH_tae_1298 | 3 | 4 | 0.000491219 |
| Triticum aestivum | Chr5B | 4 | CH_tae_546 | 4 | 4 | 0.000000126451 |
| Triticum dicoccoides | 1A | 4 | CH_tdi_13 | 9 | 12 | 1.46949e-19 |
| Triticum dicoccoides | 5A | 4 | CH_tdi_201 | 4 | 4 | 0.000000209749 |
| Triticum dicoccoides | 1B | 4 | CH_tdi_27 | 9 | 19 | 6.1226e-17 |
| Triticum dicoccoides | 5B | 4 | CH_tdi_472 | 3 | 3 | 0.000160582 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |