Functional clusters

Information

  • Type Gene Ontology
  • Description ion channel activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr5 3 CH_asa_729 4 8 0.000522866
Eragrostis curvula 1 3 CH_ecu_438 6 22 0.00000237374
Panicum hallii Chr04 3 CH_pha_286 4 7 0.000109622
Sorghum bicolor Chr10 3 CH_sbi_240 4 5 0.0000231833
Saccharum spontaneum Chr8B 3 CH_ssp_359 5 7 0.0000021251
Triticum aestivum Chr6B 3 CH_tae_1388 5 18 0.000728934
Triticum dicoccoides 7A 3 CH_tdi_400 4 5 0.0000641858
Triticum turgidum chr6B 3 CH_ttu_529 5 14 0.000162962
Allium sativum chr5 4 CH_asa_729 4 8 0.000522866
Eragrostis curvula 1 4 CH_ecu_438 6 22 0.00000237374
Panicum hallii Chr04 4 CH_pha_286 4 7 0.000109622
Sorghum bicolor Chr10 4 CH_sbi_240 4 5 0.0000231833
Saccharum spontaneum Chr8B 4 CH_ssp_359 5 7 0.0000021251
Triticum aestivum Chr6B 4 CH_tae_1388 5 18 0.000728934
Triticum dicoccoides 7A 4 CH_tdi_400 4 5 0.0000641858
Triticum turgidum chr6B 4 CH_ttu_529 5 14 0.000162962

Available child term results

Ontology identifier Description Number of clusters
GO:0004970 ionotropic glutamate receptor activity 2
GO:0005223 intracellular cGMP-activated cation channel activity 2
GO:0005227 calcium activated cation channel activity 10
GO:0005230 extracellular ligand-gated ion channel activity 2
GO:0005245 voltage-gated calcium channel activity 6
GO:0005247 voltage-gated chloride channel activity 10
GO:0005249 voltage-gated potassium channel activity 4
GO:0005254 chloride channel activity 6
GO:0005262 calcium channel activity 2
GO:0005267 potassium channel activity 2
GO:0005272 sodium channel activity 12
GO:0008308 voltage-gated anion channel activity 38
GO:0008381 mechanosensitive ion channel activity 4
GO:0015269 calcium-activated potassium channel activity 10
GO:0015271 outward rectifier potassium channel activity 4
GO:0015276 ligand-gated ion channel activity 182
GO:0022841 potassium ion leak channel activity 6
GO:0022843 voltage-gated cation channel activity 2
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism 2
GO:0099604 ligand-gated calcium channel activity 10

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001