Functional clusters
Information
- Type Gene Ontology
- Description cysteine synthase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brachypodium distachyon | Bd1 | 3 | CH_bdi_99 | 3 | 3 | 0.000000319452 |
| Cenchrus purpureus | GWHAORA00000011 | 3 | CH_cpu_362 | 3 | 3 | 0.00000080277 |
| Cenchrus purpureus | GWHAORA00000004 | 3 | CH_cpu_420 | 3 | 4 | 0.00000321055 |
| Miscanthus sinensis | Chr18 | 3 | CH_msi_277 | 3 | 5 | 0.00000707377 |
| Oryza sativa Kitaake | Chr6 | 3 | CH_osak_227 | 3 | 4 | 0.00000313587 |
| Oryza sativa ssp. japonica | chr06 | 3 | CH_osa_163 | 3 | 3 | 0.000000690329 |
| Panicum hallii | Chr04 | 3 | CH_pha_138 | 3 | 3 | 0.000000283665 |
| Populus trichocarpa | Chr05 | 3 | CH_ptr_87 | 5 | 5 | 0.0000000000000663097 |
| Sorghum bicolor | Chr10 | 3 | CH_sbi_187 | 3 | 4 | 0.00000173452 |
| Setaria italica | scaffold_4 | 3 | CH_sit_243 | 3 | 7 | 0.0000148484 |
| Setaria viridis | Chr_04 | 3 | CH_svi_224 | 3 | 5 | 0.00000228647 |
| Zea mays B73 | 9 | 3 | CH_zma_82 | 4 | 15 | 0.0000000601396 |
| Brachypodium distachyon | Bd1 | 4 | CH_bdi_99 | 3 | 3 | 0.000000319452 |
| Cenchrus purpureus | GWHAORA00000011 | 4 | CH_cpu_362 | 3 | 3 | 0.00000080277 |
| Cenchrus purpureus | GWHAORA00000004 | 4 | CH_cpu_420 | 3 | 4 | 0.00000321055 |
| Miscanthus sinensis | Chr18 | 4 | CH_msi_277 | 3 | 5 | 0.00000707377 |
| Oryza sativa Kitaake | Chr6 | 4 | CH_osak_227 | 3 | 4 | 0.00000313587 |
| Oryza sativa ssp. japonica | chr06 | 4 | CH_osa_163 | 3 | 3 | 0.000000690329 |
| Panicum hallii | Chr04 | 4 | CH_pha_138 | 3 | 3 | 0.000000283665 |
| Populus trichocarpa | Chr05 | 4 | CH_ptr_87 | 5 | 5 | 0.0000000000000663097 |
| Sorghum bicolor | Chr10 | 4 | CH_sbi_187 | 3 | 4 | 0.00000173452 |
| Setaria italica | scaffold_4 | 4 | CH_sit_243 | 3 | 7 | 0.0000148484 |
| Setaria viridis | Chr_04 | 4 | CH_svi_224 | 3 | 5 | 0.00000228647 |
| Zea mays B73 | 9 | 4 | CH_zma_82 | 4 | 15 | 0.0000000601396 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |