Functional clusters

Information

  • Type MapMan
  • Description Secondary metabolism.phenolics.flavonoid biosynthesis.flavonol glycosides.flavonol-3-O-glycoside rhamnosyltransferase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brachypodium distachyon Bd3 1 CH_bdi_328 2 2 0.000616675
Dioscorea dumetorum contig562 1 CH_ddu_286 2 5 0.000690822
Digitaria exilis Dexi_CM05836_chr07A 1 CH_dex_732 2 2 0.000935766
Digitaria exilis Dexi_CM05836_chr07B 1 CH_dex_733 2 2 0.000935766
Elaeis guineensis p5_sc00111 1 CH_egu_79 3 8 0.00000301426
Magnolia biondii Chr14 1 CH_mbi_245 3 13 0.00000404585
Miscanthus sinensis Chr19 1 CH_msi_316 3 20 0.0000354265
Oryza alta GWHAZTO00000020 1 CH_oal_237 3 6 0.00000146161
Oryza alta GWHAZTO00000006 1 CH_oal_344 3 16 0.0000408994
Oryza alta GWHAZTO00000008 1 CH_oal_816 2 2 0.00090681
Oryza sativa Kitaake Chr6 1 CH_osak_25 6 6 1.06801e-18
Oryza sativa ssp. japonica chr06 1 CH_osa_396 2 4 0.000950537
Phyllostachys edulis hic_scaffold_22 1 CH_ped_107 3 3 0.0000000249036
Panicum hallii Chr07 1 CH_pha_313 2 2 0.000174332
Setaria italica scaffold_6 1 CH_sit_442 2 2 0.000580434
Setaria viridis Chr_06 1 CH_svi_412 2 2 0.000313071
Brachypodium distachyon Bd3 2 CH_bdi_328 2 2 0.000616675
Dioscorea dumetorum contig562 2 CH_ddu_286 2 5 0.000690822
Digitaria exilis Dexi_CM05836_chr07A 2 CH_dex_732 2 2 0.000935766
Digitaria exilis Dexi_CM05836_chr07B 2 CH_dex_733 2 2 0.000935766
Elaeis guineensis p5_sc00111 2 CH_egu_79 3 8 0.00000301426
Magnolia biondii Chr14 2 CH_mbi_245 3 13 0.00000404585
Miscanthus sinensis Chr19 2 CH_msi_316 3 20 0.0000354265
Oryza alta GWHAZTO00000020 2 CH_oal_237 3 6 0.00000146161
Oryza alta GWHAZTO00000006 2 CH_oal_344 3 16 0.0000408994
Oryza alta GWHAZTO00000008 2 CH_oal_816 2 2 0.00090681
Oryza sativa Kitaake Chr6 2 CH_osak_25 6 6 1.06801e-18
Oryza sativa ssp. japonica chr06 2 CH_osa_396 2 4 0.000950537
Phyllostachys edulis hic_scaffold_22 2 CH_ped_107 3 3 0.0000000249036
Panicum hallii Chr07 2 CH_pha_313 2 2 0.000174332
Setaria italica scaffold_6 2 CH_sit_442 2 2 0.000580434
Setaria viridis Chr_06 2 CH_svi_412 2 2 0.000313071

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001