Functional clusters

Information

  • Type MapMan
  • Description Coenzyme metabolism.tetrapyrrol biosynthesis.heme biosynthesis and modification.heme oxygenase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cenchrus purpureus GWHAORA00000012 1 CH_cpu_308 3 4 0.00000020068
Cenchrus purpureus GWHAORA00000006 1 CH_cpu_846 2 2 0.00064919
Eragrostis curvula 3 1 CH_ecu_272 3 4 0.0000000901956
Hordeum vulgare chr7H 1 CH_hvu_451 2 3 0.00073047
Lolium perenne Lp_chr7_0.1 1 CH_lpe_394 2 4 0.000578533
Miscanthus sinensis Chr19 1 CH_msi_557 2 2 0.000482983
Panicum hallii Chr04 1 CH_pha_103 3 3 0.0000000202618
Sorghum bicolor Chr10 1 CH_sbi_351 2 2 0.000176005
Setaria italica scaffold_4 1 CH_sit_366 2 2 0.00017413
Setaria viridis Chr_04 1 CH_svi_431 2 3 0.000469586
Cenchrus purpureus GWHAORA00000012 2 CH_cpu_308 3 4 0.00000020068
Cenchrus purpureus GWHAORA00000006 2 CH_cpu_846 2 2 0.00064919
Eragrostis curvula 3 2 CH_ecu_272 3 4 0.0000000901956
Hordeum vulgare chr7H 2 CH_hvu_451 2 3 0.00073047
Lolium perenne Lp_chr7_0.1 2 CH_lpe_394 2 4 0.000578533
Miscanthus sinensis Chr19 2 CH_msi_557 2 2 0.000482983
Panicum hallii Chr04 2 CH_pha_103 3 3 0.0000000202618
Sorghum bicolor Chr10 2 CH_sbi_351 2 2 0.000176005
Setaria italica scaffold_4 2 CH_sit_366 2 2 0.00017413
Setaria viridis Chr_04 2 CH_svi_431 2 3 0.000469586

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001