Functional clusters
Information
- Type MapMan
- Description Nucleotide metabolism.purines.extracellular ATP.nucleoside hydrolase (NSH3)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis thaliana | Chr5 | 1 | CH_ath_113 | 3 | 7 | 0.0000000430889 |
| Ceratophyllum demersum | 3 | 1 | CH_cde_119 | 2 | 2 | 0.0000789796 |
| Cenchrus purpureus | GWHAORA00000008 | 1 | CH_cpu_248 | 4 | 15 | 0.0000000253818 |
| Cenchrus purpureus | GWHAORA00000001 | 1 | CH_cpu_303 | 4 | 23 | 0.000000164538 |
| Digitaria exilis | Dexi_CM05836_chr03B | 1 | CH_dex_127 | 4 | 15 | 0.00000000534688 |
| Digitaria exilis | Dexi_CM05836_chr03A | 1 | CH_dex_385 | 3 | 17 | 0.0000398371 |
| Eragrostis curvula | 7 | 1 | CH_ecu_228 | 3 | 5 | 0.0000000225491 |
| Glycine max | Gm13 | 1 | CH_gma_528 | 2 | 2 | 0.000379557 |
| Glycine max | Gm07 | 1 | CH_gma_529 | 2 | 2 | 0.000379557 |
| Hordeum vulgare | chr1H | 1 | CH_hvu_95 | 4 | 23 | 0.0000000017751 |
| Lolium perenne | Lp_chr1_0 | 1 | CH_lpe_188 | 3 | 37 | 0.0000120348 |
| Miscanthus sinensis | Chr16 | 1 | CH_msi_122 | 3 | 3 | 0.0000000155517 |
| Oryza alta | GWHAZTO00000005 | 1 | CH_oal_129 | 3 | 4 | 0.0000000243642 |
| Oryza alta | GWHAZTO00000017 | 1 | CH_oal_749 | 2 | 3 | 0.000604522 |
| Oryza brachyantha | 5 | 1 | CH_obr_221 | 2 | 3 | 0.000179195 |
| Oryza sativa ssp. indica | Chr5 | 1 | CH_osaindica_230 | 2 | 2 | 0.0000516609 |
| Oryza sativa Kitaake | Chr5 | 1 | CH_osak_310 | 2 | 2 | 0.0000562857 |
| Oropetium thomaeum | Chromosome_5 | 1 | CH_oth_62 | 3 | 5 | 0.0000000760058 |
| Phyllostachys edulis | hic_scaffold_7 | 1 | CH_ped_220 | 3 | 17 | 0.0000067704 |
| Panicum hallii | Chr03 | 1 | CH_pha_214 | 3 | 25 | 0.0000116431 |
| Populus trichocarpa | Chr08 | 1 | CH_ptr_319 | 2 | 2 | 0.0000578001 |
| Sorghum bicolor | Chr09 | 1 | CH_sbi_123 | 3 | 5 | 0.0000000516279 |
| Secale cereale | GWHASIY00000001 | 1 | CH_sce_135 | 4 | 20 | 0.00000000137136 |
| Sequoiadendron giganteum | chr11 | 1 | CH_sgi_1042 | 2 | 3 | 0.000146142 |
| Setaria italica | scaffold_3 | 1 | CH_sit_115 | 4 | 20 | 0.000000014201 |
| Solanum lycopersicum | SL4.0ch01 | 1 | CH_sly_57 | 5 | 15 | 0.000000000000267265 |
| Saccharum spontaneum | Chr7B | 1 | CH_ssp_13 | 7 | 17 | 9.31948e-20 |
| Setaria viridis | Chr_03 | 1 | CH_svi_242 | 3 | 20 | 0.0000186086 |
| Triticum aestivum | Chr1D | 1 | CH_tae_452 | 4 | 17 | 0.0000000154121 |
| Triticum aestivum | Chr1B | 1 | CH_tae_513 | 3 | 3 | 0.0000000866104 |
| Triticum aestivum | Chr1A | 1 | CH_tae_982 | 3 | 16 | 0.0000484606 |
| Triticum dicoccoides | 1B | 1 | CH_tdi_177 | 4 | 31 | 0.0000000863092 |
| Triticum dicoccoides | 1A | 1 | CH_tdi_340 | 3 | 15 | 0.000021035 |
| Triticum turgidum | chr1B | 1 | CH_ttu_211 | 3 | 3 | 0.0000000512815 |
| Triticum turgidum | chr1A | 1 | CH_ttu_453 | 3 | 17 | 0.0000348409 |
| Arabidopsis thaliana | Chr5 | 2 | CH_ath_113 | 3 | 7 | 0.0000000430889 |
| Ceratophyllum demersum | 3 | 2 | CH_cde_119 | 2 | 2 | 0.0000789796 |
| Cenchrus purpureus | GWHAORA00000008 | 2 | CH_cpu_248 | 4 | 15 | 0.0000000253818 |
| Cenchrus purpureus | GWHAORA00000001 | 2 | CH_cpu_303 | 4 | 23 | 0.000000164538 |
| Digitaria exilis | Dexi_CM05836_chr03B | 2 | CH_dex_127 | 4 | 15 | 0.00000000534688 |
| Digitaria exilis | Dexi_CM05836_chr03A | 2 | CH_dex_385 | 3 | 17 | 0.0000398371 |
| Eragrostis curvula | 7 | 2 | CH_ecu_228 | 3 | 5 | 0.0000000225491 |
| Glycine max | Gm13 | 2 | CH_gma_528 | 2 | 2 | 0.000379557 |
| Glycine max | Gm07 | 2 | CH_gma_529 | 2 | 2 | 0.000379557 |
| Hordeum vulgare | chr1H | 2 | CH_hvu_95 | 4 | 23 | 0.0000000017751 |
| Lolium perenne | Lp_chr1_0 | 2 | CH_lpe_188 | 3 | 37 | 0.0000120348 |
| Miscanthus sinensis | Chr16 | 2 | CH_msi_122 | 3 | 3 | 0.0000000155517 |
| Oryza alta | GWHAZTO00000005 | 2 | CH_oal_129 | 3 | 4 | 0.0000000243642 |
| Oryza alta | GWHAZTO00000017 | 2 | CH_oal_749 | 2 | 3 | 0.000604522 |
| Oryza brachyantha | 5 | 2 | CH_obr_221 | 2 | 3 | 0.000179195 |
| Oryza sativa ssp. indica | Chr5 | 2 | CH_osaindica_230 | 2 | 2 | 0.0000516609 |
| Oryza sativa Kitaake | Chr5 | 2 | CH_osak_310 | 2 | 2 | 0.0000562857 |
| Oropetium thomaeum | Chromosome_5 | 2 | CH_oth_62 | 3 | 5 | 0.0000000760058 |
| Phyllostachys edulis | hic_scaffold_7 | 2 | CH_ped_220 | 3 | 17 | 0.0000067704 |
| Panicum hallii | Chr03 | 2 | CH_pha_214 | 3 | 25 | 0.0000116431 |
| Populus trichocarpa | Chr08 | 2 | CH_ptr_319 | 2 | 2 | 0.0000578001 |
| Sorghum bicolor | Chr09 | 2 | CH_sbi_123 | 3 | 5 | 0.0000000516279 |
| Secale cereale | GWHASIY00000001 | 2 | CH_sce_135 | 4 | 20 | 0.00000000137136 |
| Sequoiadendron giganteum | chr11 | 2 | CH_sgi_1042 | 2 | 3 | 0.000146142 |
| Setaria italica | scaffold_3 | 2 | CH_sit_115 | 4 | 20 | 0.000000014201 |
| Solanum lycopersicum | SL4.0ch01 | 2 | CH_sly_57 | 5 | 15 | 0.000000000000267265 |
| Saccharum spontaneum | Chr7B | 2 | CH_ssp_13 | 7 | 17 | 9.31948e-20 |
| Setaria viridis | Chr_03 | 2 | CH_svi_242 | 3 | 20 | 0.0000186086 |
| Triticum aestivum | Chr1D | 2 | CH_tae_452 | 4 | 17 | 0.0000000154121 |
| Triticum aestivum | Chr1B | 2 | CH_tae_513 | 3 | 3 | 0.0000000866104 |
| Triticum aestivum | Chr1A | 2 | CH_tae_982 | 3 | 16 | 0.0000484606 |
| Triticum dicoccoides | 1B | 2 | CH_tdi_177 | 4 | 31 | 0.0000000863092 |
| Triticum dicoccoides | 1A | 2 | CH_tdi_340 | 3 | 15 | 0.000021035 |
| Triticum turgidum | chr1B | 2 | CH_ttu_211 | 3 | 3 | 0.0000000512815 |
| Triticum turgidum | chr1A | 2 | CH_ttu_453 | 3 | 17 | 0.0000348409 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |