Functional clusters
Information
- Type MapMan
- Description Enzyme classification.EC_2 transferases.EC_2.8 transferase transferring sulfur-containing group
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr4 | 1 | CH_asa_10 | 10 | 19 | 2.36161e-23 |
| Allium sativum | chr1 | 1 | CH_asa_49 | 7 | 16 | 0.0000000000000204367 |
| Allium sativum | chr6 | 1 | CH_asa_666 | 3 | 6 | 0.000294465 |
| Aegilops tauschii | 3D | 1 | CH_ata_209 | 3 | 4 | 0.0000629091 |
| Amborella trichopoda | AmTr_v1.0_scaffold00065 | 1 | CH_atr_14 | 7 | 10 | 2.85065e-19 |
| Brachypodium distachyon | Bd2 | 1 | CH_bdi_346 | 3 | 9 | 0.000846114 |
| Calamus simplicifolius | scaffold144 | 1 | CH_calsi_108 | 4 | 5 | 0.00000192275 |
| Calamus simplicifolius | scaffold525 | 1 | CH_calsi_12 | 7 | 10 | 0.000000000000259019 |
| Calamus simplicifolius | scaffold147 | 1 | CH_calsi_142 | 4 | 9 | 0.0000481665 |
| Calamus simplicifolius | scaffold508 | 1 | CH_calsi_2 | 9 | 12 | 1.36498e-18 |
| Calamus simplicifolius | scaffold117 | 1 | CH_calsi_256 | 3 | 3 | 0.000208596 |
| Calamus simplicifolius | scaffold665 | 1 | CH_calsi_336 | 3 | 4 | 0.000833201 |
| Calamus simplicifolius | scaffold1122 | 1 | CH_calsi_5 | 9 | 19 | 5.67106e-16 |
| Calamus simplicifolius | scaffold129 | 1 | CH_calsi_84 | 4 | 4 | 0.000000385122 |
| Chara braunii | BFEA01000006 | 1 | CH_cbr_37 | 3 | 9 | 0.00000260654 |
| Cenchrus purpureus | GWHAORA00000007 | 1 | CH_cpu_194 | 5 | 6 | 0.00000000151709 |
| Cenchrus purpureus | GWHAORA00000001 | 1 | CH_cpu_373 | 5 | 16 | 0.00000109266 |
| Cenchrus purpureus | GWHAORA00000007 | 1 | CH_cpu_419 | 4 | 6 | 0.00000295318 |
| Cenchrus purpureus | GWHAORA00000007 | 1 | CH_cpu_654 | 3 | 3 | 0.000151946 |
| Cenchrus purpureus | GWHAORA00000003 | 1 | CH_cpu_655 | 3 | 3 | 0.000151946 |
| Cenchrus purpureus | GWHAORA00000003 | 1 | CH_cpu_656 | 3 | 3 | 0.000151946 |
| Cenchrus purpureus | GWHAORA00000010 | 1 | CH_cpu_715 | 5 | 44 | 0.000263634 |
| Dioscorea dumetorum | contig199 | 1 | CH_ddu_22 | 6 | 11 | 0.000000000000130869 |
| Dioscorea dumetorum | contig764 | 1 | CH_ddu_25 | 5 | 5 | 0.000000000000746586 |
| Dioscorea dumetorum | contig208 | 1 | CH_ddu_36 | 5 | 8 | 0.0000000000417648 |
| Digitaria exilis | Dexi_CM05836_chr05A | 1 | CH_dex_139 | 4 | 4 | 0.000000011341 |
| Digitaria exilis | Dexi_CM05836_chr02A | 1 | CH_dex_228 | 4 | 7 | 0.000000396327 |
| Digitaria exilis | Dexi_CM05836_chr05A | 1 | CH_dex_347 | 3 | 3 | 0.0000178597 |
| Digitaria exilis | Dexi_CM05836_chr06B | 1 | CH_dex_348 | 3 | 3 | 0.0000178597 |
| Digitaria exilis | Dexi_CM05836_chr07B | 1 | CH_dex_349 | 3 | 3 | 0.0000178597 |
| Eragrostis curvula | 4 | 1 | CH_ecu_302 | 4 | 7 | 0.000000359969 |
| Eragrostis curvula | Contig25 | 1 | CH_ecu_391 | 4 | 11 | 0.000003387 |
| Eragrostis curvula | 3 | 1 | CH_ecu_443 | 4 | 15 | 0.000013981 |
| Eragrostis curvula | Contig754 | 1 | CH_ecu_450 | 3 | 3 | 0.0000161007 |
| Eragrostis curvula | Contig50 | 1 | CH_ecu_451 | 3 | 3 | 0.0000161007 |
| Elaeis guineensis | EG5.1_Chr13 | 1 | CH_egu_25 | 4 | 4 | 0.0000000025534 |
| Elaeis guineensis | EG5.1_Chr15 | 1 | CH_egu_87 | 3 | 3 | 0.00000490021 |
| Glycine max | Gm13 | 1 | CH_gma_296 | 4 | 67 | 0.0000157489 |
| Hordeum vulgare | chr1H | 1 | CH_hvu_289 | 3 | 4 | 0.0000538925 |
| Musa acuminata | chr04 | 1 | CH_mac_59 | 3 | 3 | 0.000000406778 |
| Miscanthus sinensis | Chr05 | 1 | CH_msi_284 | 3 | 3 | 0.0000165782 |
| Miscanthus sinensis | Chr06 | 1 | CH_msi_42 | 6 | 9 | 0.000000000000293729 |
| Oryza alta | GWHAZTO00000007 | 1 | CH_oal_115 | 4 | 4 | 0.0000000111732 |
| Oryza alta | GWHAZTO00000006 | 1 | CH_oal_308 | 4 | 14 | 0.0000111338 |
| Oryza alta | GWHAZTO00000023 | 1 | CH_oal_309 | 4 | 14 | 0.0000111338 |
| Oryza alta | GWHAZTO00000023 | 1 | CH_oal_454 | 3 | 4 | 0.0000791733 |
| Oryza brachyantha | 7 | 1 | CH_obr_132 | 3 | 3 | 0.0000108331 |
| Oryza brachyantha | 6 | 1 | CH_obr_154 | 3 | 4 | 0.0000433106 |
| Oryza brachyantha | 8 | 1 | CH_obr_79 | 4 | 6 | 0.000000101821 |
| Oryza sativa ssp. indica | Chr11 | 1 | CH_osaindica_377 | 3 | 8 | 0.000581519 |
| Oryza sativa Kitaake | Chr12 | 1 | CH_osak_150 | 4 | 4 | 0.0000000315141 |
| Oryza sativa Kitaake | Chr8 | 1 | CH_osak_273 | 3 | 3 | 0.0000339311 |
| Oryza sativa Kitaake | Chr11 | 1 | CH_osak_51 | 6 | 6 | 0.000000000000024765 |
| Oryza sativa ssp. japonica | chr11 | 1 | CH_osa_227 | 3 | 4 | 0.0000611175 |
| Oropetium thomaeum | Chromosome_7 | 1 | CH_oth_6 | 6 | 6 | 7.05963e-17 |
| Phyllostachys edulis | hic_scaffold_10 | 1 | CH_ped_241 | 3 | 3 | 0.0000111942 |
| Phyllostachys edulis | hic_scaffold_3 | 1 | CH_ped_310 | 3 | 5 | 0.000111841 |
| Populus trichocarpa | Chr11 | 1 | CH_ptr_24 | 8 | 8 | 2.91575e-21 |
| Populus trichocarpa | Chr01 | 1 | CH_ptr_273 | 3 | 3 | 0.0000183118 |
| Populus trichocarpa | Chr03 | 1 | CH_ptr_54 | 9 | 48 | 0.00000000000000290541 |
| Sorghum bicolor | Chr03 | 1 | CH_sbi_95 | 4 | 4 | 0.00000000293537 |
| Secale cereale | GWHASIY00000002 | 1 | CH_sce_171 | 5 | 8 | 0.0000000116411 |
| Secale cereale | GWHASIY00000004 | 1 | CH_sce_333 | 4 | 6 | 0.0000023642 |
| Sequoiadendron giganteum | chr7 | 1 | CH_sgi_585 | 3 | 4 | 0.00000079731 |
| Setaria italica | scaffold_5 | 1 | CH_sit_145 | 4 | 6 | 0.000000154275 |
| Setaria italica | scaffold_5 | 1 | CH_sit_250 | 3 | 3 | 0.0000147821 |
| Solanum lycopersicum | SL4.0ch04 | 1 | CH_sly_140 | 4 | 4 | 0.0000000218153 |
| Solanum lycopersicum | SL4.0ch05 | 1 | CH_sly_162 | 4 | 5 | 0.000000109002 |
| Solanum lycopersicum | SL4.0ch10 | 1 | CH_sly_194 | 4 | 7 | 0.000000761964 |
| Solanum lycopersicum | SL4.0ch05 | 1 | CH_sly_220 | 4 | 9 | 0.0000027393 |
| Saccharum spontaneum | Chr3C | 1 | CH_ssp_534 | 3 | 3 | 0.0000147688 |
| Saccharum spontaneum | Chr6C | 1 | CH_ssp_535 | 3 | 3 | 0.0000147688 |
| Saccharum spontaneum | Chr2C | 1 | CH_ssp_536 | 3 | 3 | 0.0000147688 |
| Saccharum spontaneum | Chr3D | 1 | CH_ssp_636 | 3 | 4 | 0.0000590506 |
| Setaria viridis | Chr_05 | 1 | CH_svi_14 | 9 | 15 | 1.09047e-20 |
| Setaria viridis | Chr_05 | 1 | CH_svi_420 | 3 | 6 | 0.000404411 |
| Setaria viridis | Chr_06 | 1 | CH_svi_421 | 3 | 6 | 0.000404411 |
| Triticum aestivum | Chr3A | 1 | CH_tae_1179 | 3 | 3 | 0.000250483 |
| Triticum aestivum | Chr2B | 1 | CH_tae_1180 | 3 | 3 | 0.000250483 |
| Triticum aestivum | Chr3B | 1 | CH_tae_1181 | 3 | 3 | 0.000250483 |
| Triticum aestivum | Chr7D | 1 | CH_tae_598 | 5 | 12 | 0.000000335195 |
| Triticum aestivum | Chr2A | 1 | CH_tae_789 | 4 | 6 | 0.00000490975 |
| Triticum turgidum | chr2B | 1 | CH_ttu_263 | 4 | 5 | 0.000000497993 |
| Triticum turgidum | chr3A | 1 | CH_ttu_492 | 3 | 3 | 0.0000911288 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00078.1 | 1 | CH_zjn_56 | 3 | 3 | 0.00000167526 |
| Zea mays B73 | 3 | 1 | CH_zma_36 | 4 | 4 | 0.000000000198527 |
| Zostera marina | Chr03 | 1 | CH_zosmarina_152 | 3 | 8 | 0.00028445 |
| Zostera marina | Chr02 | 1 | CH_zosmarina_28 | 5 | 14 | 0.0000000026041 |
| Zostera marina | Chr04 | 1 | CH_zosmarina_83 | 3 | 3 | 0.00000509082 |
| Allium sativum | chr4 | 2 | CH_asa_10 | 10 | 19 | 2.36161e-23 |
| Allium sativum | chr1 | 2 | CH_asa_49 | 7 | 16 | 0.0000000000000204367 |
| Allium sativum | chr6 | 2 | CH_asa_666 | 3 | 6 | 0.000294465 |
| Aegilops tauschii | 3D | 2 | CH_ata_209 | 3 | 4 | 0.0000629091 |
| Amborella trichopoda | AmTr_v1.0_scaffold00065 | 2 | CH_atr_14 | 7 | 10 | 2.85065e-19 |
| Brachypodium distachyon | Bd2 | 2 | CH_bdi_346 | 3 | 9 | 0.000846114 |
| Calamus simplicifolius | scaffold144 | 2 | CH_calsi_108 | 4 | 5 | 0.00000192275 |
| Calamus simplicifolius | scaffold525 | 2 | CH_calsi_12 | 7 | 10 | 0.000000000000259019 |
| Calamus simplicifolius | scaffold147 | 2 | CH_calsi_142 | 4 | 9 | 0.0000481665 |
| Calamus simplicifolius | scaffold508 | 2 | CH_calsi_2 | 9 | 12 | 1.36498e-18 |
| Calamus simplicifolius | scaffold117 | 2 | CH_calsi_256 | 3 | 3 | 0.000208596 |
| Calamus simplicifolius | scaffold665 | 2 | CH_calsi_336 | 3 | 4 | 0.000833201 |
| Calamus simplicifolius | scaffold1122 | 2 | CH_calsi_5 | 9 | 19 | 5.67106e-16 |
| Calamus simplicifolius | scaffold129 | 2 | CH_calsi_84 | 4 | 4 | 0.000000385122 |
| Chara braunii | BFEA01000006 | 2 | CH_cbr_37 | 3 | 9 | 0.00000260654 |
| Cenchrus purpureus | GWHAORA00000007 | 2 | CH_cpu_194 | 5 | 6 | 0.00000000151709 |
| Cenchrus purpureus | GWHAORA00000001 | 2 | CH_cpu_373 | 5 | 16 | 0.00000109266 |
| Cenchrus purpureus | GWHAORA00000007 | 2 | CH_cpu_419 | 4 | 6 | 0.00000295318 |
| Cenchrus purpureus | GWHAORA00000007 | 2 | CH_cpu_654 | 3 | 3 | 0.000151946 |
| Cenchrus purpureus | GWHAORA00000003 | 2 | CH_cpu_655 | 3 | 3 | 0.000151946 |
| Cenchrus purpureus | GWHAORA00000003 | 2 | CH_cpu_656 | 3 | 3 | 0.000151946 |
| Cenchrus purpureus | GWHAORA00000010 | 2 | CH_cpu_715 | 5 | 44 | 0.000263634 |
| Dioscorea dumetorum | contig199 | 2 | CH_ddu_22 | 6 | 11 | 0.000000000000130869 |
| Dioscorea dumetorum | contig764 | 2 | CH_ddu_25 | 5 | 5 | 0.000000000000746586 |
| Dioscorea dumetorum | contig208 | 2 | CH_ddu_36 | 5 | 8 | 0.0000000000417648 |
| Digitaria exilis | Dexi_CM05836_chr05A | 2 | CH_dex_139 | 4 | 4 | 0.000000011341 |
| Digitaria exilis | Dexi_CM05836_chr02A | 2 | CH_dex_228 | 4 | 7 | 0.000000396327 |
| Digitaria exilis | Dexi_CM05836_chr05A | 2 | CH_dex_347 | 3 | 3 | 0.0000178597 |
| Digitaria exilis | Dexi_CM05836_chr06B | 2 | CH_dex_348 | 3 | 3 | 0.0000178597 |
| Digitaria exilis | Dexi_CM05836_chr07B | 2 | CH_dex_349 | 3 | 3 | 0.0000178597 |
| Eragrostis curvula | 4 | 2 | CH_ecu_302 | 4 | 7 | 0.000000359969 |
| Eragrostis curvula | Contig25 | 2 | CH_ecu_391 | 4 | 11 | 0.000003387 |
| Eragrostis curvula | 3 | 2 | CH_ecu_443 | 4 | 15 | 0.000013981 |
| Eragrostis curvula | Contig754 | 2 | CH_ecu_450 | 3 | 3 | 0.0000161007 |
| Eragrostis curvula | Contig50 | 2 | CH_ecu_451 | 3 | 3 | 0.0000161007 |
| Elaeis guineensis | EG5.1_Chr13 | 2 | CH_egu_25 | 4 | 4 | 0.0000000025534 |
| Elaeis guineensis | EG5.1_Chr15 | 2 | CH_egu_87 | 3 | 3 | 0.00000490021 |
| Glycine max | Gm13 | 2 | CH_gma_296 | 4 | 67 | 0.0000157489 |
| Hordeum vulgare | chr1H | 2 | CH_hvu_289 | 3 | 4 | 0.0000538925 |
| Musa acuminata | chr04 | 2 | CH_mac_59 | 3 | 3 | 0.000000406778 |
| Miscanthus sinensis | Chr05 | 2 | CH_msi_284 | 3 | 3 | 0.0000165782 |
| Miscanthus sinensis | Chr06 | 2 | CH_msi_42 | 6 | 9 | 0.000000000000293729 |
| Oryza alta | GWHAZTO00000007 | 2 | CH_oal_115 | 4 | 4 | 0.0000000111732 |
| Oryza alta | GWHAZTO00000006 | 2 | CH_oal_308 | 4 | 14 | 0.0000111338 |
| Oryza alta | GWHAZTO00000023 | 2 | CH_oal_309 | 4 | 14 | 0.0000111338 |
| Oryza alta | GWHAZTO00000023 | 2 | CH_oal_454 | 3 | 4 | 0.0000791733 |
| Oryza brachyantha | 7 | 2 | CH_obr_132 | 3 | 3 | 0.0000108331 |
| Oryza brachyantha | 6 | 2 | CH_obr_154 | 3 | 4 | 0.0000433106 |
| Oryza brachyantha | 8 | 2 | CH_obr_79 | 4 | 6 | 0.000000101821 |
| Oryza sativa ssp. indica | Chr11 | 2 | CH_osaindica_377 | 3 | 8 | 0.000581519 |
| Oryza sativa Kitaake | Chr12 | 2 | CH_osak_150 | 4 | 4 | 0.0000000315141 |
| Oryza sativa Kitaake | Chr8 | 2 | CH_osak_273 | 3 | 3 | 0.0000339311 |
| Oryza sativa Kitaake | Chr11 | 2 | CH_osak_51 | 6 | 6 | 0.000000000000024765 |
| Oryza sativa ssp. japonica | chr11 | 2 | CH_osa_227 | 3 | 4 | 0.0000611175 |
| Oropetium thomaeum | Chromosome_7 | 2 | CH_oth_6 | 6 | 6 | 7.05963e-17 |
| Phyllostachys edulis | hic_scaffold_10 | 2 | CH_ped_241 | 3 | 3 | 0.0000111942 |
| Phyllostachys edulis | hic_scaffold_3 | 2 | CH_ped_310 | 3 | 5 | 0.000111841 |
| Populus trichocarpa | Chr11 | 2 | CH_ptr_24 | 8 | 8 | 2.91575e-21 |
| Populus trichocarpa | Chr01 | 2 | CH_ptr_273 | 3 | 3 | 0.0000183118 |
| Populus trichocarpa | Chr03 | 2 | CH_ptr_54 | 9 | 48 | 0.00000000000000290541 |
| Sorghum bicolor | Chr03 | 2 | CH_sbi_95 | 4 | 4 | 0.00000000293537 |
| Secale cereale | GWHASIY00000002 | 2 | CH_sce_171 | 5 | 8 | 0.0000000116411 |
| Secale cereale | GWHASIY00000004 | 2 | CH_sce_333 | 4 | 6 | 0.0000023642 |
| Sequoiadendron giganteum | chr7 | 2 | CH_sgi_585 | 3 | 4 | 0.00000079731 |
| Setaria italica | scaffold_5 | 2 | CH_sit_145 | 4 | 6 | 0.000000154275 |
| Setaria italica | scaffold_5 | 2 | CH_sit_250 | 3 | 3 | 0.0000147821 |
| Solanum lycopersicum | SL4.0ch04 | 2 | CH_sly_140 | 4 | 4 | 0.0000000218153 |
| Solanum lycopersicum | SL4.0ch05 | 2 | CH_sly_162 | 4 | 5 | 0.000000109002 |
| Solanum lycopersicum | SL4.0ch10 | 2 | CH_sly_194 | 4 | 7 | 0.000000761964 |
| Solanum lycopersicum | SL4.0ch05 | 2 | CH_sly_220 | 4 | 9 | 0.0000027393 |
| Saccharum spontaneum | Chr3C | 2 | CH_ssp_534 | 3 | 3 | 0.0000147688 |
| Saccharum spontaneum | Chr6C | 2 | CH_ssp_535 | 3 | 3 | 0.0000147688 |
| Saccharum spontaneum | Chr2C | 2 | CH_ssp_536 | 3 | 3 | 0.0000147688 |
| Saccharum spontaneum | Chr3D | 2 | CH_ssp_636 | 3 | 4 | 0.0000590506 |
| Setaria viridis | Chr_05 | 2 | CH_svi_14 | 9 | 15 | 1.09047e-20 |
| Setaria viridis | Chr_05 | 2 | CH_svi_420 | 3 | 6 | 0.000404411 |
| Setaria viridis | Chr_06 | 2 | CH_svi_421 | 3 | 6 | 0.000404411 |
| Triticum aestivum | Chr3A | 2 | CH_tae_1179 | 3 | 3 | 0.000250483 |
| Triticum aestivum | Chr2B | 2 | CH_tae_1180 | 3 | 3 | 0.000250483 |
| Triticum aestivum | Chr3B | 2 | CH_tae_1181 | 3 | 3 | 0.000250483 |
| Triticum aestivum | Chr7D | 2 | CH_tae_598 | 5 | 12 | 0.000000335195 |
| Triticum aestivum | Chr2A | 2 | CH_tae_789 | 4 | 6 | 0.00000490975 |
| Triticum turgidum | chr2B | 2 | CH_ttu_263 | 4 | 5 | 0.000000497993 |
| Triticum turgidum | chr3A | 2 | CH_ttu_492 | 3 | 3 | 0.0000911288 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00078.1 | 2 | CH_zjn_56 | 3 | 3 | 0.00000167526 |
| Zea mays B73 | 3 | 2 | CH_zma_36 | 4 | 4 | 0.000000000198527 |
| Zostera marina | Chr03 | 2 | CH_zosmarina_152 | 3 | 8 | 0.00028445 |
| Zostera marina | Chr02 | 2 | CH_zosmarina_28 | 5 | 14 | 0.0000000026041 |
| Zostera marina | Chr04 | 2 | CH_zosmarina_83 | 3 | 3 | 0.00000509082 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |