Functional clusters
Information
- Type MapMan
- Description Enzyme classification.EC_2 transferases.EC_2.5 transferase transferring alkyl or aryl group, other than methyl group
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Asparagus officinalis | AsparagusV1_06 | 1 | CH_aof_15 | 4 | 9 | 0.0000000807156 |
| Allium sativum | chr7_2 | 1 | CH_asa_334 | 3 | 4 | 0.0000182329 |
| Brachypodium distachyon | Bd1 | 1 | CH_bdi_122 | 3 | 3 | 0.00000163149 |
| Cenchrus purpureus | GWHAORA00000004 | 1 | CH_cpu_128 | 7 | 41 | 0.0000000000410156 |
| Cenchrus purpureus | GWHAORA00000012 | 1 | CH_cpu_142 | 5 | 7 | 0.000000000122254 |
| Cenchrus purpureus | GWHAORA00000011 | 1 | CH_cpu_503 | 3 | 3 | 0.0000164568 |
| Digitaria exilis | Dexi_CM05836_chr04B | 1 | CH_dex_325 | 3 | 3 | 0.00000914096 |
| Digitaria exilis | Dexi_CM05836_chr04A | 1 | CH_dex_380 | 3 | 4 | 0.0000365495 |
| Eragrostis curvula | 6 | 1 | CH_ecu_757 | 3 | 12 | 0.000658145 |
| Miscanthus sinensis | Chr19 | 1 | CH_msi_102 | 4 | 4 | 0.00000000315131 |
| Miscanthus sinensis | Chr18 | 1 | CH_msi_116 | 5 | 18 | 0.0000000116817 |
| Oryza alta | GWHAZTO00000006 | 1 | CH_oal_218 | 3 | 3 | 0.000000810131 |
| Oryza sativa ssp. indica | Chr6 | 1 | CH_osaindica_357 | 3 | 19 | 0.000464311 |
| Oryza sativa Kitaake | Chr6 | 1 | CH_osak_101 | 4 | 4 | 0.000000000264824 |
| Oryza sativa ssp. japonica | chr06 | 1 | CH_osa_131 | 3 | 3 | 0.00000035144 |
| Phyllostachys edulis | hic_scaffold_17 | 1 | CH_ped_362 | 3 | 5 | 0.000193292 |
| Phyllostachys edulis | hic_scaffold_23 | 1 | CH_ped_419 | 3 | 6 | 0.000386376 |
| Panicum hallii | Chr04 | 1 | CH_pha_148 | 3 | 3 | 0.000000425498 |
| Physcomitrium patens | Chr23 | 1 | CH_ppa_70 | 3 | 6 | 0.000032188 |
| Populus trichocarpa | Chr05 | 1 | CH_ptr_214 | 3 | 3 | 0.000000826885 |
| Sorghum bicolor | Chr10 | 1 | CH_sbi_191 | 4 | 23 | 0.0000017639 |
| Setaria italica | scaffold_4 | 1 | CH_sit_107 | 4 | 7 | 0.000000010158 |
| Solanum lycopersicum | SL4.0ch11 | 1 | CH_sly_1 | 16 | 18 | 2.82252e-37 |
| Solanum lycopersicum | SL4.0ch08 | 1 | CH_sly_19 | 11 | 14 | 3.35913e-23 |
| Solanum lycopersicum | SL4.0ch01 | 1 | CH_sly_193 | 4 | 4 | 0.000000737359 |
| Solanum lycopersicum | SL4.0ch11 | 1 | CH_sly_23 | 15 | 74 | 1.73537e-21 |
| Solanum lycopersicum | SL4.0ch11 | 1 | CH_sly_31 | 11 | 28 | 1.93367e-18 |
| Solanum lycopersicum | SL4.0ch11 | 1 | CH_sly_64 | 10 | 54 | 0.00000000000109554 |
| Setaria viridis | Chr_04 | 1 | CH_svi_91 | 4 | 5 | 0.00000000105468 |
| Zea mays B73 | 9 | 1 | CH_zma_49 | 5 | 17 | 0.00000000367487 |
| Asparagus officinalis | AsparagusV1_06 | 2 | CH_aof_15 | 4 | 9 | 0.0000000807156 |
| Allium sativum | chr7_2 | 2 | CH_asa_334 | 3 | 4 | 0.0000182329 |
| Brachypodium distachyon | Bd1 | 2 | CH_bdi_122 | 3 | 3 | 0.00000163149 |
| Cenchrus purpureus | GWHAORA00000004 | 2 | CH_cpu_128 | 7 | 41 | 0.0000000000410156 |
| Cenchrus purpureus | GWHAORA00000012 | 2 | CH_cpu_142 | 5 | 7 | 0.000000000122254 |
| Cenchrus purpureus | GWHAORA00000011 | 2 | CH_cpu_503 | 3 | 3 | 0.0000164568 |
| Digitaria exilis | Dexi_CM05836_chr04B | 2 | CH_dex_325 | 3 | 3 | 0.00000914096 |
| Digitaria exilis | Dexi_CM05836_chr04A | 2 | CH_dex_380 | 3 | 4 | 0.0000365495 |
| Eragrostis curvula | 6 | 2 | CH_ecu_757 | 3 | 12 | 0.000658145 |
| Miscanthus sinensis | Chr19 | 2 | CH_msi_102 | 4 | 4 | 0.00000000315131 |
| Miscanthus sinensis | Chr18 | 2 | CH_msi_116 | 5 | 18 | 0.0000000116817 |
| Oryza alta | GWHAZTO00000006 | 2 | CH_oal_218 | 3 | 3 | 0.000000810131 |
| Oryza sativa ssp. indica | Chr6 | 2 | CH_osaindica_357 | 3 | 19 | 0.000464311 |
| Oryza sativa Kitaake | Chr6 | 2 | CH_osak_101 | 4 | 4 | 0.000000000264824 |
| Oryza sativa ssp. japonica | chr06 | 2 | CH_osa_131 | 3 | 3 | 0.00000035144 |
| Phyllostachys edulis | hic_scaffold_17 | 2 | CH_ped_362 | 3 | 5 | 0.000193292 |
| Phyllostachys edulis | hic_scaffold_23 | 2 | CH_ped_419 | 3 | 6 | 0.000386376 |
| Panicum hallii | Chr04 | 2 | CH_pha_148 | 3 | 3 | 0.000000425498 |
| Physcomitrium patens | Chr23 | 2 | CH_ppa_70 | 3 | 6 | 0.000032188 |
| Populus trichocarpa | Chr05 | 2 | CH_ptr_214 | 3 | 3 | 0.000000826885 |
| Sorghum bicolor | Chr10 | 2 | CH_sbi_191 | 4 | 23 | 0.0000017639 |
| Setaria italica | scaffold_4 | 2 | CH_sit_107 | 4 | 7 | 0.000000010158 |
| Solanum lycopersicum | SL4.0ch11 | 2 | CH_sly_1 | 16 | 18 | 2.82252e-37 |
| Solanum lycopersicum | SL4.0ch08 | 2 | CH_sly_19 | 11 | 14 | 3.35913e-23 |
| Solanum lycopersicum | SL4.0ch01 | 2 | CH_sly_193 | 4 | 4 | 0.000000737359 |
| Solanum lycopersicum | SL4.0ch11 | 2 | CH_sly_23 | 15 | 74 | 1.73537e-21 |
| Solanum lycopersicum | SL4.0ch11 | 2 | CH_sly_31 | 11 | 28 | 1.93367e-18 |
| Solanum lycopersicum | SL4.0ch11 | 2 | CH_sly_64 | 10 | 54 | 0.00000000000109554 |
| Setaria viridis | Chr_04 | 2 | CH_svi_91 | 4 | 5 | 0.00000000105468 |
| Zea mays B73 | 9 | 2 | CH_zma_49 | 5 | 17 | 0.00000000367487 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |